RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 IFRD1O00458 451 aaPredicted RBP18.65■□□□□ 0.58
LMNB1-202ENST00000395354 NR5A2O00482 541 aa18.65■□□□□ 0.58
LMNB1-202ENST00000395354 CLGNO14967 610 aa18.65■□□□□ 0.58
LMNB1-202ENST00000395354 RPN2P04844 631 aa18.65■□□□□ 0.58
LMNB1-202ENST00000395354 CASP2P42575 452 aa18.65■□□□□ 0.58
LMNB1-202ENST00000395354 CTSKP43235 329 aa18.65■□□□□ 0.58
LMNB1-202ENST00000395354 BNC1Q01954 994 aa18.65■□□□□ 0.58
LMNB1-202ENST00000395354 CHIT1Q13231 466 aa18.65■□□□□ 0.58
LMNB1-202ENST00000395354 RCAN2Q14206 197 aa18.65■□□□□ 0.58
LMNB1-202ENST00000395354 E2F2Q14209 437 aa18.65■□□□□ 0.58
LMNB1-202ENST00000395354 CPSF6Q16630 551 aaKnown RBP eCLIP18.65■□□□□ 0.58
LMNB1-202ENST00000395354 IMPG1Q17R60 797 aa18.65■□□□□ 0.58
LMNB1-202ENST00000395354 CCSMST1Q4G0I0 132 aa18.65■□□□□ 0.58
LMNB1-202ENST00000395354 ZNF542PQ5EBM4 170 aa18.65■□□□□ 0.58
LMNB1-202ENST00000395354 PIGGQ5H8A4 983 aa18.65■□□□□ 0.58
LMNB1-202ENST00000395354 METRNLQ641Q3 311 aa18.65■□□□□ 0.58
LMNB1-202ENST00000395354 C8orf82Q6P1X6 216 aaPredicted RBP18.65■□□□□ 0.58
LMNB1-202ENST00000395354 SLC23A3Q6PIS1 610 aa18.65■□□□□ 0.58
LMNB1-202ENST00000395354 FAM83HQ6ZRV2 1179 aaPredicted RBP18.65■□□□□ 0.58
LMNB1-202ENST00000395354 ZFAND4Q86XD8 727 aa18.65■□□□□ 0.58
LMNB1-202ENST00000395354 HID1Q8IV36 788 aa18.65■□□□□ 0.58
LMNB1-202ENST00000395354 PDXPQ96GD0 296 aa18.65■□□□□ 0.58
LMNB1-202ENST00000395354 CDRT15Q96T59 188 aa18.65■□□□□ 0.58
LMNB1-202ENST00000395354 ZDHHC5Q9C0B5 715 aa18.65■□□□□ 0.58
LMNB1-202ENST00000395354 ELOVL6Q9H5J4 265 aa18.65■□□□□ 0.58
LMNB1-202ENST00000395354 CARS2Q9HA77 564 aaKnown RBP18.65■□□□□ 0.58
LMNB1-202ENST00000395354 CAPN10Q9HC96 672 aa18.65■□□□□ 0.58
LMNB1-202ENST00000395354 SLC52A3Q9NQ40 469 aa18.65■□□□□ 0.58
LMNB1-202ENST00000395354 INTS7Q9NVH2 962 aaKnown RBP18.65■□□□□ 0.58
LMNB1-202ENST00000395354 EIF3LQ9Y262 564 aaKnown RBP18.65■□□□□ 0.58
LMNB1-202ENST00000395354 PCYT1BQ9Y5K3 369 aaPredicted RBP18.65■□□□□ 0.58
LMNB1-202ENST00000395354 ANGPT2O15123 496 aa18.64■□□□□ 0.58
LMNB1-202ENST00000395354 RSL1D1O76021 490 aaKnown RBP18.64■□□□□ 0.58
LMNB1-202ENST00000395354 PSMG1O95456 288 aa18.64■□□□□ 0.58
LMNB1-202ENST00000395354 TNFP01375 233 aa18.64■□□□□ 0.58
LMNB1-202ENST00000395354 HNF4AP41235 474 aa18.64■□□□□ 0.58
LMNB1-202ENST00000395354 HALP42357 657 aa18.64■□□□□ 0.58
LMNB1-202ENST00000395354 KCNK10P57789 538 aa18.64■□□□□ 0.58
LMNB1-202ENST00000395354 PSME3P61289 254 aa18.64■□□□□ 0.58
LMNB1-202ENST00000395354 IRF8Q02556 426 aa18.64■□□□□ 0.58
LMNB1-202ENST00000395354 CCDC6Q16204 474 aa18.64■□□□□ 0.58
LMNB1-202ENST00000395354 PYCR3Q53H96 274 aa18.64■□□□□ 0.58
LMNB1-202ENST00000395354 PRAMEF14Q5SWL7 426 aa18.64■□□□□ 0.58
LMNB1-202ENST00000395354 CAPN13Q6MZZ7 669 aaPredicted RBP18.64■□□□□ 0.58
LMNB1-202ENST00000395354 PRMT9Q6P2P2 845 aa18.64■□□□□ 0.58
LMNB1-202ENST00000395354 SELENOMQ8WWX9 145 aa18.64■□□□□ 0.58
LMNB1-202ENST00000395354 HOPXQ9BPY8 73 aaPredicted RBP18.64■□□□□ 0.58
LMNB1-202ENST00000395354 TIMM29Q9BSF4 260 aa18.64■□□□□ 0.58
LMNB1-202ENST00000395354 C1orf50Q9BV19 199 aa18.64■□□□□ 0.58
LMNB1-202ENST00000395354 LRTM1Q9HBL6 345 aa18.64■□□□□ 0.58
LMNB1-202ENST00000395354 C1orf109Q9NX04 203 aa18.64■□□□□ 0.58
LMNB1-202ENST00000395354 BCAP29Q9UHQ4 241 aa18.64■□□□□ 0.58
LMNB1-202ENST00000395354 KLF15Q9UIH9 416 aa18.64■□□□□ 0.58
LMNB1-202ENST00000395354 CROTQ9UKG9 612 aa18.64■□□□□ 0.58
LMNB1-202ENST00000395354 ACSL5Q9ULC5 683 aa18.64■□□□□ 0.58
LMNB1-202ENST00000395354 POMPQ9Y244 141 aa18.64■□□□□ 0.58
LMNB1-202ENST00000395354 GPSM3Q9Y4H4 160 aa18.64■□□□□ 0.58
LMNB1-202ENST00000395354 PCDHGA7Q9Y5G6 932 aa18.64■□□□□ 0.58
LMNB1-202ENST00000395354 DGKBQ9Y6T7 804 aa18.64■□□□□ 0.58
LMNB1-202ENST00000395354 ZFC3H1O60293 1989 aaKnown RBP18.64■□□□□ 0.57
LMNB1-202ENST00000395354 A0A1W2PP18 115 aa18.64■□□□□ 0.57
LMNB1-202ENST00000395354 SCAMP1O15126 338 aa18.64■□□□□ 0.57
LMNB1-202ENST00000395354 FKBP6O75344 327 aa18.64■□□□□ 0.57
LMNB1-202ENST00000395354 PDE5AO76074 875 aa18.64■□□□□ 0.57
LMNB1-202ENST00000395354 RASGRP1O95267 797 aa18.64■□□□□ 0.57
LMNB1-202ENST00000395354 PDYNP01213 254 aa18.64■□□□□ 0.57
LMNB1-202ENST00000395354 SLC2A4P14672 509 aa18.64■□□□□ 0.57
LMNB1-202ENST00000395354 ACPPP15309 386 aa18.64■□□□□ 0.57
LMNB1-202ENST00000395354 BLKP51451 505 aa18.64■□□□□ 0.57
LMNB1-202ENST00000395354 PNLIPRP1P54315 467 aa18.64■□□□□ 0.57
LMNB1-202ENST00000395354 ZNF423Q2M1K9 1284 aa18.64■□□□□ 0.57
LMNB1-202ENST00000395354 PLA2G4EQ3MJ16 856 aa18.64■□□□□ 0.57
LMNB1-202ENST00000395354 RFTN2Q52LD8 501 aaPredicted RBP18.64■□□□□ 0.57
LMNB1-202ENST00000395354 IL23RQ5VWK5 629 aa18.64■□□□□ 0.57
LMNB1-202ENST00000395354 FRG2Q64ET8 278 aa18.64■□□□□ 0.57
LMNB1-202ENST00000395354 GRHL2Q6ISB3 625 aa18.64■□□□□ 0.57
LMNB1-202ENST00000395354 AAGABQ6PD74 315 aa18.64■□□□□ 0.57
LMNB1-202ENST00000395354 CYP20A1Q6UW02 462 aa18.64■□□□□ 0.57
LMNB1-202ENST00000395354 HPS6Q86YV9 775 aa18.64■□□□□ 0.57
LMNB1-202ENST00000395354 ZNF480Q8WV37 535 aa18.64■□□□□ 0.57
LMNB1-202ENST00000395354 RAD51AP1Q96B01 352 aa18.64■□□□□ 0.57
LMNB1-202ENST00000395354 SPDL1Q96EA4 605 aa18.64■□□□□ 0.57
LMNB1-202ENST00000395354 MED8Q96G25 268 aa18.64■□□□□ 0.57
LMNB1-202ENST00000395354 FRG2BQ96QU4 278 aa18.64■□□□□ 0.57
LMNB1-202ENST00000395354 SGPP1Q9BX95 441 aa18.64■□□□□ 0.57
LMNB1-202ENST00000395354 SMOC1Q9H4F8 434 aa18.64■□□□□ 0.57
LMNB1-202ENST00000395354 ERVMER34-1Q9H9K5 563 aa18.64■□□□□ 0.57
LMNB1-202ENST00000395354 FSCN3Q9NQT6 498 aa18.64■□□□□ 0.57
LMNB1-202ENST00000395354 FARSBQ9NSD9 589 aaKnown RBP18.64■□□□□ 0.57
LMNB1-202ENST00000395354 GID8Q9NWU2 228 aa18.64■□□□□ 0.57
LMNB1-202ENST00000395354 SLC23A2Q9UGH3 650 aa18.64■□□□□ 0.57
LMNB1-202ENST00000395354 GMEB2Q9UKD1 530 aa18.64■□□□□ 0.57
LMNB1-202ENST00000395354 KCNE2Q9Y6J6 123 aa18.64■□□□□ 0.57
LMNB1-202ENST00000395354 TDRD6O60522 2096 aaKnown RBP18.63■□□□□ 0.57
LMNB1-202ENST00000395354 KRT87PA6NCN2 255 aa18.63■□□□□ 0.57
LMNB1-202ENST00000395354 KHNYNO15037 678 aaKnown RBP18.63■□□□□ 0.57
LMNB1-202ENST00000395354 CFLARO15519 480 aa18.63■□□□□ 0.57
LMNB1-202ENST00000395354 PRAMEF4O60810 478 aa18.63■□□□□ 0.57
LMNB1-202ENST00000395354 CSF2P04141 144 aa18.63■□□□□ 0.57
LMNB1-202ENST00000395354 JUNDP17535 347 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms