RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 ITCHQ96J02 903 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 ASB16Q96NS5 453 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 LGR4Q9BXB1 951 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 TMEM121BQ9BXQ6 578 aaPredicted RBP15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 RIMKLBQ9ULI2 386 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 ZNF451Q9Y4E5 1061 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 H7C0S8 307 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 CXCR6O00574 342 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 PENKP01210 267 aaPredicted RBP15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 ASLP04424 464 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 ACADVLP49748 655 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 TAS2R50P59544 299 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 FAM91A1Q658Y4 838 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 TRAM1L1Q8N609 369 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 BPIFB6Q8NFQ5 453 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 VN1R2Q8NFZ6 395 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 ASB11Q8WXH4 323 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 RPF2Q9H7B2 306 aaKnown RBP15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 AASSQ9UDR5 926 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 FBXW2Q9UKT8 454 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 TTC28Q96AY4 2481 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 PRAMEF33A0A0G2JMD5 474 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 A0A1B0GTW7 788 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 CLIC1O00299 241 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 NME6O75414 186 aaPredicted RBP15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 LAMP1P11279 417 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 SLC7A1P30825 629 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 ACTR1BP42025 376 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 RNF144AP50876 292 aaPredicted RBP15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 SUOXP51687 545 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 ACTR1AP61163 376 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 DGCR6Q14129 220 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 ZDHHC20Q5W0Z9 365 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 ZCCHC10Q8TBK6 192 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 SH3GL1Q99961 368 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 SFXN1Q9H9B4 322 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 LIN28AQ9H9Z2 209 aaKnown RBP15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 VCX3AQ9NNX9 186 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 AASDHPPTQ9NRN7 309 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 SUCOQ9UBS9 1254 aaKnown RBP15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 FADS3Q9Y5Q0 445 aa15.4■□□□□ 0.06
SMARCD1-202ENST00000394963 KLF8O95600 359 aaPredicted RBP15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 GNAO1P09471 354 aa15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 SSR2P43308 183 aa15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 OR1E2P47887 323 aa15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 LSM3P62310 102 aaKnown RBP15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 C1orf61Q13536 156 aa15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 RBM44Q6ZP01 1051 aaKnown RBP15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 DTWD1Q8N5C7 304 aa15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 LEMD2Q8NC56 503 aa15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 TSACCQ96A04 125 aaPredicted RBP15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 RAD51AP1Q96B01 352 aa15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 ZNF707Q96C28 371 aaPredicted RBP15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 PPCDCQ96CD2 204 aa15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 SLC12A9Q9BXP2 914 aa15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 FAM32AQ9Y421 112 aaKnown RBP15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 ZNF236Q9UL36 1845 aa15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 H3BNX3 289 aa15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 GALNT1Q10472 559 aaPredicted RBP15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 BNIP2Q12982 314 aa15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 DMC1Q14565 340 aa15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 CST6Q15828 149 aa15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 ZNF555Q8NEP9 628 aa15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 RLN3Q8WXF3 142 aa15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 UHRF1Q96T88 793 aaPredicted RBP15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 DUSP26Q9BV47 211 aa15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 CPEB1Q9BZB8 566 aaKnown RBP15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 CEP44Q9C0F1 390 aa15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 PDP2Q9P2J9 529 aa15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 PCDHB14Q9Y5E9 798 aa15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 PCDHGA11Q9Y5H2 935 aa15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 GVINP1Q7Z2Y8 2422 aa15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 AK4P27144 223 aaPredicted RBP15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 IDH2P48735 452 aaKnown RBP15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 HTRA4P83105 476 aaPredicted RBP15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 PAGE2BQ5JRK9 111 aa15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 ADCY4Q8NFM4 1077 aa15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 NELL1Q92832 810 aa15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 F2RL3Q96RI0 385 aa15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 PHPT1Q9NRX4 125 aaPredicted RBP15.39■□□□□ 0.05
SMARCD1-202ENST00000394963 SNAP29O95721 258 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 MANFP55145 182 aaKnown RBP15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 ITPRIPL2Q3MIP1 535 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 TLDC1Q6P9B6 456 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 VTCN1Q7Z7D3 282 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 GALNT13Q8IUC8 556 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 TSPAN14Q8NG11 270 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 VANGL1Q8TAA9 524 aaPredicted RBP15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 WFIKKN2Q8TEU8 576 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 ZNF480Q8WV37 535 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 ARMC5Q96C12 935 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 OTUB2Q96DC9 234 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 C9orf16Q9BUW7 83 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 DPEP2Q9H4A9 486 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 ZDHHC7Q9NXF8 308 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 ZIM2Q9NZV7 527 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 SERGEFQ9UGK8 458 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 TMPRSS11EQ9UL52 423 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 DOCK4Q8N1I0 1966 aa15.38■□□□□ 0.05
SMARCD1-202ENST00000394963 H0Y8X5 98 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms