RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 ORAI3Q9BRQ5 295 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 TUT1Q9H6E5 874 aaKnown RBP13.11□□□□□ -0.31
USP49-203ENST00000394253 COQ10BQ9H8M1 238 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 ZNF286AQ9HBT8 521 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 RLIMQ9NVW2 624 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 GPRC5BQ9NZH0 403 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 LOC100130705A0A1B0GUX0 176 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 C5orf60A6NFR6 353 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 ARGFXA6NJG6 315 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 HSD11B2P80365 405 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 HSPB3Q12988 150 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 PTCHD3Q3KNS1 767 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 PCDHGA5Q9Y5G8 931 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 ATG2BQ96BY7 2078 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 KCNJ13O60928 360 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 LGR5O75473 907 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 OR8U9P0C7N5 309 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 SMYD5Q6GMV2 418 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 CREB3L2Q70SY1 520 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 OR8S1Q8NH09 359 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 MITD1Q8WV92 249 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 NT5C1B-RDH14C9J2C7 533 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 TRUB2O95900 331 aaKnown RBP13.11□□□□□ -0.31
USP49-203ENST00000394253 CETPP11597 493 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 CD9P21926 228 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 ACTBP60709 375 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 ACTG1P63261 375 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 NIPAL4Q0D2K0 466 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 FAM171A1Q5VUB5 890 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 SCIMPQ6UWF3 145 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 ZNF662Q6ZS27 426 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 ASB9Q96DX5 294 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 ADAD1Q96M93 576 aaKnown RBP13.11□□□□□ -0.31
USP49-203ENST00000394253 OR4K3Q96R72 315 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 PSD2Q9BQI7 771 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 ASPNQ9BXN1 380 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 PRDM4Q9UKN5 801 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 RNF6Q9Y252 685 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 ADAM18Q9Y3Q7 739 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 WDR62O43379 1518 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 COL15A1P39059 1388 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 C2orf78A6NCI8 922 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 ERBB2P04626 1255 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 ZSCAN5DPP0CG00 497 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 MED27Q6P2C8 311 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 FAM151BQ6UXP7 276 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 DPPA2Q7Z7J5 298 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 EXOSC8Q96B26 276 aaKnown RBP13.11□□□□□ -0.31
USP49-203ENST00000394253 SLC6A7Q99884 636 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 SEMA6CQ9H3T2 930 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 PXMP2Q9NR77 195 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 SCDO00767 359 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 TREHO43280 583 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 ETFAP13804 333 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 BMP8BP34820 402 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 BDH1Q02338 343 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 HMGN3Q15651 99 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 ATAT1Q5SQI0 421 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 MLIPQ5VWP3 458 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 BMP8AQ7Z5Y6 402 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 REPS2Q8NFH8 660 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 CASTOR1Q8WTX7 329 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 RAB9BQ9NP90 201 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 PPP1R14DQ9NXH3 145 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 ZNF609O15014 1411 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 TNS3Q68CZ2 1445 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 NKRFO15226 690 aaKnown RBP eCLIP13.11□□□□□ -0.31
USP49-203ENST00000394253 PSEN2P49810 448 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 ZNF425Q6IV72 752 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 UNQ6126/PRO20091Q6UXV3 157 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 APOLD1Q96LR9 279 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 BTBD1Q9H0C5 482 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 GHRLQ9UBU3 117 aa13.11□□□□□ -0.31
USP49-203ENST00000394253 NPIPA5E9PKD4 350 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 PIP5K1BO14986 540 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 INPPL1O15357 1258 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 CDRT1O95170 752 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 DIRAS3O95661 229 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 AVPR1BP47901 424 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 MC2RQ01718 297 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 HES5Q5TA89 166 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 DUPD1Q68J44 220 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 ZNF410Q86VK4 478 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 SAMD12Q8N8I0 201 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 KCNJ16Q9NPI9 418 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 ZMAT5Q9UDW3 170 aaKnown RBP13.1□□□□□ -0.31
USP49-203ENST00000394253 NPIPA1Q9UND3 350 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 A0A1B0GVI7 797 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 ADH1CP00326 375 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 ZNF136P52737 540 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 GBE1Q04446 702 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 ITPK1Q13572 414 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 NAPRTQ6XQN6 538 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 DPY19L4Q7Z388 723 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 RAVER1Q8IY67 606 aaKnown RBP13.1□□□□□ -0.31
USP49-203ENST00000394253 CHTF18Q8WVB6 975 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 TVP23BQ9NYZ1 205 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 FLRT1Q9NZU1 646 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 SAMD9Q5K651 1589 aa13.1□□□□□ -0.31
USP49-203ENST00000394253 UNC13AQ9UPW8 1703 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms