RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 ZC3HC1Q86WB0 502 aaKnown RBP29.41■■■□□ 2.3
CMTM4-202ENST00000394106 ZNF592Q92610 1267 aa29.41■■■□□ 2.3
CMTM4-202ENST00000394106 CCDC177Q9NQR7 707 aaPredicted RBP29.41■■■□□ 2.3
CMTM4-202ENST00000394106 UTP6Q9NYH9 597 aaKnown RBP29.41■■■□□ 2.3
CMTM4-202ENST00000394106 FAM95CA0A1B0GW59 222 aa29.4■■■□□ 2.3
CMTM4-202ENST00000394106 HYKKA2RU49 373 aa29.4■■■□□ 2.3
CMTM4-202ENST00000394106 MKRN2OSH3BPM6 223 aa29.4■■■□□ 2.3
CMTM4-202ENST00000394106 KLF7O75840 302 aaPredicted RBP29.4■■■□□ 2.3
CMTM4-202ENST00000394106 OTX2P32243 289 aa29.4■■■□□ 2.3
CMTM4-202ENST00000394106 FOLR3P41439 243 aa29.4■■■□□ 2.3
CMTM4-202ENST00000394106 ABATP80404 500 aa29.4■■■□□ 2.3
CMTM4-202ENST00000394106 PHKG1Q16816 387 aa29.4■■■□□ 2.3
CMTM4-202ENST00000394106 PTRH1Q86Y79 214 aaKnown RBP29.4■■■□□ 2.3
CMTM4-202ENST00000394106 APLFQ8IW19 511 aaPredicted RBP29.4■■■□□ 2.3
CMTM4-202ENST00000394106 METTL27Q8N6F8 245 aaPredicted RBP29.4■■■□□ 2.3
CMTM4-202ENST00000394106 ALKBH8Q96BT7 664 aaKnown RBP29.4■■■□□ 2.3
CMTM4-202ENST00000394106 TRIM55Q9BYV6 548 aa29.4■■■□□ 2.3
CMTM4-202ENST00000394106 NSMCE4AQ9NXX6 385 aa29.4■■■□□ 2.3
CMTM4-202ENST00000394106 TLK1Q9UKI8 766 aa29.4■■■□□ 2.3
CMTM4-202ENST00000394106 CCDC88CQ9P219 2028 aa29.4■■■□□ 2.3
CMTM4-202ENST00000394106 FITM1A5D6W6 292 aa29.39■■■□□ 2.3
CMTM4-202ENST00000394106 PABPN1LA6NDY0 278 aaKnown RBP29.39■■■□□ 2.3
CMTM4-202ENST00000394106 H0YGG7 62 aa29.39■■■□□ 2.3
CMTM4-202ENST00000394106 SLC28A2O43868 658 aa29.39■■■□□ 2.3
CMTM4-202ENST00000394106 HIST1H2AGP0C0S8 130 aaPredicted RBP29.39■■■□□ 2.3
CMTM4-202ENST00000394106 HIST1H2ADP20671 130 aa29.39■■■□□ 2.3
CMTM4-202ENST00000394106 ITGAXP20702 1163 aa29.39■■■□□ 2.3
CMTM4-202ENST00000394106 FOXL2P58012 376 aa29.39■■■□□ 2.3
CMTM4-202ENST00000394106 ARF3P61204 181 aaPredicted RBP29.39■■■□□ 2.3
CMTM4-202ENST00000394106 TBPL1P62380 186 aa29.39■■■□□ 2.3
CMTM4-202ENST00000394106 CAV1Q03135 178 aa29.39■■■□□ 2.3
CMTM4-202ENST00000394106 TRADDQ15628 312 aa29.39■■■□□ 2.3
CMTM4-202ENST00000394106 FAM214AQ32MH5 1076 aa29.39■■■□□ 2.3
CMTM4-202ENST00000394106 ZNF425Q6IV72 752 aa29.39■■■□□ 2.3
CMTM4-202ENST00000394106 CCDC25Q86WR0 208 aa29.39■■■□□ 2.3
CMTM4-202ENST00000394106 HIST1H2AHQ96KK5 128 aa29.39■■■□□ 2.3
CMTM4-202ENST00000394106 HIST1H2AJQ99878 128 aa29.39■■■□□ 2.3
CMTM4-202ENST00000394106 H2AFJQ9BTM1 129 aa29.39■■■□□ 2.3
CMTM4-202ENST00000394106 ATG10Q9H0Y0 220 aa29.39■■■□□ 2.3
CMTM4-202ENST00000394106 SMYD2Q9NRG4 433 aa29.39■■■□□ 2.3
CMTM4-202ENST00000394106 ENAMQ9NRM1 1142 aa29.39■■■□□ 2.3
CMTM4-202ENST00000394106 SLC22A11Q9NSA0 550 aa29.39■■■□□ 2.3
CMTM4-202ENST00000394106 CUEDC1Q9NWM3 386 aaPredicted RBP29.39■■■□□ 2.3
CMTM4-202ENST00000394106 ANKRD12Q6UB98 2062 aa29.38■■■□□ 2.29
CMTM4-202ENST00000394106 HEATR5BQ9P2D3 2071 aa29.38■■■□□ 2.29
CMTM4-202ENST00000394106 BOD1L1Q8NFC6 3051 aa29.38■■■□□ 2.29
CMTM4-202ENST00000394106 CNOT3O75175 753 aaKnown RBP29.38■■■□□ 2.29
CMTM4-202ENST00000394106 CD63P08962 238 aa29.38■■■□□ 2.29
CMTM4-202ENST00000394106 LACTB2Q53H82 288 aaPredicted RBP29.38■■■□□ 2.29
CMTM4-202ENST00000394106 PRAMEF13Q5VWM6 474 aa29.38■■■□□ 2.29
CMTM4-202ENST00000394106 AGTRAPQ6RW13 159 aa29.38■■■□□ 2.29
CMTM4-202ENST00000394106 RAB43Q86YS6 212 aa29.38■■■□□ 2.29
CMTM4-202ENST00000394106 DTWD1Q8N5C7 304 aa29.38■■■□□ 2.29
CMTM4-202ENST00000394106 ZDHHC19Q8WVZ1 309 aaPredicted RBP29.38■■■□□ 2.29
CMTM4-202ENST00000394106 ACSS2Q9NR19 701 aa29.38■■■□□ 2.29
CMTM4-202ENST00000394106 TP53TG5Q9Y2B4 290 aa29.38■■■□□ 2.29
CMTM4-202ENST00000394106 PIM1P11309 404 aaPredicted RBP29.37■■■□□ 2.29
CMTM4-202ENST00000394106 SLC7A5Q01650 507 aa29.37■■■□□ 2.29
CMTM4-202ENST00000394106 ZNF460Q14592 562 aa29.37■■■□□ 2.29
CMTM4-202ENST00000394106 C8orf74Q6P047 294 aa29.37■■■□□ 2.29
CMTM4-202ENST00000394106 MRPL14Q6P1L8 145 aaKnown RBP29.37■■■□□ 2.29
CMTM4-202ENST00000394106 FBXO25Q8TCJ0 367 aa29.37■■■□□ 2.29
CMTM4-202ENST00000394106 TRIM54Q9BYV2 358 aa29.37■■■□□ 2.29
CMTM4-202ENST00000394106 ING2Q9H160 280 aa29.37■■■□□ 2.29
CMTM4-202ENST00000394106 SYNPO2LQ9H987 977 aa29.37■■■□□ 2.29
CMTM4-202ENST00000394106 ARL15Q9NXU5 204 aa29.37■■■□□ 2.29
CMTM4-202ENST00000394106 MAU2Q9Y6X3 613 aa29.37■■■□□ 2.29
CMTM4-202ENST00000394106 ZNF462Q96JM2 2506 aa29.37■■■□□ 2.29
CMTM4-202ENST00000394106 H7BY64 318 aa29.36■■■□□ 2.29
CMTM4-202ENST00000394106 HAT1O14929 419 aa29.36■■■□□ 2.29
CMTM4-202ENST00000394106 MED26O95402 600 aa29.36■■■□□ 2.29
CMTM4-202ENST00000394106 EZRP15311 586 aaKnown RBP29.36■■■□□ 2.29
CMTM4-202ENST00000394106 NR1D1P20393 614 aa29.36■■■□□ 2.29
CMTM4-202ENST00000394106 OR1D4P47884 311 aa29.36■■■□□ 2.29
CMTM4-202ENST00000394106 NAE1Q13564 534 aa29.36■■■□□ 2.29
CMTM4-202ENST00000394106 ATP1A4Q13733 1029 aa29.36■■■□□ 2.29
CMTM4-202ENST00000394106 TMEM207Q6UWW9 146 aa29.36■■■□□ 2.29
CMTM4-202ENST00000394106 PLD3Q8IV08 490 aa29.36■■■□□ 2.29
CMTM4-202ENST00000394106 CSNK1A1LQ8N752 337 aa29.36■■■□□ 2.29
CMTM4-202ENST00000394106 OR2Y1Q8NGV0 311 aa29.36■■■□□ 2.29
CMTM4-202ENST00000394106 CDKL2Q92772 493 aa29.36■■■□□ 2.29
CMTM4-202ENST00000394106 RERGQ96A58 199 aaPredicted RBP29.36■■■□□ 2.29
CMTM4-202ENST00000394106 CABS1Q96KC9 395 aa29.36■■■□□ 2.29
CMTM4-202ENST00000394106 PRAP1Q96NZ9 151 aa29.36■■■□□ 2.29
CMTM4-202ENST00000394106 RHOJQ9H4E5 214 aa29.36■■■□□ 2.29
CMTM4-202ENST00000394106 ESYT3A0FGR9 886 aa29.35■■■□□ 2.29
CMTM4-202ENST00000394106 CXorf49A8MYA2 514 aaPredicted RBP29.35■■■□□ 2.29
CMTM4-202ENST00000394106 ZNF37AP17032 561 aaPredicted RBP29.35■■■□□ 2.29
CMTM4-202ENST00000394106 CCL11P51671 97 aa29.35■■■□□ 2.29
CMTM4-202ENST00000394106 TAS2R39P59534 338 aa29.35■■■□□ 2.29
CMTM4-202ENST00000394106 SSPNQ14714 243 aa29.35■■■□□ 2.29
CMTM4-202ENST00000394106 WHAMMP3Q1A5X7 153 aa29.35■■■□□ 2.29
CMTM4-202ENST00000394106 ZDHHC24Q6UX98 284 aa29.35■■■□□ 2.29
CMTM4-202ENST00000394106 C3orf62Q6ZUJ4 267 aa29.35■■■□□ 2.29
CMTM4-202ENST00000394106 OVCH1Q7RTY7 1134 aa29.35■■■□□ 2.29
CMTM4-202ENST00000394106 TMEM151BQ8IW70 566 aa29.35■■■□□ 2.29
CMTM4-202ENST00000394106 FKBP10Q96AY3 582 aa29.35■■■□□ 2.29
CMTM4-202ENST00000394106 VPS39Q96JC1 886 aa29.35■■■□□ 2.29
CMTM4-202ENST00000394106 LRRC1Q9BTT6 524 aa29.35■■■□□ 2.29
CMTM4-202ENST00000394106 PCBD2Q9H0N5 130 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms