RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 TLR4O00206 839 aa8.39□□□□□ -1.07
GABRA1-202ENST00000393943 CRYZL1O95825 349 aa8.39□□□□□ -1.07
GABRA1-202ENST00000393943 JUNDP17535 347 aa8.39□□□□□ -1.07
GABRA1-202ENST00000393943 THPOP40225 353 aa8.39□□□□□ -1.07
GABRA1-202ENST00000393943 CAPZA2P47755 286 aa8.39□□□□□ -1.07
GABRA1-202ENST00000393943 MAPK12P53778 367 aa8.39□□□□□ -1.07
GABRA1-202ENST00000393943 SNRPD1P62314 119 aaKnown RBP8.39□□□□□ -1.07
GABRA1-202ENST00000393943 ADAM15Q13444 863 aa8.39□□□□□ -1.07
GABRA1-202ENST00000393943 KCNC3Q14003 757 aa8.39□□□□□ -1.07
GABRA1-202ENST00000393943 RUNDC3AQ59EK9 446 aa8.39□□□□□ -1.07
GABRA1-202ENST00000393943 ENPP6Q6UWR7 440 aa8.39□□□□□ -1.07
GABRA1-202ENST00000393943 SERPINA9Q86WD7 417 aa8.39□□□□□ -1.07
GABRA1-202ENST00000393943 RNF130Q86XS8 419 aa8.39□□□□□ -1.07
GABRA1-202ENST00000393943 SLC22A17Q8WUG5 538 aa8.39□□□□□ -1.07
GABRA1-202ENST00000393943 ANKRD49Q8WVL7 239 aa8.39□□□□□ -1.07
GABRA1-202ENST00000393943 FUBP1Q96AE4 644 aaKnown RBP8.39□□□□□ -1.07
GABRA1-202ENST00000393943 MOCOSQ96EN8 888 aa8.39□□□□□ -1.07
GABRA1-202ENST00000393943 METTL2AQ96IZ6 378 aaKnown RBP8.39□□□□□ -1.07
GABRA1-202ENST00000393943 MGLLQ99685 303 aa8.39□□□□□ -1.07
GABRA1-202ENST00000393943 PAQR5Q9NXK6 330 aaPredicted RBP8.39□□□□□ -1.07
GABRA1-202ENST00000393943 VPS51Q9UID3 782 aa8.39□□□□□ -1.07
GABRA1-202ENST00000393943 MGAT4BQ9UQ53 548 aa8.39□□□□□ -1.07
GABRA1-202ENST00000393943 ITM2BQ9Y287 266 aa8.39□□□□□ -1.07
GABRA1-202ENST00000393943 PRG3Q9Y2Y8 225 aaPredicted RBP8.39□□□□□ -1.07
GABRA1-202ENST00000393943 MYO18AQ92614 2054 aaKnown RBP8.39□□□□□ -1.07
GABRA1-202ENST00000393943 A0A0G2JLL6 359 aaPredicted RBP8.38□□□□□ -1.07
GABRA1-202ENST00000393943 A0A1W2PRG6 482 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 PGRMC2O15173 223 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 ACSL4O60488 711 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 PLOD3O60568 738 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 NIPSNAP2O75323 286 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 GLUD1P00367 558 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 ANXA4P09525 319 aaPredicted RBP8.38□□□□□ -1.07
GABRA1-202ENST00000393943 SEMA3BQ13214 749 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 ELOAQ14241 798 aaKnown RBP8.38□□□□□ -1.07
GABRA1-202ENST00000393943 PRRT2Q7Z6L0 340 aaPredicted RBP8.38□□□□□ -1.07
GABRA1-202ENST00000393943 C2orf69Q8N8R5 385 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 C2orf15Q8WU43 125 aaKnown RBP8.38□□□□□ -1.07
GABRA1-202ENST00000393943 KHSRPQ92945 711 aaKnown RBP eCLIP8.38□□□□□ -1.07
GABRA1-202ENST00000393943 MED8Q96G25 268 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 DOHHQ9BU89 302 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 BPIFA1Q9NP55 256 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 IL1RAPQ9NPH3 570 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 POLR3BQ9NW08 1133 aaPredicted RBP8.38□□□□□ -1.07
GABRA1-202ENST00000393943 KIAA0513O60268 411 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 CPNE3O75131 537 aaKnown RBP8.38□□□□□ -1.07
GABRA1-202ENST00000393943 PSKH1P11801 424 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 ARRB2P32121 409 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 CSTF2P33240 577 aaKnown RBP eCLIP8.38□□□□□ -1.07
GABRA1-202ENST00000393943 MAP2K3P46734 347 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 FCGRTP55899 365 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 TGM3Q08188 693 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 HSPA14Q0VDF9 509 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 KRT33BQ14525 404 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 TRIM71Q2Q1W2 868 aaKnown RBP8.38□□□□□ -1.07
GABRA1-202ENST00000393943 CCDC157Q569K6 752 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 FRG2Q64ET8 278 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 GET4Q7L5D6 327 aaPredicted RBP8.38□□□□□ -1.07
GABRA1-202ENST00000393943 EEF1AKMT1Q8WVE0 214 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 PTERQ96BW5 349 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 AP2M1Q96CW1 435 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 B3GALT6Q96L58 329 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 C3orf30Q96M34 536 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 KCNC2Q96PR1 638 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 FRG2BQ96QU4 278 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 CRTAC1Q9NQ79 661 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 FZD4Q9ULV1 537 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 PCDHB9Q9Y5E1 797 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 COL5A3P25940 1745 aaPredicted RBP8.38□□□□□ -1.07
GABRA1-202ENST00000393943 SYN3O14994 580 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 PRKYO43930 277 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 TLR5O60602 858 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 HLA-DPB1P04440 258 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 IFNA16P05015 189 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 FYNP06241 537 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 IRF1P10914 325 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 ATF6P18850 670 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 CD9P21926 228 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 GABRB3P28472 473 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 GTF2E2P29084 291 aaKnown RBP8.38□□□□□ -1.07
GABRA1-202ENST00000393943 TGFBR2P37173 567 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 KCNC4Q03721 635 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 PIGFQ07326 219 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 HEPACAMQ14CZ8 416 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 TOR1AIP1Q5JTV8 583 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 AMIGO3Q86WK7 504 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 PJA1Q8NG27 643 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 DNAJA4Q8WW22 397 aaPredicted RBP8.38□□□□□ -1.07
GABRA1-202ENST00000393943 AKAP1Q92667 903 aaKnown RBP eCLIP8.38□□□□□ -1.07
GABRA1-202ENST00000393943 PLD4Q96BZ4 506 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 YIPF2Q9BWQ6 316 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 SLITRK2Q9H156 845 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 RABL2AQ9UBK7 228 aaPredicted RBP8.38□□□□□ -1.07
GABRA1-202ENST00000393943 VPS29Q9UBQ0 182 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 RABL2BQ9UNT1 228 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 STRCQ7RTU9 1775 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 A0A075B6Q4 140 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 PROM1O43490 865 aa8.38□□□□□ -1.07
GABRA1-202ENST00000393943 AKAP8O43823 692 aaKnown RBP8.38□□□□□ -1.07
GABRA1-202ENST00000393943 CYP7B1O75881 506 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms