RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 TCFL5Q9UL49 500 aa12.14□□□□□ -0.47
GGPS1-203ENST00000391855 A0A0J9YVX5 310 aa12.13□□□□□ -0.47
GGPS1-203ENST00000391855 CDC14CA4D256 554 aa12.13□□□□□ -0.47
GGPS1-203ENST00000391855 TXNDC9O14530 226 aa12.13□□□□□ -0.47
GGPS1-203ENST00000391855 DSCR3O14972 297 aa12.13□□□□□ -0.47
GGPS1-203ENST00000391855 CTSVO60911 334 aa12.13□□□□□ -0.47
GGPS1-203ENST00000391855 CAPN1P07384 714 aa12.13□□□□□ -0.47
GGPS1-203ENST00000391855 POLE2P56282 527 aa12.13□□□□□ -0.47
GGPS1-203ENST00000391855 TAS2R39P59534 338 aa12.13□□□□□ -0.47
GGPS1-203ENST00000391855 SLC7A5Q01650 507 aa12.13□□□□□ -0.47
GGPS1-203ENST00000391855 GUCY2DQ02846 1103 aa12.13□□□□□ -0.47
GGPS1-203ENST00000391855 C19orf57Q0VDD7 668 aa12.13□□□□□ -0.47
GGPS1-203ENST00000391855 LY6DQ14210 128 aa12.13□□□□□ -0.47
GGPS1-203ENST00000391855 DEFB109BQ30KR1 87 aa12.13□□□□□ -0.47
GGPS1-203ENST00000391855 NKAIN1Q4KMZ8 207 aa12.13□□□□□ -0.47
GGPS1-203ENST00000391855 ADAMTSL2Q86TH1 951 aa12.13□□□□□ -0.47
GGPS1-203ENST00000391855 RAB43Q86YS6 212 aa12.13□□□□□ -0.47
GGPS1-203ENST00000391855 CEP112Q8N8E3 955 aa12.13□□□□□ -0.47
GGPS1-203ENST00000391855 PPFIBP2Q8ND30 876 aa12.13□□□□□ -0.47
GGPS1-203ENST00000391855 IP6K3Q96PC2 410 aa12.13□□□□□ -0.47
GGPS1-203ENST00000391855 GPR22Q99680 433 aa12.13□□□□□ -0.47
GGPS1-203ENST00000391855 RBBP8Q99708 897 aa12.13□□□□□ -0.47
GGPS1-203ENST00000391855 SGPP1Q9BX95 441 aa12.13□□□□□ -0.47
GGPS1-203ENST00000391855 GPAMQ9HCL2 828 aa12.13□□□□□ -0.47
GGPS1-203ENST00000391855 SMYD2Q9NRG4 433 aa12.13□□□□□ -0.47
GGPS1-203ENST00000391855 CUTCQ9NTM9 273 aa12.13□□□□□ -0.47
GGPS1-203ENST00000391855 ZDHHC18Q9NUE0 388 aa12.13□□□□□ -0.47
GGPS1-203ENST00000391855 ARL15Q9NXU5 204 aa12.13□□□□□ -0.47
GGPS1-203ENST00000391855 IFT80Q9P2H3 777 aaPredicted RBP12.13□□□□□ -0.47
GGPS1-203ENST00000391855 DHCR7Q9UBM7 475 aaKnown RBP12.13□□□□□ -0.47
GGPS1-203ENST00000391855 NDOR1Q9UHB4 597 aa12.13□□□□□ -0.47
GGPS1-203ENST00000391855 MAN2B2Q9Y2E5 1009 aa12.13□□□□□ -0.47
GGPS1-203ENST00000391855 ESYT3A0FGR9 886 aa12.12□□□□□ -0.47
GGPS1-203ENST00000391855 PRPF4O43172 522 aaKnown RBP eCLIP12.12□□□□□ -0.471e-6■■■□□ 16.7
GGPS1-203ENST00000391855 ONECUT2O95948 504 aa12.12□□□□□ -0.47
GGPS1-203ENST00000391855 SAT1P21673 171 aa12.12□□□□□ -0.47
GGPS1-203ENST00000391855 PHBP35232 272 aa12.12□□□□□ -0.47
GGPS1-203ENST00000391855 SPRP35270 261 aaPredicted RBP12.12□□□□□ -0.47
GGPS1-203ENST00000391855 VSX2P58304 361 aaPredicted RBP12.12□□□□□ -0.47
GGPS1-203ENST00000391855 GPX6P59796 221 aa12.12□□□□□ -0.47
GGPS1-203ENST00000391855 CDKL1Q00532 357 aa12.12□□□□□ -0.47
GGPS1-203ENST00000391855 KCNAB2Q13303 367 aa12.12□□□□□ -0.47
GGPS1-203ENST00000391855 PHKG1Q16816 387 aa12.12□□□□□ -0.47
GGPS1-203ENST00000391855 MUM1Q2TAK8 710 aa12.12□□□□□ -0.47
GGPS1-203ENST00000391855 GRTP1Q5TC63 336 aa12.12□□□□□ -0.47
GGPS1-203ENST00000391855 C1orf189Q5VU69 101 aa12.12□□□□□ -0.47
GGPS1-203ENST00000391855 GARNL3Q5VVW2 1013 aa12.12□□□□□ -0.47
GGPS1-203ENST00000391855 CAPN13Q6MZZ7 669 aaPredicted RBP12.12□□□□□ -0.47
GGPS1-203ENST00000391855 PRMT9Q6P2P2 845 aa12.12□□□□□ -0.47
GGPS1-203ENST00000391855 LCTLQ6UWM7 567 aa12.12□□□□□ -0.47
GGPS1-203ENST00000391855 TTLL10Q6ZVT0 673 aa12.12□□□□□ -0.47
GGPS1-203ENST00000391855 ADCK2Q7Z695 626 aa12.12□□□□□ -0.47
GGPS1-203ENST00000391855 C17orf64Q86WR6 236 aa12.12□□□□□ -0.47
GGPS1-203ENST00000391855 CTAGE3PQ8IX95 158 aa12.12□□□□□ -0.47
GGPS1-203ENST00000391855 EXD3Q8N9H8 876 aa12.12□□□□□ -0.47
GGPS1-203ENST00000391855 RERGQ96A58 199 aaPredicted RBP12.12□□□□□ -0.47
GGPS1-203ENST00000391855 FBXL8Q96CD0 374 aa12.12□□□□□ -0.47
GGPS1-203ENST00000391855 MVB12AQ96EY5 273 aa12.12□□□□□ -0.47
GGPS1-203ENST00000391855 RUFY1Q96T51 708 aa12.12□□□□□ -0.47
GGPS1-203ENST00000391855 HAUS8Q9BT25 410 aa12.12□□□□□ -0.47
GGPS1-203ENST00000391855 LRRC4CQ9HCJ2 640 aa12.12□□□□□ -0.47
GGPS1-203ENST00000391855 TMEM184CQ9NVA4 438 aa12.12□□□□□ -0.47
GGPS1-203ENST00000391855 NXT1Q9UKK6 140 aaKnown RBP12.12□□□□□ -0.47
GGPS1-203ENST00000391855 IGKV1-8A0A0C4DH67 115 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 IGHEP01854 428 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 C1QAP02745 245 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 ALBP02768 609 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 CTSBP07858 339 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 FAM87AP0C7U9 286 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 STMN1P16949 149 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 FOLR3P41439 243 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 PMS2P54278 862 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 RPS18P62269 152 aaKnown RBP12.11□□□□□ -0.47
GGPS1-203ENST00000391855 NAE1Q13564 534 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 USP10Q14694 798 aaKnown RBP12.11□□□□□ -0.47
GGPS1-203ENST00000391855 TRADDQ15628 312 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 PRTGQ2VWP7 1150 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 KBTBD12Q3ZCT8 623 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 WASHC2DQ5SRD0 308 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 ATP1A1-AS1Q5TC04 95 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 FRMPD2BQ6IN97 320 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 LCN10Q6JVE6 187 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 SBSNQ6UWP8 590 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 RELL1Q8IUW5 271 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 APLFQ8IW19 511 aaPredicted RBP12.11□□□□□ -0.47
GGPS1-203ENST00000391855 ADAMTS17Q8TE56 1095 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 THAP11Q96EK4 314 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 DERL2Q9GZP9 239 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 WDR54Q9H977 334 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 CDC14AQ9UNH5 594 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 KCNMB2Q9Y691 235 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 SPTBP11277 2137 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 IGSF10Q6WRI0 2623 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 PCM1Q15154 2024 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 HYKKA2RU49 373 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 CXorf49A8MYA2 514 aaPredicted RBP12.11□□□□□ -0.47
GGPS1-203ENST00000391855 H0YGG7 62 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 RFPL1O75677 317 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 C1QL1O75973 258 aa12.11□□□□□ -0.47
GGPS1-203ENST00000391855 WISP3O95389 354 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms