RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 RAPGEFL1Q9UHV5 662 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 PCTPQ9UKL6 214 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 LOC285095A0A1B0GVY8 99 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 CENPBD1B2RD01 187 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 H3BM21 787 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 C1QCP02747 245 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 PRKACBP22694 351 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 SSTR4P31391 388 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 CDK10Q15131 360 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 CYP27C1Q4G0S4 372 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 PDE12Q6L8Q7 609 aaKnown RBP13.47□□□□□ -0.25
SDC1-202ENST00000381150 RNF180Q86T96 592 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 C11orf74Q86VG3 221 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 CACTIN-AS1Q8N1I8 211 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 OR5H6Q8NGV6 325 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 KIAA1191Q96A73 305 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 PYURFQ96I23 114 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 GFM1Q96RP9 751 aaKnown RBP13.47□□□□□ -0.25
SDC1-202ENST00000381150 TFB2MQ9H5Q4 396 aaKnown RBP13.47□□□□□ -0.25
SDC1-202ENST00000381150 REEP1Q9H902 201 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 SNTG1Q9NSN8 517 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 IMPAD1Q9NX62 359 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 ZNF490Q9ULM2 529 aaPredicted RBP13.47□□□□□ -0.25
SDC1-202ENST00000381150 ATXN1LP0C7T5 689 aaKnown RBP13.47□□□□□ -0.25
SDC1-202ENST00000381150 GBX1Q14549 363 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 MAD2L1BPQ15013 274 aaPredicted RBP13.47□□□□□ -0.25
SDC1-202ENST00000381150 TYSND1Q2T9J0 566 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 RFX4Q33E94 735 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 CTXN3Q4LDR2 81 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 PNCKQ6P2M8 343 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 ZNF621Q6ZSS3 439 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 ZNF438Q7Z4V0 828 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 SPPL2AQ8TCT8 520 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 RHBDF1Q96CC6 855 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 RAD18Q9NS91 495 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 FBXL12Q9NXK8 326 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 PCDH10Q9P2E7 1040 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 MALT1Q9UDY8 824 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 SATB2Q9UPW6 733 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 KIAA0513O60268 411 aa13.46□□□□□ -0.25
SDC1-202ENST00000381150 POLR2EP19388 210 aaKnown RBP13.46□□□□□ -0.25
SDC1-202ENST00000381150 PPP3CCP48454 512 aa13.46□□□□□ -0.25
SDC1-202ENST00000381150 GALK2Q01415 458 aa13.46□□□□□ -0.25
SDC1-202ENST00000381150 TAF10Q12962 218 aa13.46□□□□□ -0.25
SDC1-202ENST00000381150 KRR1Q13601 381 aaKnown RBP13.46□□□□□ -0.25
SDC1-202ENST00000381150 CPZQ66K79 652 aa13.46□□□□□ -0.25
SDC1-202ENST00000381150 NADSYN1Q6IA69 706 aa13.46□□□□□ -0.25
SDC1-202ENST00000381150 OR2T5Q6IEZ7 315 aa13.46□□□□□ -0.25
SDC1-202ENST00000381150 GALNT7Q86SF2 657 aa13.46□□□□□ -0.25
SDC1-202ENST00000381150 CYP4Z2PQ8N1L4 340 aa13.46□□□□□ -0.25
SDC1-202ENST00000381150 KBTBD8Q8NFY9 601 aa13.46□□□□□ -0.25
SDC1-202ENST00000381150 OR2T29Q8NH02 315 aa13.46□□□□□ -0.25
SDC1-202ENST00000381150 ZNF675Q8TD23 568 aa13.46□□□□□ -0.25
SDC1-202ENST00000381150 SNAPC3Q92966 411 aa13.46□□□□□ -0.25
SDC1-202ENST00000381150 INPP5KQ9BT40 448 aa13.46□□□□□ -0.25
SDC1-202ENST00000381150 AARSD1Q9BTE6 412 aaKnown RBP13.46□□□□□ -0.25
SDC1-202ENST00000381150 BTBD2Q9BX70 525 aa13.46□□□□□ -0.25
SDC1-202ENST00000381150 ACTL8Q9H568 366 aa13.46□□□□□ -0.25
SDC1-202ENST00000381150 DUSP21Q9H596 190 aa13.46□□□□□ -0.25
SDC1-202ENST00000381150 MARCH5Q9NX47 278 aa13.46□□□□□ -0.25
SDC1-202ENST00000381150 SLC25A37Q9NYZ2 338 aa13.46□□□□□ -0.25
SDC1-202ENST00000381150 AGO1Q9UL18 857 aaKnown RBP13.46□□□□□ -0.25
SDC1-202ENST00000381150 CDH23Q9H251 3354 aa13.46□□□□□ -0.25
SDC1-202ENST00000381150 PABPN1LA6NDY0 278 aaKnown RBP13.46□□□□□ -0.25
SDC1-202ENST00000381150 EVPLLA8MZ36 301 aa13.46□□□□□ -0.25
SDC1-202ENST00000381150 SMLR1H3BR10 107 aa13.46□□□□□ -0.25
SDC1-202ENST00000381150 LDB2O43679 373 aa13.46□□□□□ -0.25
SDC1-202ENST00000381150 VPS26AO75436 327 aa13.46□□□□□ -0.25
SDC1-202ENST00000381150 ZDHHC11BP0C7U3 371 aa13.46□□□□□ -0.25
SDC1-202ENST00000381150 TNFRSF1BP20333 461 aa13.46□□□□□ -0.25
SDC1-202ENST00000381150 RYKP34925 604 aa13.46□□□□□ -0.25
SDC1-202ENST00000381150 IL12RB1P42701 662 aa13.46□□□□□ -0.25
SDC1-202ENST00000381150 IL2P60568 153 aa13.46□□□□□ -0.25
SDC1-202ENST00000381150 SERINC3Q13530 473 aa13.46□□□□□ -0.25
SDC1-202ENST00000381150 RUNDC3AQ59EK9 446 aa13.46□□□□□ -0.25
SDC1-202ENST00000381150 TJAP1Q5JTD0 557 aa13.46□□□□□ -0.25
SDC1-202ENST00000381150 FAM171A1Q5VUB5 890 aa13.46□□□□□ -0.25
SDC1-202ENST00000381150 TMEM161AQ9NX61 479 aa13.46□□□□□ -0.25
SDC1-202ENST00000381150 STMN3Q9NZ72 180 aa13.46□□□□□ -0.25
SDC1-202ENST00000381150 DSCR3O14972 297 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 MUSKO15146 869 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 ALX3O95076 343 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 DDX5P17844 614 aaKnown RBP13.45□□□□□ -0.26
SDC1-202ENST00000381150 TSTQ16762 297 aaKnown RBP13.45□□□□□ -0.26
SDC1-202ENST00000381150 NATD1Q8N6N6 113 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 GLB1L3Q8NCI6 653 aaPredicted RBP13.45□□□□□ -0.26
SDC1-202ENST00000381150 PCNPQ8WW12 178 aaKnown RBP13.45□□□□□ -0.26
SDC1-202ENST00000381150 PIK3R3Q92569 461 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 GTF2H4Q92759 462 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 CASD1Q96PB1 797 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 NSUN3Q9H649 340 aaKnown RBP13.45□□□□□ -0.26
SDC1-202ENST00000381150 C1orf109Q9NX04 203 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 MARCH2Q9P0N8 246 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 HCSTQ9UBK5 93 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 MAU2Q9Y6X3 613 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 OR2A25A4D2G3 310 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 MTMR11A4FU01 709 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 ARHGEF9O43307 516 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 DNAJB5O75953 348 aa13.45□□□□□ -0.26
SDC1-202ENST00000381150 SCELO95171 688 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms