RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 MBTPS2O43462 519 aa19.17■□□□□ 0.66
PDLIM5-205ENST00000380180 SH3BGRLO75368 114 aa19.17■□□□□ 0.66
PDLIM5-205ENST00000380180 ATP6V1B2P21281 511 aa19.17■□□□□ 0.66
PDLIM5-205ENST00000380180 CD72P21854 359 aa19.17■□□□□ 0.66
PDLIM5-205ENST00000380180 PEX2P28328 305 aa19.17■□□□□ 0.66
PDLIM5-205ENST00000380180 EEFSECP57772 596 aaKnown RBP19.17■□□□□ 0.66
PDLIM5-205ENST00000380180 PHC1P78364 1004 aa19.17■□□□□ 0.66
PDLIM5-205ENST00000380180 SLBPQ14493 270 aaKnown RBP eCLIP19.17■□□□□ 0.66
PDLIM5-205ENST00000380180 CAPRIN2Q6IMN6 1127 aaKnown RBP19.17■□□□□ 0.66
PDLIM5-205ENST00000380180 IZUMO2Q6UXV1 221 aa19.17■□□□□ 0.66
PDLIM5-205ENST00000380180 LILRA2Q8N149 483 aa19.17■□□□□ 0.66
PDLIM5-205ENST00000380180 EFCAB11Q9BUY7 163 aa19.17■□□□□ 0.66
PDLIM5-205ENST00000380180 RMI1Q9H9A7 625 aa19.17■□□□□ 0.66
PDLIM5-205ENST00000380180 GEMIN8Q9NWZ8 242 aaKnown RBP19.17■□□□□ 0.66
PDLIM5-205ENST00000380180 PLEKHM1Q9Y4G2 1056 aa19.17■□□□□ 0.66
PDLIM5-205ENST00000380180 TRIOBPQ9H2D6 2365 aa19.17■□□□□ 0.66
PDLIM5-205ENST00000380180 LRATO95237 230 aa19.16■□□□□ 0.66
PDLIM5-205ENST00000380180 C7P10643 843 aa19.16■□□□□ 0.66
PDLIM5-205ENST00000380180 ACADSP16219 412 aa19.16■□□□□ 0.66
PDLIM5-205ENST00000380180 PCSK2P16519 638 aa19.16■□□□□ 0.66
PDLIM5-205ENST00000380180 NDUFV2P19404 249 aa19.16■□□□□ 0.66
PDLIM5-205ENST00000380180 GRIA3P42263 894 aa19.16■□□□□ 0.66
PDLIM5-205ENST00000380180 CLNS1AP54105 237 aaKnown RBP19.16■□□□□ 0.66
PDLIM5-205ENST00000380180 SF1Q15637 639 aaKnown RBP19.16■□□□□ 0.66
PDLIM5-205ENST00000380180 PYCR3Q53H96 274 aa19.16■□□□□ 0.66
PDLIM5-205ENST00000380180 EOGTQ5NDL2 527 aa19.16■□□□□ 0.66
PDLIM5-205ENST00000380180 PRAMEF14Q5SWL7 426 aa19.16■□□□□ 0.66
PDLIM5-205ENST00000380180 PRAMEF13Q5VWM6 474 aa19.16■□□□□ 0.66
PDLIM5-205ENST00000380180 NXPE4Q6UWF7 544 aa19.16■□□□□ 0.66
PDLIM5-205ENST00000380180 RIMKLAQ8IXN7 391 aa19.16■□□□□ 0.66
PDLIM5-205ENST00000380180 PLCD3Q8N3E9 789 aa19.16■□□□□ 0.66
PDLIM5-205ENST00000380180 GFM2Q969S9 779 aaKnown RBP19.16■□□□□ 0.66
PDLIM5-205ENST00000380180 C11orf24Q96F05 449 aaPredicted RBP19.16■□□□□ 0.66
PDLIM5-205ENST00000380180 KCTD14Q9BQ13 255 aaPredicted RBP19.16■□□□□ 0.66
PDLIM5-205ENST00000380180 TIMM29Q9BSF4 260 aa19.16■□□□□ 0.66
PDLIM5-205ENST00000380180 BTBD1Q9H0C5 482 aa19.16■□□□□ 0.66
PDLIM5-205ENST00000380180 TRIT1Q9H3H1 467 aaKnown RBP19.16■□□□□ 0.66
PDLIM5-205ENST00000380180 EHD1Q9H4M9 534 aa19.16■□□□□ 0.66
PDLIM5-205ENST00000380180 PRM3Q9NNZ6 103 aa19.16■□□□□ 0.66
PDLIM5-205ENST00000380180 VAPAQ9P0L0 249 aa19.16■□□□□ 0.66
PDLIM5-205ENST00000380180 ACTR3BQ9P1U1 418 aa19.16■□□□□ 0.66
PDLIM5-205ENST00000380180 PPT2Q9UMR5 302 aa19.16■□□□□ 0.66
PDLIM5-205ENST00000380180 SUFUQ9UMX1 484 aa19.16■□□□□ 0.66
PDLIM5-205ENST00000380180 KCNK6Q9Y257 313 aa19.16■□□□□ 0.66
PDLIM5-205ENST00000380180 NEUROG3Q9Y4Z2 214 aa19.16■□□□□ 0.66
PDLIM5-205ENST00000380180 AP4S1Q9Y587 144 aa19.16■□□□□ 0.66
PDLIM5-205ENST00000380180 CACNB4O00305 520 aaPredicted RBP19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 ERGP11308 486 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 ACSL1P33121 698 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 RPS13P62277 151 aaKnown RBP19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 MEF2AQ02078 507 aaPredicted RBP19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 ACSM2AQ08AH3 577 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 CCINQ13939 588 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 SELPLGQ14242 412 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 CMPK2Q5EBM0 449 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 ACSM2BQ68CK6 577 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 DUS1LQ6P1R4 473 aaKnown RBP19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 LCTLQ6UWM7 567 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 SPPL2CQ8IUH8 684 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 TBC1D21Q8IYX1 336 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 OR2T34Q8NGX1 318 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 SLCO4A1Q96BD0 722 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 REPS1Q96D71 796 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 DUS3LQ96G46 650 aaKnown RBP19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 PKP2Q99959 881 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 KLHL4Q9C0H6 718 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 RIMS3Q9UJD0 308 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 RUVBL1Q9Y265 456 aaKnown RBP19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 GPSM3Q9Y4H4 160 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 PIPSLA2A3N6 862 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 POM121BA6NF01 834 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 DFNA5O60443 496 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 S100A3P33764 101 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 MTPNP58546 118 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 ARHGAP19Q14CB8 494 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 LRIT3Q3SXY7 679 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 FBXO43Q4G163 708 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 PAGE2BQ5JRK9 111 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 PTRH1Q86Y79 214 aaKnown RBP19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 SYT12Q8IV01 421 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 LAS2Q8IYD9 372 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 ASB12Q8WXK4 309 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 FAM3CQ92520 227 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 TESCQ96BS2 214 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 METTL2AQ96IZ6 378 aaKnown RBP19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 C12orf66Q96MD2 445 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 INSM2Q96T92 566 aaPredicted RBP19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 ECSITQ9BQ95 431 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 MENTQ9BUN1 341 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 ACAT2Q9BWD1 397 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 SPNS1Q9H2V7 528 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 PIF1Q9H611 641 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 MCM8Q9UJA3 840 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 USP22Q9UPT9 525 aa19.15■□□□□ 0.66
PDLIM5-205ENST00000380180 GLULP15104 373 aa19.14■□□□□ 0.65
PDLIM5-205ENST00000380180 SLC7A1P30825 629 aa19.14■□□□□ 0.65
PDLIM5-205ENST00000380180 SOX11P35716 441 aa19.14■□□□□ 0.65
PDLIM5-205ENST00000380180 TPMTP51580 245 aa19.14■□□□□ 0.65
PDLIM5-205ENST00000380180 CLDN2P57739 230 aa19.14■□□□□ 0.65
PDLIM5-205ENST00000380180 SMAD4Q13485 552 aaKnown RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms