RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 UGT2B11O75310 529 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 ANGPTL1O95841 491 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 ATP1B2P14415 290 aaPredicted RBP10.6□□□□□ -0.71
BEST1-201ENST00000378043 JUPP14923 745 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 ACPPP15309 386 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 ZNF12P17014 697 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 HOXA9P31269 272 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 HNRNPFP52597 415 aaKnown RBP10.6□□□□□ -0.71
BEST1-201ENST00000378043 IL5RAQ01344 420 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 GTF2H3Q13889 308 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 DUOXA1Q1HG43 343 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 VMACQ2NL98 169 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 CAPN13Q6MZZ7 669 aaPredicted RBP10.6□□□□□ -0.71
BEST1-201ENST00000378043 BTLAQ7Z6A9 289 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 METTL3Q86U44 580 aaKnown RBP10.6□□□□□ -0.71
BEST1-201ENST00000378043 HOMEZQ8IX15 550 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 CLECL1Q8IZS7 167 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 FAM9CQ8IZT9 166 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 PGBD3Q8N328 593 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 SCAMP4Q969E2 229 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 C11orf24Q96F05 449 aaPredicted RBP10.6□□□□□ -0.71
BEST1-201ENST00000378043 TMEM169Q96HH4 297 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 COX4I2Q96KJ9 171 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 PANX1Q96RD7 426 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 MYOCQ99972 504 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 CCDC90BQ9GZT6 254 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 DUSP21Q9H596 190 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 ZDHHC6Q9H6R6 413 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 DNAJC11Q9NVH1 559 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 ERVK-18Q9QC07 812 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 LSM7Q9UK45 103 aaKnown RBP10.6□□□□□ -0.71
BEST1-201ENST00000378043 ZNF510Q9Y2H8 683 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 SNX5Q9Y5X3 404 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 PCM1Q15154 2024 aa10.6□□□□□ -0.71
BEST1-201ENST00000378043 ZNF99A8MXY4 864 aaPredicted RBP10.59□□□□□ -0.71
BEST1-201ENST00000378043 FPGTO14772 594 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 TEX28O15482 410 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 NDUFS2O75306 463 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 SULT1C4O75897 302 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 MPC1LP0DKB6 136 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 HOXB6P17509 224 aaKnown RBP10.59□□□□□ -0.71
BEST1-201ENST00000378043 PRPS1L1P21108 318 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 KDELR2P33947 212 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 IDUAP35475 653 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 OPRL1P41146 370 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 HALP42357 657 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 TRPC1P48995 793 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 CRYBA2P53672 197 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 SLC35A2P78381 396 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 SLC7A9P82251 487 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 GSTM4Q03013 218 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 IQCCQ4KMZ1 466 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 SPOUT1Q5T280 376 aaKnown RBP10.59□□□□□ -0.71
BEST1-201ENST00000378043 C16orf87Q6PH81 154 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 MSANTD1Q6ZTZ1 278 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 CCDC71Q8IV32 467 aaPredicted RBP10.59□□□□□ -0.71
BEST1-201ENST00000378043 CHST14Q8NCH0 376 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 BBS2Q9BXC9 721 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 TM9SF3Q9HD45 589 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 PALMDQ9NP74 551 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 SH3BP1Q9Y3L3 701 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 PCDHGA10Q9Y5H3 936 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 ORC6Q9Y5N6 252 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 TMEM202A6NGA9 273 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 EVPLLA8MZ36 301 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 FUCA1P04066 466 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 JUNDP17535 347 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 EFNA1P20827 205 aaPredicted RBP10.59□□□□□ -0.71
BEST1-201ENST00000378043 MAPK1P28482 360 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 NR1D2Q14995 579 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 SMN1Q16637 294 aaKnown RBP10.59□□□□□ -0.71
BEST1-201ENST00000378043 ADNP2Q6IQ32 1131 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 IGFN1Q86VF2 1251 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 TMC8Q8IU68 726 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 CENPSQ8N2Z9 138 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 ELMOD1Q8N336 334 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 WDR20Q8TBZ3 569 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 MCOLN3Q8TDD5 553 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 CSGALNACT1Q8TDX6 532 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 CHPT1Q8WUD6 406 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 MYLIPQ8WY64 445 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 NELL1Q92832 810 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 FOXJ1Q92949 421 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 POP5Q969H6 163 aaKnown RBP10.59□□□□□ -0.71
BEST1-201ENST00000378043 UBE2FQ969M7 185 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 MTERF1Q99551 399 aaKnown RBP10.59□□□□□ -0.71
BEST1-201ENST00000378043 HERC2P3Q9BVR0 1158 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 CPEB1Q9BZB8 566 aaKnown RBP10.59□□□□□ -0.71
BEST1-201ENST00000378043 RIBC2Q9H4K1 309 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 SIRT5Q9NXA8 310 aa10.59□□□□□ -0.71
BEST1-201ENST00000378043 MYO1GB0I1T2 1018 aa10.58□□□□□ -0.72
BEST1-201ENST00000378043 BOLA2-SMG1P6H3BVE0 249 aa10.58□□□□□ -0.72
BEST1-201ENST00000378043 DNAJB5O75953 348 aa10.58□□□□□ -0.72
BEST1-201ENST00000378043 LAMP1P11279 417 aa10.58□□□□□ -0.72
BEST1-201ENST00000378043 MAP2K4P45985 399 aa10.58□□□□□ -0.72
BEST1-201ENST00000378043 MASP1P48740 699 aa10.58□□□□□ -0.72
BEST1-201ENST00000378043 SP140Q13342 867 aa10.58□□□□□ -0.72
BEST1-201ENST00000378043 PLEKHS1Q5SXH7 462 aa10.58□□□□□ -0.72
BEST1-201ENST00000378043 ZNF621Q6ZSS3 439 aa10.58□□□□□ -0.72
BEST1-201ENST00000378043 SYT12Q8IV01 421 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms