RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 ZFYVE19Q96K21 471 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 ZNF558Q96NG5 402 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 CDK15Q96Q40 435 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 SEMA3CQ99985 751 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 SLC25A51Q9H1U9 297 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 ATP13A1Q9HD20 1204 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 CCNB1IP1Q9NPC3 277 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 HEBP1Q9NRV9 189 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 DCAF13Q9NV06 445 aaKnown RBP12.57□□□□□ -0.4
MSH5-204ENST00000375755 PCTPQ9UKL6 214 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 A3GALT2U3KPV4 340 aa12.57□□□□□ -0.4
MSH5-204ENST00000375755 MROH6A6NGR9 719 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 PRRG1O14668 218 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 MED26O95402 600 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 CTSKP43235 329 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 PPP3CCP48454 512 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 HTR6P50406 440 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 RENBPP51606 427 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 CPZQ66K79 652 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 TXNDC8Q6A555 127 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 NEK5Q6P3R8 708 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 SPRED2Q7Z698 418 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 DNAJB7Q7Z6W7 309 aaPredicted RBP12.56□□□□□ -0.4
MSH5-204ENST00000375755 MSRB3Q8IXL7 192 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 C2orf15Q8WU43 125 aaKnown RBP12.56□□□□□ -0.4
MSH5-204ENST00000375755 GDF15Q99988 308 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 TRIM39Q9HCM9 518 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 H3BQ06 376 aaPredicted RBP12.56□□□□□ -0.4
MSH5-204ENST00000375755 TEX28O15482 410 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 WBP4O75554 376 aaKnown RBP12.56□□□□□ -0.4
MSH5-204ENST00000375755 CREG1O75629 220 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 SCELO95171 688 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 SERPINA1P01009 418 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 SERPINF2P08697 491 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 MSH3P20585 1137 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 DDOSTP39656 456 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 RING1Q06587 406 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 TAF12Q16514 161 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 SIRPB2Q5JXA9 342 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 SHQ1Q6PI26 577 aaKnown RBP12.56□□□□□ -0.4
MSH5-204ENST00000375755 PAQR3Q6TCH7 311 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 LINGO4Q6UY18 593 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 EFL1Q7Z2Z2 1120 aaKnown RBP12.56□□□□□ -0.4
MSH5-204ENST00000375755 NRARPQ7Z6K4 114 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 PHACTR4Q8IZ21 702 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 CADM2Q8N3J6 435 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 ANKK1Q8NFD2 765 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 STAG3L4Q8TBR4 150 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 NETO1Q8TDF5 533 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 SLC25A37Q9NYZ2 338 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 TBC1D24Q9ULP9 559 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 POLR3HQ9Y535 204 aaPredicted RBP12.56□□□□□ -0.4
MSH5-204ENST00000375755 HSPE1-MOB4S4R3N1 261 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 LOC100506127A0A0U1RQW1 187 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 ZSCAN5BA6NJL1 495 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 AGRPO00253 132 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 RECQL5O94762 991 aaPredicted RBP12.56□□□□□ -0.4
MSH5-204ENST00000375755 PRSS56P0CW18 603 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 EFNA1P20827 205 aaPredicted RBP12.56□□□□□ -0.4
MSH5-204ENST00000375755 HOXD9P28356 352 aaPredicted RBP12.56□□□□□ -0.4
MSH5-204ENST00000375755 SMARCB1Q12824 385 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 GPR50Q13585 617 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 KIAA0040Q15053 153 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 GTDC1Q4AE62 458 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 FAAH2Q6GMR7 532 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 GPR149Q86SP6 731 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 TTC29Q8NA56 475 aaPredicted RBP12.56□□□□□ -0.4
MSH5-204ENST00000375755 RASSF5Q8WWW0 418 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 RNF170Q96K19 258 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 ERVK13-1Q9NX77 482 aa12.56□□□□□ -0.4
MSH5-204ENST00000375755 PRRC2BQ5JSZ5 2229 aaKnown RBP12.55□□□□□ -0.4
MSH5-204ENST00000375755 NPEPPSL1A6NEC2 478 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 CAPN5O15484 640 aaPredicted RBP12.55□□□□□ -0.4
MSH5-204ENST00000375755 HOXA9P31269 272 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 CYP4F8P98187 520 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 TBRG1Q3YBR2 411 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 SETMARQ53H47 684 aaPredicted RBP12.55□□□□□ -0.4
MSH5-204ENST00000375755 GPRIN3Q6ZVF9 776 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 ZNF438Q7Z4V0 828 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 C10orf111Q8N326 155 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 TEX26Q8N6G2 289 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 ARL14EPQ8N8R7 260 aaPredicted RBP12.55□□□□□ -0.4
MSH5-204ENST00000375755 OR52B6Q8NGF0 335 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 GTF2H4Q92759 462 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 DNASE1L2Q92874 299 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 Q96MT0 163 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 APOL4Q9BPW4 351 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 PDFQ9HBH1 243 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 TMEM45AQ9NWC5 275 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 TAS2R9Q9NYW1 312 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 TRPM5Q9NZQ8 1165 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 NDRG4Q9ULP0 352 aaKnown RBP12.55□□□□□ -0.4
MSH5-204ENST00000375755 FAM50BQ9Y247 325 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 MYOFQ9NZM1 2061 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 TRANK1O15050 2925 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 ANKRD36A6QL64 1941 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 A0A096LPI6 279 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 LDB2O43679 373 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 SNX4O95219 450 aa12.55□□□□□ -0.4
MSH5-204ENST00000375755 C21orf33P30042 268 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms