RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 SLC25A12O75746 678 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 CD72P21854 359 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 FUT4P22083 530 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 GLDCP23378 1020 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 PIK3CBP42338 1070 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 PPP2R2BQ00005 443 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 MYBPC1Q00872 1141 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 SOX4Q06945 474 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-203ENST00000375274 TAF13Q15543 124 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 ATP13A5Q4VNC0 1218 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 OR52E8Q6IFG1 317 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 KLHL35Q6PF15 583 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 ZNF517Q6ZMY9 492 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-203ENST00000375274 OR2AP1Q8NGE2 309 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 PPP1R14AQ96A00 147 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 TTYH1Q9H313 450 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-203ENST00000375274 EHD1Q9H4M9 534 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 MARCH4Q9P2E8 410 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-203ENST00000375274 EBF1Q9UH73 591 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 RIMKLBQ9ULI2 386 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 SCN11AQ9UI33 1791 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 URB1O60287 2271 aaKnown RBP11.24□□□□□ -0.61
PTCH1-203ENST00000375274 SETD1AO15047 1707 aaKnown RBP11.24□□□□□ -0.61
PTCH1-203ENST00000375274 GRID2O43424 1007 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 MAFKO60675 156 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 NOS1APO75052 506 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-203ENST00000375274 CHRM1P11229 460 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-203ENST00000375274 ITIH1P19827 911 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 RYKP34925 604 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 DGKEP52429 567 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 C6orf183Q5T699 404 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 OR10H4Q8NGA5 316 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 SPACA7Q96KW9 195 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 IL12RB2Q99665 862 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 MAPKAP1Q9BPZ7 522 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 CD244Q9BZW8 370 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 MMP27Q9H306 513 aa11.24□□□□□ -0.61
PTCH1-203ENST00000375274 ITGB1P05556 798 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 H1F0P07305 194 aaKnown RBP11.23□□□□□ -0.61
PTCH1-203ENST00000375274 HAPLN1P10915 354 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-203ENST00000375274 HSD17B1P14061 328 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 OR4D2P58180 307 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 RPS3AP61247 264 aaKnown RBP11.23□□□□□ -0.61
PTCH1-203ENST00000375274 CCL14Q16627 93 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 UBXN11Q5T124 520 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 SYVN1Q86TM6 617 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 ZNF248Q8NDW4 579 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 C1orf74Q96LT6 269 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 PRICKLE1Q96MT3 831 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-203ENST00000375274 ANKHQ9HCJ1 492 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 SOHLH2Q9NX45 425 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 IGKV6D-21A0A0A0MT36 114 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 SCN2BO60939 215 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 SRPRAP08240 638 aaKnown RBP11.23□□□□□ -0.61
PTCH1-203ENST00000375274 SLC2A2P11168 524 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-203ENST00000375274 BMP2P12643 396 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 ARPC4P59998 168 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 PIGFQ07326 219 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 LCN8Q6JVE9 175 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 KIAA1324Q6UXG2 1013 aaKnown RBP11.23□□□□□ -0.61
PTCH1-203ENST00000375274 CMTR2Q8IYT2 770 aaKnown RBP11.23□□□□□ -0.61
PTCH1-203ENST00000375274 CNIH3Q8TBE1 160 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 ZNF514Q96K75 400 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-203ENST00000375274 SORT1Q99523 831 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 TBC1D3DA0A087WVF3 549 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 TBC1D3IA0A087WXS9 549 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 TBC1D3EA0A087X179 549 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 TBC1D3KA0A087X1G2 549 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 TBC1D3FA6NER0 549 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-203ENST00000375274 TBC1D3LB9A6J9 549 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 SEMA3DO95025 777 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 YES1P07947 543 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 TBC1D3HP0C7X1 549 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 CBSLP0DN79 551 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 NT5EP21589 574 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 CBSP35520 551 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 ARSDP51689 593 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 HSF2Q03933 536 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 SEMA3AQ14563 771 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 IDNKQ5T6J7 187 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 TBC1D3GQ6DHY5 549 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 TBC1D3CQ6IPX1 549 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 DNAJB7Q7Z6W7 309 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-203ENST00000375274 NPAS3Q8IXF0 933 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 PEX5LQ8IYB4 626 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 RGL4Q8IZJ4 473 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 TBC1D3Q8IZP1 549 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-203ENST00000375274 CAMK1GQ96NX5 476 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 PSKH2Q96QS6 385 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 SLC30A2Q9BRI3 323 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 C16orf70Q9BSU1 422 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 PAK6Q9NQU5 681 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-203ENST00000375274 ZDHHC7Q9NXF8 308 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 RGPD2P0DJD1 1756 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 A0A0D9SEW6 157 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 A0A0G2JN53 185 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 IQCMA0A1B0GVH7 501 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 BOLA2-SMG1P6H3BVE0 249 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 FZD9O00144 591 aa11.23□□□□□ -0.61
PTCH1-203ENST00000375274 NME4O00746 187 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms