RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 XAF1Q6GPH4 301 aa16.52■□□□□ 0.24
RXRB-201ENST00000374680 TMEM220Q6QAJ8 160 aa16.52■□□□□ 0.24
RXRB-201ENST00000374680 OR52J3Q8NH60 311 aa16.52■□□□□ 0.24
RXRB-201ENST00000374680 ECHDC3Q96DC8 303 aa16.52■□□□□ 0.24
RXRB-201ENST00000374680 RBM4BQ9BQ04 359 aaKnown RBP16.52■□□□□ 0.24
RXRB-201ENST00000374680 TCF25Q9BQ70 676 aa16.52■□□□□ 0.24
RXRB-201ENST00000374680 RBM4Q9BWF3 364 aaKnown RBP16.52■□□□□ 0.24
RXRB-201ENST00000374680 PAK1IP1Q9NWT1 392 aaPredicted RBP16.52■□□□□ 0.24
RXRB-201ENST00000374680 PDP1Q9P0J1 537 aaPredicted RBP16.52■□□□□ 0.24
RXRB-201ENST00000374680 BAG5Q9UL15 447 aa16.52■□□□□ 0.24
RXRB-201ENST00000374680 PNMA8BQ9ULN7 279 aaPredicted RBP16.52■□□□□ 0.24
RXRB-201ENST00000374680 HS3ST2Q9Y278 367 aa16.52■□□□□ 0.24
RXRB-201ENST00000374680 KCNE1BA0A087WTH5 132 aa16.52■□□□□ 0.24
RXRB-201ENST00000374680 PLA2G16P53816 162 aa16.52■□□□□ 0.24
RXRB-201ENST00000374680 LAIR2Q6ISS4 152 aa16.52■□□□□ 0.24
RXRB-201ENST00000374680 AGTRAPQ6RW13 159 aa16.52■□□□□ 0.24
RXRB-201ENST00000374680 TMPRSS11BQ86T26 416 aa16.52■□□□□ 0.24
RXRB-201ENST00000374680 SYTL1Q8IYJ3 562 aa16.52■□□□□ 0.24
RXRB-201ENST00000374680 TMEM159Q96B96 161 aa16.52■□□□□ 0.24
RXRB-201ENST00000374680 ZNF689Q96CS4 500 aaPredicted RBP16.52■□□□□ 0.24
RXRB-201ENST00000374680 DTNBP1Q96EV8 351 aa16.52■□□□□ 0.24
RXRB-201ENST00000374680 ZFYVE19Q96K21 471 aa16.52■□□□□ 0.24
RXRB-201ENST00000374680 SLC29A3Q9BZD2 475 aa16.52■□□□□ 0.24
RXRB-201ENST00000374680 CHD9Q3L8U1 2897 aa16.52■□□□□ 0.23
RXRB-201ENST00000374680 REV3LO60673 3130 aa16.52■□□□□ 0.23
RXRB-201ENST00000374680 A0A096LPI6 279 aa16.52■□□□□ 0.23
RXRB-201ENST00000374680 TRBV5-3A0A0A0MS03 114 aa16.52■□□□□ 0.23
RXRB-201ENST00000374680 AGAP14A8MT82 685 aa16.52■□□□□ 0.23
RXRB-201ENST00000374680 CTSLP07711 333 aa16.52■□□□□ 0.23
RXRB-201ENST00000374680 IGFBP5P24593 272 aa16.52■□□□□ 0.23
RXRB-201ENST00000374680 CATSPEREQ5SY80 951 aa16.52■□□□□ 0.23
RXRB-201ENST00000374680 ADIPOR2Q86V24 386 aa16.52■□□□□ 0.23
RXRB-201ENST00000374680 SNX29P2Q8IUI4 249 aa16.52■□□□□ 0.23
RXRB-201ENST00000374680 RASGEF1AQ8N9B8 481 aa16.52■□□□□ 0.23
RXRB-201ENST00000374680 ATG16L2Q8NAA4 619 aa16.52■□□□□ 0.23
RXRB-201ENST00000374680 ASZ1Q8WWH4 475 aa16.52■□□□□ 0.23
RXRB-201ENST00000374680 TANKQ92844 425 aa16.52■□□□□ 0.23
RXRB-201ENST00000374680 IRF7Q92985 503 aa16.52■□□□□ 0.23
RXRB-201ENST00000374680 CMTM7Q96FZ5 175 aa16.52■□□□□ 0.23
RXRB-201ENST00000374680 OR4K3Q96R72 315 aa16.52■□□□□ 0.23
RXRB-201ENST00000374680 VPS29Q9UBQ0 182 aa16.52■□□□□ 0.23
RXRB-201ENST00000374680 ORC6Q9Y5N6 252 aa16.52■□□□□ 0.23
RXRB-201ENST00000374680 BCKDKO14874 412 aa16.51■□□□□ 0.23
RXRB-201ENST00000374680 SGTAO43765 313 aa16.51■□□□□ 0.23
RXRB-201ENST00000374680 C8GP07360 202 aa16.51■□□□□ 0.23
RXRB-201ENST00000374680 CCNA2P20248 432 aa16.51■□□□□ 0.23
RXRB-201ENST00000374680 MC1RQ01726 317 aa16.51■□□□□ 0.23
RXRB-201ENST00000374680 FAM217AQ8IXS0 508 aa16.51■□□□□ 0.23
RXRB-201ENST00000374680 CFAP206Q8IYR0 622 aa16.51■□□□□ 0.23
RXRB-201ENST00000374680 UBTD2Q8WUN7 234 aa16.51■□□□□ 0.23
RXRB-201ENST00000374680 CCDC115Q96NT0 180 aa16.51■□□□□ 0.23
RXRB-201ENST00000374680 RUBCNLQ9H714 662 aa16.51■□□□□ 0.23
RXRB-201ENST00000374680 ERVK-18Q9QC07 812 aa16.51■□□□□ 0.23
RXRB-201ENST00000374680 TMEFF2Q9UIK5 374 aaPredicted RBP16.51■□□□□ 0.23
RXRB-201ENST00000374680 DOLKQ9UPQ8 538 aa16.51■□□□□ 0.23
RXRB-201ENST00000374680 SAMHD1Q9Y3Z3 626 aaKnown RBP16.51■□□□□ 0.23
RXRB-201ENST00000374680 CFAP99D6REC4 459 aa16.51■□□□□ 0.23
RXRB-201ENST00000374680 K7ESM1 405 aa16.51■□□□□ 0.23
RXRB-201ENST00000374680 TGFB1P01137 390 aa16.51■□□□□ 0.23
RXRB-201ENST00000374680 ANXA4P09525 319 aaPredicted RBP16.51■□□□□ 0.23
RXRB-201ENST00000374680 POLR2EP19388 210 aaKnown RBP16.51■□□□□ 0.23
RXRB-201ENST00000374680 OR1E2P47887 323 aa16.51■□□□□ 0.23
RXRB-201ENST00000374680 SLC6A12P48065 614 aa16.51■□□□□ 0.23
RXRB-201ENST00000374680 MLLT10P55197 1068 aa16.51■□□□□ 0.23
RXRB-201ENST00000374680 FPGSQ05932 587 aa16.51■□□□□ 0.23
RXRB-201ENST00000374680 ATP1A4Q13733 1029 aa16.51■□□□□ 0.23
RXRB-201ENST00000374680 DPY19L1Q2PZI1 675 aa16.51■□□□□ 0.23
RXRB-201ENST00000374680 ATG9BQ674R7 924 aa16.51■□□□□ 0.23
RXRB-201ENST00000374680 LRRC70Q7Z2Q7 622 aa16.51■□□□□ 0.23
RXRB-201ENST00000374680 CPXM2Q8N436 756 aa16.51■□□□□ 0.23
RXRB-201ENST00000374680 OR5K1Q8NHB7 308 aa16.51■□□□□ 0.23
RXRB-201ENST00000374680 HHIPL1Q96JK4 782 aa16.51■□□□□ 0.23
RXRB-201ENST00000374680 TDP1Q9NUW8 608 aa16.51■□□□□ 0.23
RXRB-201ENST00000374680 C3orf18Q9UK00 162 aa16.51■□□□□ 0.23
RXRB-201ENST00000374680 SNX5Q9Y5X3 404 aa16.51■□□□□ 0.23
RXRB-201ENST00000374680 ATG2BQ96BY7 2078 aa16.5■□□□□ 0.23
RXRB-201ENST00000374680 TRIM64CA6NLI5 447 aa16.5■□□□□ 0.23
RXRB-201ENST00000374680 NUAK1O60285 661 aa16.5■□□□□ 0.23
RXRB-201ENST00000374680 EPN2O95208 641 aa16.5■□□□□ 0.23
RXRB-201ENST00000374680 C7P10643 843 aa16.5■□□□□ 0.23
RXRB-201ENST00000374680 PRPS2P11908 318 aa16.5■□□□□ 0.23
RXRB-201ENST00000374680 TIMP2P16035 220 aa16.5■□□□□ 0.23
RXRB-201ENST00000374680 CSNK1DP48730 415 aa16.5■□□□□ 0.23
RXRB-201ENST00000374680 GZMMP51124 257 aa16.5■□□□□ 0.23
RXRB-201ENST00000374680 NFATC3Q12968 1075 aa16.5■□□□□ 0.23
RXRB-201ENST00000374680 GALNT18Q6P9A2 607 aa16.5■□□□□ 0.23
RXRB-201ENST00000374680 HORMAD1Q86X24 394 aa16.5■□□□□ 0.23
RXRB-201ENST00000374680 ZCCHC7Q8N3Z6 543 aaKnown RBP16.5■□□□□ 0.23
RXRB-201ENST00000374680 OR5AK3PQ8NH89 298 aa16.5■□□□□ 0.23
RXRB-201ENST00000374680 NELL1Q92832 810 aa16.5■□□□□ 0.23
RXRB-201ENST00000374680 AP2M1Q96CW1 435 aa16.5■□□□□ 0.23
RXRB-201ENST00000374680 MCCC1Q96RQ3 725 aaPredicted RBP16.5■□□□□ 0.23
RXRB-201ENST00000374680 LYSMD1Q96S90 227 aa16.5■□□□□ 0.23
RXRB-201ENST00000374680 HEPHQ9BQS7 1158 aa16.5■□□□□ 0.23
RXRB-201ENST00000374680 ACSL6Q9UKU0 697 aa16.5■□□□□ 0.23
RXRB-201ENST00000374680 VCANP13611 3396 aa16.5■□□□□ 0.23
RXRB-201ENST00000374680 MICAL3Q7RTP6 2002 aa16.5■□□□□ 0.23
RXRB-201ENST00000374680 GABRR3A8MPY1 467 aa16.5■□□□□ 0.23
RXRB-201ENST00000374680 ABCB7O75027 752 aa16.5■□□□□ 0.23
RXRB-201ENST00000374680 RECQL5O94762 991 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms