RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 C3orf38Q5JPI3 329 aa10.92□□□□□ -0.66
HSPG2-202ENST00000374676 C16orf46Q6P387 395 aa10.92□□□□□ -0.66
HSPG2-202ENST00000374676 LRRC70Q7Z2Q7 622 aa10.92□□□□□ -0.66
HSPG2-202ENST00000374676 PAQR7Q86WK9 346 aa10.92□□□□□ -0.66
HSPG2-202ENST00000374676 SRRM1Q8IYB3 904 aaKnown RBP10.92□□□□□ -0.66
HSPG2-202ENST00000374676 ABHD11Q8NFV4 315 aa10.92□□□□□ -0.66
HSPG2-202ENST00000374676 OR4K1Q8NGD4 311 aa10.92□□□□□ -0.66
HSPG2-202ENST00000374676 OR8K5Q8NH50 307 aa10.92□□□□□ -0.66
HSPG2-202ENST00000374676 EXT2Q93063 718 aa10.92□□□□□ -0.66
HSPG2-202ENST00000374676 SLC46A1Q96NT5 459 aa10.92□□□□□ -0.66
HSPG2-202ENST00000374676 FCRL4Q96PJ5 515 aa10.92□□□□□ -0.66
HSPG2-202ENST00000374676 TAAR9Q96RI9 348 aa10.92□□□□□ -0.66
HSPG2-202ENST00000374676 PLCD4Q9BRC7 762 aa10.92□□□□□ -0.66
HSPG2-202ENST00000374676 ZPBPQ9BS86 351 aa10.92□□□□□ -0.66
HSPG2-202ENST00000374676 KLHL25Q9H0H3 589 aa10.92□□□□□ -0.66
HSPG2-202ENST00000374676 VIPAS39Q9H9C1 493 aa10.92□□□□□ -0.66
HSPG2-202ENST00000374676 FAM60AQ9NP50 221 aa10.92□□□□□ -0.66
HSPG2-202ENST00000374676 SSU72Q9NP77 194 aaKnown RBP10.92□□□□□ -0.66
HSPG2-202ENST00000374676 SLC6A20Q9NP91 592 aa10.92□□□□□ -0.66
HSPG2-202ENST00000374676 ABCF3Q9NUQ8 709 aa10.92□□□□□ -0.66
HSPG2-202ENST00000374676 DNAJC11Q9NVH1 559 aa10.92□□□□□ -0.66
HSPG2-202ENST00000374676 SOHLH2Q9NX45 425 aa10.92□□□□□ -0.66
HSPG2-202ENST00000374676 SLC39A1Q9NY26 324 aa10.92□□□□□ -0.66
HSPG2-202ENST00000374676 GPRC5BQ9NZH0 403 aa10.92□□□□□ -0.66
HSPG2-202ENST00000374676 CPSF2Q9P2I0 782 aaKnown RBP10.92□□□□□ -0.66
HSPG2-202ENST00000374676 PISDQ9UG56 409 aa10.92□□□□□ -0.66
HSPG2-202ENST00000374676 EMCNQ9ULC0 261 aa10.92□□□□□ -0.66
HSPG2-202ENST00000374676 KLHL20Q9Y2M5 609 aa10.92□□□□□ -0.66
HSPG2-202ENST00000374676 PCDHGA3Q9Y5H0 932 aa10.92□□□□□ -0.66
HSPG2-202ENST00000374676 TNPO3Q9Y5L0 923 aaKnown RBP10.92□□□□□ -0.66
HSPG2-202ENST00000374676 ACTL7BQ9Y614 415 aa10.92□□□□□ -0.66
HSPG2-202ENST00000374676 H7BY64 318 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 K7EPI3 171 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 TK2O00142 265 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 POLR1CO15160 346 aaPredicted RBP10.91□□□□□ -0.66
HSPG2-202ENST00000374676 NVLO15381 856 aaKnown RBP10.91□□□□□ -0.66
HSPG2-202ENST00000374676 PLIN3O60664 434 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 WDR47O94967 919 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 MYZAPP0CAP1 466 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 FGF5P12034 268 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 GNAZP19086 355 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 ITIH1P19827 911 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 RBMS1P29558 406 aaKnown RBP10.91□□□□□ -0.66
HSPG2-202ENST00000374676 ETV5P41161 510 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 HSPA7P48741 367 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 MAPK10P53779 464 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 PCDH1Q08174 1060 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 CDC16Q13042 620 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 ZC3H12BQ5HYM0 836 aaKnown RBP10.91□□□□□ -0.66
HSPG2-202ENST00000374676 FBXO42Q6P3S6 717 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 CEACAM20Q6UY09 585 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 EXOC3L1Q86VI1 746 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 FAM129CQ86XR2 697 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 PTGR2Q8N8N7 351 aaPredicted RBP10.91□□□□□ -0.66
HSPG2-202ENST00000374676 SLC5A11Q8WWX8 675 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 ESAMQ96AP7 390 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 ZNF501Q96CX3 271 aaPredicted RBP10.91□□□□□ -0.66
HSPG2-202ENST00000374676 NXPE2Q96DL1 559 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 APOPT1Q96IL0 206 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 PRAP1Q96NZ9 151 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 TEFMQ96QE5 360 aaKnown RBP10.91□□□□□ -0.66
HSPG2-202ENST00000374676 OR6C1Q96RD1 312 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 SMC6Q96SB8 1091 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 RUFY1Q96T51 708 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 SARGQ9BW04 601 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 DDA1Q9BW61 102 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 C1QTNF3Q9BXJ4 246 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 ASPSCR1Q9BZE9 553 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 STMN4Q9H169 189 aaPredicted RBP10.91□□□□□ -0.66
HSPG2-202ENST00000374676 PELI2Q9HAT8 420 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 TMBIM4Q9HC24 238 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 ENAMQ9NRM1 1142 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 FGF21Q9NSA1 209 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 CUEDC1Q9NWM3 386 aaPredicted RBP10.91□□□□□ -0.66
HSPG2-202ENST00000374676 PILRAQ9UKJ1 303 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 RARRES3Q9UL19 164 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 PLCL2Q9UPR0 1127 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 SH2B3Q9UQQ2 575 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 PLLPQ9Y342 182 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 DYRK1BQ9Y463 629 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 PCDHGA7Q9Y5G6 932 aa10.91□□□□□ -0.66
HSPG2-202ENST00000374676 URB1O60287 2271 aaKnown RBP10.91□□□□□ -0.66
HSPG2-202ENST00000374676 UQCRHLA0A096LP55 91 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 PMS2P1A4D2B8 440 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 A8MT66 165 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 CDRT15L2A8MXV6 281 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 AGPSO00116 658 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 AGRPO00253 132 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 TYROBPO43914 113 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 DLX3O60479 287 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 CCNT2O60583 730 aaKnown RBP10.9□□□□□ -0.66
HSPG2-202ENST00000374676 SRPX2O60687 465 aaPredicted RBP10.9□□□□□ -0.66
HSPG2-202ENST00000374676 CTSVO60911 334 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 TNFSF15O95150 251 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 PROCP04070 461 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 UQCRHP07919 91 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 CDH1P12830 882 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 CREB1P16220 341 aa10.9□□□□□ -0.66
HSPG2-202ENST00000374676 ATP5F1P24539 256 aaPredicted RBP10.9□□□□□ -0.66
HSPG2-202ENST00000374676 CASP2P42575 452 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms