RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 CISD3P0C7P0 127 aa11.72□□□□□ -0.53
HMGCL-202ENST00000374487 PCNAP12004 261 aa11.72□□□□□ -0.53
HMGCL-202ENST00000374487 ETS2P15036 469 aa11.72□□□□□ -0.53
HMGCL-202ENST00000374487 RPS9P46781 194 aaKnown RBP11.72□□□□□ -0.53
HMGCL-202ENST00000374487 CTSCP53634 463 aa11.72□□□□□ -0.53
HMGCL-202ENST00000374487 APOFQ13790 326 aa11.72□□□□□ -0.53
HMGCL-202ENST00000374487 MLF2Q15773 248 aaPredicted RBP11.72□□□□□ -0.53
HMGCL-202ENST00000374487 RUNDC3AQ59EK9 446 aa11.72□□□□□ -0.53
HMGCL-202ENST00000374487 LIPJQ5W064 366 aa11.72□□□□□ -0.53
HMGCL-202ENST00000374487 TTC33Q6PID6 262 aaPredicted RBP11.72□□□□□ -0.53
HMGCL-202ENST00000374487 THOC6Q86W42 341 aaKnown RBP11.72□□□□□ -0.53
HMGCL-202ENST00000374487 ANKRD46Q86W74 232 aa11.72□□□□□ -0.53
HMGCL-202ENST00000374487 TMEM132CQ8N3T6 1108 aa11.72□□□□□ -0.53
HMGCL-202ENST00000374487 METTL25Q8N6Q8 603 aa11.72□□□□□ -0.53
HMGCL-202ENST00000374487 WFIKKN2Q8TEU8 576 aa11.72□□□□□ -0.53
HMGCL-202ENST00000374487 NCLNQ969V3 563 aa11.72□□□□□ -0.53
HMGCL-202ENST00000374487 FAM162AQ96A26 154 aa11.72□□□□□ -0.53
HMGCL-202ENST00000374487 APIPQ96GX9 242 aa11.72□□□□□ -0.53
HMGCL-202ENST00000374487 CCDC138Q96M89 665 aa11.72□□□□□ -0.53
HMGCL-202ENST00000374487 IKZF5Q9H5V7 419 aa11.72□□□□□ -0.53
HMGCL-202ENST00000374487 SMPD3Q9NY59 655 aaPredicted RBP11.72□□□□□ -0.53
HMGCL-202ENST00000374487 NDRG2Q9UN36 371 aaKnown RBP11.72□□□□□ -0.53
HMGCL-202ENST00000374487 NEUROG3Q9Y4Z2 214 aa11.72□□□□□ -0.53
HMGCL-202ENST00000374487 PCDHB14Q9Y5E9 798 aa11.72□□□□□ -0.53
HMGCL-202ENST00000374487 PIAS3Q9Y6X2 628 aa11.72□□□□□ -0.53
HMGCL-202ENST00000374487 COMMD3-BMI1R4GMX3 469 aa11.72□□□□□ -0.53
HMGCL-202ENST00000374487 NUP210Q8TEM1 1887 aaPredicted RBP11.72□□□□□ -0.53
HMGCL-202ENST00000374487 USP34Q70CQ2 3546 aa11.71□□□□□ -0.53
HMGCL-202ENST00000374487 DLGAP1O14490 977 aa11.71□□□□□ -0.53
HMGCL-202ENST00000374487 PSIP1O75475 530 aaKnown RBP11.71□□□□□ -0.53
HMGCL-202ENST00000374487 SDC1P18827 310 aa11.71□□□□□ -0.53
HMGCL-202ENST00000374487 PRPH2P23942 346 aa11.71□□□□□ -0.53
HMGCL-202ENST00000374487 TACR1P25103 407 aa11.71□□□□□ -0.53
HMGCL-202ENST00000374487 PBLDP30039 288 aaPredicted RBP11.71□□□□□ -0.53
HMGCL-202ENST00000374487 MESP2Q0VG99 397 aa11.71□□□□□ -0.53
HMGCL-202ENST00000374487 NAE1Q13564 534 aa11.71□□□□□ -0.53
HMGCL-202ENST00000374487 SLC36A3Q495N2 470 aa11.71□□□□□ -0.53
HMGCL-202ENST00000374487 OTUD3Q5T2D3 398 aaPredicted RBP11.71□□□□□ -0.53
HMGCL-202ENST00000374487 NOXRED1Q6NXP6 359 aa11.71□□□□□ -0.53
HMGCL-202ENST00000374487 TMEM220Q6QAJ8 160 aa11.71□□□□□ -0.53
HMGCL-202ENST00000374487 AGTRAPQ6RW13 159 aa11.71□□□□□ -0.53
HMGCL-202ENST00000374487 PARS2Q7L3T8 475 aaKnown RBP11.71□□□□□ -0.53
HMGCL-202ENST00000374487 GPR180Q86V85 440 aa11.71□□□□□ -0.53
HMGCL-202ENST00000374487 MSRB3Q8IXL7 192 aa11.71□□□□□ -0.53
HMGCL-202ENST00000374487 RIMKLAQ8IXN7 391 aa11.71□□□□□ -0.53
HMGCL-202ENST00000374487 PHACTR4Q8IZ21 702 aa11.71□□□□□ -0.53
HMGCL-202ENST00000374487 NRSN1Q8IZ57 195 aa11.71□□□□□ -0.53
HMGCL-202ENST00000374487 ZNF786Q8N393 782 aa11.71□□□□□ -0.53
HMGCL-202ENST00000374487 DHRSXQ8N5I4 330 aa11.71□□□□□ -0.53
HMGCL-202ENST00000374487 ZNF548Q8NEK5 533 aaPredicted RBP11.71□□□□□ -0.53
HMGCL-202ENST00000374487 FBXO30Q8TB52 745 aa11.71□□□□□ -0.53
HMGCL-202ENST00000374487 CSGALNACT1Q8TDX6 532 aa11.71□□□□□ -0.53
HMGCL-202ENST00000374487 GFM2Q969S9 779 aaKnown RBP11.71□□□□□ -0.53
HMGCL-202ENST00000374487 NMD3Q96D46 503 aaKnown RBP11.71□□□□□ -0.53
HMGCL-202ENST00000374487 FAM120BQ96EK7 910 aaKnown RBP11.71□□□□□ -0.53
HMGCL-202ENST00000374487 KCNH6Q9H252 994 aa11.71□□□□□ -0.53
HMGCL-202ENST00000374487 CIDEBQ9UHD4 219 aa11.71□□□□□ -0.53
HMGCL-202ENST00000374487 PLXNB3Q9ULL4 1909 aa11.71□□□□□ -0.53
HMGCL-202ENST00000374487 COL4A2P08572 1712 aa11.71□□□□□ -0.54
HMGCL-202ENST00000374487 A0A096LPI6 279 aa11.71□□□□□ -0.54
HMGCL-202ENST00000374487 A0A1B0GTW7 788 aa11.71□□□□□ -0.54
HMGCL-202ENST00000374487 CXCR6O00574 342 aa11.71□□□□□ -0.54
HMGCL-202ENST00000374487 AREL1O15033 823 aa11.71□□□□□ -0.54
HMGCL-202ENST00000374487 UGDHO60701 494 aa11.71□□□□□ -0.54
HMGCL-202ENST00000374487 PRAMEF4O60810 478 aa11.71□□□□□ -0.54
HMGCL-202ENST00000374487 SEC24DO94855 1032 aaPredicted RBP11.71□□□□□ -0.54
HMGCL-202ENST00000374487 PRNPP04156 253 aa11.71□□□□□ -0.54
HMGCL-202ENST00000374487 GSNP06396 782 aa11.71□□□□□ -0.54
HMGCL-202ENST00000374487 AMD1P17707 334 aa11.71□□□□□ -0.54
HMGCL-202ENST00000374487 MYF6P23409 242 aa11.71□□□□□ -0.54
HMGCL-202ENST00000374487 PRLHRP49683 370 aa11.71□□□□□ -0.54
HMGCL-202ENST00000374487 VASPP50552 380 aaPredicted RBP11.71□□□□□ -0.54
HMGCL-202ENST00000374487 DDX39BQ13838 428 aaKnown RBP11.71□□□□□ -0.54
HMGCL-202ENST00000374487 UBXN2BQ14CS0 331 aa11.71□□□□□ -0.54
HMGCL-202ENST00000374487 GTDC1Q4AE62 458 aa11.71□□□□□ -0.54
HMGCL-202ENST00000374487 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.71□□□□□ -0.54
HMGCL-202ENST00000374487 FNDC3BQ53EP0 1204 aaKnown RBP11.71□□□□□ -0.54
HMGCL-202ENST00000374487 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.71□□□□□ -0.54
HMGCL-202ENST00000374487 PRAMEF9Q5VWM5 478 aa11.71□□□□□ -0.54
HMGCL-202ENST00000374487 ATG9BQ674R7 924 aa11.71□□□□□ -0.54
HMGCL-202ENST00000374487 C12orf40Q86WS4 652 aa11.71□□□□□ -0.54
HMGCL-202ENST00000374487 SYT12Q8IV01 421 aa11.71□□□□□ -0.54
HMGCL-202ENST00000374487 SFTPA1Q8IWL2 248 aa11.71□□□□□ -0.54
HMGCL-202ENST00000374487 SLC22A15Q8IZD6 547 aa11.71□□□□□ -0.54
HMGCL-202ENST00000374487 FBXL6Q8N531 539 aa11.71□□□□□ -0.54
HMGCL-202ENST00000374487 HM13Q8TCT9 377 aa11.71□□□□□ -0.54
HMGCL-202ENST00000374487 GLMNQ92990 594 aa11.71□□□□□ -0.54
HMGCL-202ENST00000374487 TESCQ96BS2 214 aa11.71□□□□□ -0.54
HMGCL-202ENST00000374487 EGLN2Q96KS0 407 aa11.71□□□□□ -0.54
HMGCL-202ENST00000374487 MTERF1Q99551 399 aaKnown RBP11.71□□□□□ -0.54
HMGCL-202ENST00000374487 EBPLQ9BY08 206 aa11.71□□□□□ -0.54
HMGCL-202ENST00000374487 PAIP1Q9H074 479 aaKnown RBP11.71□□□□□ -0.54
HMGCL-202ENST00000374487 KAT8Q9H7Z6 458 aaKnown RBP11.71□□□□□ -0.54
HMGCL-202ENST00000374487 VCX3AQ9NNX9 186 aa11.71□□□□□ -0.54
HMGCL-202ENST00000374487 VPS29Q9UBQ0 182 aa11.71□□□□□ -0.54
HMGCL-202ENST00000374487 FADS3Q9Y5Q0 445 aa11.71□□□□□ -0.54
HMGCL-202ENST00000374487 DMDP11532 3685 aa11.7□□□□□ -0.54
HMGCL-202ENST00000374487 ZFC3H1O60293 1989 aaKnown RBP11.7□□□□□ -0.54
HMGCL-202ENST00000374487 RFXANKO14593 260 aa11.7□□□□□ -0.54
HMGCL-202ENST00000374487 HOXC11O43248 304 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms