RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 RAB36O95755 333 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 CHRM5P08912 532 aaPredicted RBP11.26□□□□□ -0.61
VCL-202ENST00000372755 RPL17P18621 184 aaKnown RBP11.26□□□□□ -0.61
VCL-202ENST00000372755 S100A2P29034 98 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 GHRHRQ02643 423 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 DUOXA1Q1HG43 343 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 SLC25A25Q6KCM7 469 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 PAQR7Q86WK9 346 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 TRMT61BQ9BVS5 477 aaKnown RBP11.26□□□□□ -0.61
VCL-202ENST00000372755 BRD7Q9NPI1 651 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 CLIC1O00299 241 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 CLEC3AO75596 197 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 ITGB1P05556 798 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 NPTX1Q15818 432 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 ZNF227Q86WZ6 799 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 OR4K17Q8NGC6 315 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 NDC1Q9BTX1 674 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 ZNF471Q9BX82 626 aaPredicted RBP11.26□□□□□ -0.61
VCL-202ENST00000372755 Q9N2J8 555 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 ZNF69Q9UC07 566 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 MKLN1Q9UL63 735 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 B4DGG1 531 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 LSM1O15116 133 aaKnown RBP11.25□□□□□ -0.61
VCL-202ENST00000372755 NDUFS4O43181 175 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 ERI3O43414 337 aaKnown RBP11.25□□□□□ -0.61
VCL-202ENST00000372755 TBX1O43435 398 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 SRCP12931 536 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 VIPR1P32241 457 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 FUT2Q10981 343 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 ARSIQ5FYB1 569 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 CLEC12AQ5QGZ9 265 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 ZNF565Q8N9K5 539 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 ASB9Q96DX5 294 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 DMRTB1Q96MA1 342 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 ASPNQ9BXN1 380 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 C14orf166Q9Y224 244 aaKnown RBP11.25□□□□□ -0.61
VCL-202ENST00000372755 FOSL2P15408 326 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 SCNN1AP37088 669 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 MAD2L1BPQ15013 274 aaPredicted RBP11.25□□□□□ -0.61
VCL-202ENST00000372755 THAP6Q8TBB0 222 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 KLHL6Q8WZ60 621 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 SIPA1Q96FS4 1042 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 A0A1B0GVC2 190 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 PCP4L1A6NKN8 68 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 EI24O14681 340 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 SHOX2O60902 331 aaPredicted RBP11.25□□□□□ -0.61
VCL-202ENST00000372755 ECI2O75521 394 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 CHRNB2P17787 502 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 GDF10P55107 478 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 RBM20Q5T481 1227 aaKnown RBP11.25□□□□□ -0.61
VCL-202ENST00000372755 PPP2R2DQ66LE6 453 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 OR56A1Q8NGH5 318 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 KCNC2Q96PR1 638 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 ITPAQ9BY32 194 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 UCK2Q9BZX2 261 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 DPAGT1Q9H3H5 408 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 APOBEC3GQ9HC16 384 aaKnown RBP11.25□□□□□ -0.61
VCL-202ENST00000372755 SMURF1Q9HCE7 757 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 DNAJB4Q9UDY4 337 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 RNF225M0QZC1 329 aaPredicted RBP11.25□□□□□ -0.61
VCL-202ENST00000372755 ADAMTS3O15072 1205 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 MUSKO15146 869 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 PCDHGA12O60330 932 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 ZNF8P17098 575 aaPredicted RBP11.25□□□□□ -0.61
VCL-202ENST00000372755 AP2S1P53680 142 aaPredicted RBP11.25□□□□□ -0.61
VCL-202ENST00000372755 ARPC4P59998 168 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 DECR1Q16698 335 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 SPRYD7Q5W111 196 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 FRG2Q64ET8 278 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 OR52E4Q8NGH9 312 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 SMPDL3AQ92484 453 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 FRG2BQ96QU4 278 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 YIPF4Q9BSR8 244 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 E7EQ34 232 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 TSPAN4O14817 238 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 CAPN15O75808 1086 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 TGFB1P01137 390 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 CSN2P05814 226 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 IRF9Q00978 393 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 MBLAC2Q68D91 279 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 TMCO2Q7Z6W1 182 aaPredicted RBP11.25□□□□□ -0.61
VCL-202ENST00000372755 C12orf40Q86WS4 652 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 OR13C4Q8NGS5 318 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 THRSPQ92748 146 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 LRRC58Q96CX6 371 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 OSBPL2Q9H1P3 480 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 ENY2Q9NPA8 101 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 PCDHB11Q9Y5F2 797 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 PCDHGB6Q9Y5F9 930 aa11.25□□□□□ -0.61
VCL-202ENST00000372755 TRBC2A0A5B9 178 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 WTIPA6NIX2 430 aaPredicted RBP11.24□□□□□ -0.61
VCL-202ENST00000372755 USP2O75604 605 aaPredicted RBP11.24□□□□□ -0.61
VCL-202ENST00000372755 ADH5P11766 374 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 ARL3P36405 182 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 PDCD4Q53EL6 469 aaKnown RBP11.24□□□□□ -0.61
VCL-202ENST00000372755 PAQR3Q6TCH7 311 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 OR2L2Q8NH16 312 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 ARMC5Q96C12 935 aa11.24□□□□□ -0.61
VCL-202ENST00000372755 HPF1Q9NWY4 346 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms