RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 KRT87PA6NCN2 255 aa15.9■□□□□ 0.14
SDC4-201ENST00000372733 PABPN1LA6NDY0 278 aaKnown RBP15.9■□□□□ 0.14
SDC4-201ENST00000372733 A8MX80 341 aa15.9■□□□□ 0.14
SDC4-201ENST00000372733 PSMD11O00231 422 aa15.9■□□□□ 0.14
SDC4-201ENST00000372733 SYN3O14994 580 aa15.9■□□□□ 0.14
SDC4-201ENST00000372733 FZD6O60353 706 aa15.9■□□□□ 0.14
SDC4-201ENST00000372733 KCNK5O95279 499 aa15.9■□□□□ 0.14
SDC4-201ENST00000372733 COL6A1P12109 1028 aa15.9■□□□□ 0.14
SDC4-201ENST00000372733 NR4A2P43354 598 aa15.9■□□□□ 0.14
SDC4-201ENST00000372733 KIR3DL1P43629 444 aa15.9■□□□□ 0.14
SDC4-201ENST00000372733 ITGA1P56199 1179 aa15.9■□□□□ 0.14
SDC4-201ENST00000372733 ZXDBP98169 803 aa15.9■□□□□ 0.14
SDC4-201ENST00000372733 LRIT3Q3SXY7 679 aa15.9■□□□□ 0.14
SDC4-201ENST00000372733 FAHD1Q6P587 224 aa15.9■□□□□ 0.14
SDC4-201ENST00000372733 CYP2U1Q7Z449 544 aa15.9■□□□□ 0.14
SDC4-201ENST00000372733 SERPINA11Q86U17 422 aa15.9■□□□□ 0.14
SDC4-201ENST00000372733 FAM193BQ96PV7 902 aaPredicted RBP15.9■□□□□ 0.14
SDC4-201ENST00000372733 PANX1Q96RD7 426 aa15.9■□□□□ 0.14
SDC4-201ENST00000372733 MMP27Q9H306 513 aa15.9■□□□□ 0.14
SDC4-201ENST00000372733 ANKHQ9HCJ1 492 aa15.9■□□□□ 0.14
SDC4-201ENST00000372733 IL26Q9NPH9 171 aa15.9■□□□□ 0.14
SDC4-201ENST00000372733 ITM2CQ9NQX7 267 aa15.9■□□□□ 0.14
SDC4-201ENST00000372733 PCDHGA6Q9Y5G7 932 aa15.9■□□□□ 0.14
SDC4-201ENST00000372733 ISPDA4D126 451 aa15.9■□□□□ 0.14
SDC4-201ENST00000372733 FPGTO14772 594 aa15.9■□□□□ 0.14
SDC4-201ENST00000372733 RFPL2O75678 378 aa15.9■□□□□ 0.14
SDC4-201ENST00000372733 PRPS2P11908 318 aa15.9■□□□□ 0.14
SDC4-201ENST00000372733 ITGALP20701 1170 aa15.9■□□□□ 0.14
SDC4-201ENST00000372733 CTSKP43235 329 aa15.9■□□□□ 0.14
SDC4-201ENST00000372733 TIGD6Q17RP2 521 aa15.9■□□□□ 0.14
SDC4-201ENST00000372733 P3H2Q8IVL5 708 aa15.9■□□□□ 0.14
SDC4-201ENST00000372733 POP5Q969H6 163 aaKnown RBP15.9■□□□□ 0.14
SDC4-201ENST00000372733 SPATA17Q96L03 361 aa15.9■□□□□ 0.14
SDC4-201ENST00000372733 ARL15Q9NXU5 204 aa15.9■□□□□ 0.14
SDC4-201ENST00000372733 HCSTQ9UBK5 93 aa15.9■□□□□ 0.14
SDC4-201ENST00000372733 CRLS1Q9UJA2 301 aa15.9■□□□□ 0.14
SDC4-201ENST00000372733 RPS6KA6Q9UK32 745 aa15.9■□□□□ 0.14
SDC4-201ENST00000372733 LOC100506127A0A0U1RQW1 187 aa15.89■□□□□ 0.13
SDC4-201ENST00000372733 OR6C75A6NL08 312 aa15.89■□□□□ 0.13
SDC4-201ENST00000372733 K7ERQ8 282 aa15.89■□□□□ 0.13
SDC4-201ENST00000372733 ACRV1P26436 265 aa15.89■□□□□ 0.13
SDC4-201ENST00000372733 SLC19A1P41440 591 aa15.89■□□□□ 0.13
SDC4-201ENST00000372733 NUDT6P53370 316 aa15.89■□□□□ 0.13
SDC4-201ENST00000372733 ZNF181Q2M3W8 571 aa15.89■□□□□ 0.13
SDC4-201ENST00000372733 ZXDCQ2QGD7 858 aaPredicted RBP15.89■□□□□ 0.13
SDC4-201ENST00000372733 ZNF621Q6ZSS3 439 aa15.89■□□□□ 0.13
SDC4-201ENST00000372733 SYTL1Q8IYJ3 562 aa15.89■□□□□ 0.13
SDC4-201ENST00000372733 CLECL1Q8IZS7 167 aa15.89■□□□□ 0.13
SDC4-201ENST00000372733 CLIP4Q8N3C7 705 aa15.89■□□□□ 0.13
SDC4-201ENST00000372733 PAF1Q8N7H5 531 aa15.89■□□□□ 0.13
SDC4-201ENST00000372733 CDC26Q8NHZ8 85 aa15.89■□□□□ 0.13
SDC4-201ENST00000372733 EHD1Q9H4M9 534 aa15.89■□□□□ 0.13
SDC4-201ENST00000372733 PIKFYVEQ9Y2I7 2098 aa15.89■□□□□ 0.13
SDC4-201ENST00000372733 DSCR3O14972 297 aa15.89■□□□□ 0.13
SDC4-201ENST00000372733 COCHO43405 550 aa15.89■□□□□ 0.13
SDC4-201ENST00000372733 NUAK1O60285 661 aa15.89■□□□□ 0.13
SDC4-201ENST00000372733 MRPS14O60783 128 aaKnown RBP15.89■□□□□ 0.13
SDC4-201ENST00000372733 ZNF24P17028 368 aa15.89■□□□□ 0.13
SDC4-201ENST00000372733 TCEA1P23193 301 aaKnown RBP15.89■□□□□ 0.13
SDC4-201ENST00000372733 SEMG2Q02383 582 aa15.89■□□□□ 0.13
SDC4-201ENST00000372733 MRPL58Q14197 206 aaKnown RBP15.89■□□□□ 0.13
SDC4-201ENST00000372733 CHRNA6Q15825 494 aa15.89■□□□□ 0.13
SDC4-201ENST00000372733 TPRG1LQ5T0D9 272 aa15.89■□□□□ 0.13
SDC4-201ENST00000372733 C6orf183Q5T699 404 aa15.89■□□□□ 0.13
SDC4-201ENST00000372733 ARMC12Q5T9G4 340 aa15.89■□□□□ 0.13
SDC4-201ENST00000372733 DESI1Q6ICB0 168 aa15.89■□□□□ 0.13
SDC4-201ENST00000372733 ELMOD1Q8N336 334 aa15.89■□□□□ 0.13
SDC4-201ENST00000372733 PIH1D2Q8WWB5 315 aa15.89■□□□□ 0.13
SDC4-201ENST00000372733 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.89■□□□□ 0.13
SDC4-201ENST00000372733 KCNE1BA0A087WTH5 132 aa15.88■□□□□ 0.13
SDC4-201ENST00000372733 STC2O76061 302 aa15.88■□□□□ 0.13
SDC4-201ENST00000372733 EPN2O95208 641 aa15.88■□□□□ 0.13
SDC4-201ENST00000372733 CLDN7O95471 211 aa15.88■□□□□ 0.13
SDC4-201ENST00000372733 CPSF4O95639 269 aaKnown RBP15.88■□□□□ 0.13
SDC4-201ENST00000372733 IGHA2P01877 340 aa15.88■□□□□ 0.13
SDC4-201ENST00000372733 C9P02748 559 aa15.88■□□□□ 0.13
SDC4-201ENST00000372733 ASGR1P07306 291 aa15.88■□□□□ 0.13
SDC4-201ENST00000372733 AQP1P29972 269 aa15.88■□□□□ 0.13
SDC4-201ENST00000372733 GKP32189 559 aa15.88■□□□□ 0.13
SDC4-201ENST00000372733 MTA1Q13330 715 aa15.88■□□□□ 0.13
SDC4-201ENST00000372733 DUOXA1Q1HG43 343 aa15.88■□□□□ 0.13
SDC4-201ENST00000372733 CBLL1Q75N03 491 aa15.88■□□□□ 0.13
SDC4-201ENST00000372733 EIF3MQ7L2H7 374 aaKnown RBP15.88■□□□□ 0.13
SDC4-201ENST00000372733 ZFYVE1Q9HBF4 777 aa15.88■□□□□ 0.13
SDC4-201ENST00000372733 KLHL3Q9UH77 587 aa15.88■□□□□ 0.13
SDC4-201ENST00000372733 SAGE2PA6NJ88 616 aa15.88■□□□□ 0.13
SDC4-201ENST00000372733 TAF4O00268 1085 aa15.88■□□□□ 0.13
SDC4-201ENST00000372733 ANXA5P08758 320 aa15.88■□□□□ 0.13
SDC4-201ENST00000372733 NUDT7P0C024 238 aa15.88■□□□□ 0.13
SDC4-201ENST00000372733 ALOX12P18054 663 aa15.88■□□□□ 0.13
SDC4-201ENST00000372733 UGT2B10P36537 528 aa15.88■□□□□ 0.13
SDC4-201ENST00000372733 TUBA1BP68363 451 aa15.88■□□□□ 0.13
SDC4-201ENST00000372733 GPR17Q13304 367 aa15.88■□□□□ 0.13
SDC4-201ENST00000372733 TAF1CQ15572 869 aaPredicted RBP15.88■□□□□ 0.13
SDC4-201ENST00000372733 UGT8Q16880 541 aa15.88■□□□□ 0.13
SDC4-201ENST00000372733 TUBA1AQ71U36 451 aa15.88■□□□□ 0.13
SDC4-201ENST00000372733 UTS2BQ765I0 119 aa15.88■□□□□ 0.13
SDC4-201ENST00000372733 CHST9Q7L1S5 443 aa15.88■□□□□ 0.13
SDC4-201ENST00000372733 HEATR4Q86WZ0 1026 aa15.88■□□□□ 0.13
SDC4-201ENST00000372733 CDADC1Q9BWV3 514 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms