RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 SPATA2Q9UM82 520 aa14.34□□□□□ -0.11
NDC1-201ENST00000371429 ZNF823P16415 610 aa14.33□□□□□ -0.11
NDC1-201ENST00000371429 CD70P32970 193 aa14.33□□□□□ -0.11
NDC1-201ENST00000371429 PIK3CBP42338 1070 aa14.33□□□□□ -0.11
NDC1-201ENST00000371429 SCAPQ12770 1279 aa14.33□□□□□ -0.11
NDC1-201ENST00000371429 SCARB2Q14108 478 aa14.33□□□□□ -0.11
NDC1-201ENST00000371429 ZCCHC12Q6PEW1 402 aa14.33□□□□□ -0.11
NDC1-201ENST00000371429 SLC30A8Q8IWU4 369 aa14.33□□□□□ -0.11
NDC1-201ENST00000371429 KCNH6Q9H252 994 aa14.33□□□□□ -0.11
NDC1-201ENST00000371429 GDE1Q9NZC3 331 aa14.33□□□□□ -0.11
NDC1-201ENST00000371429 P2RX2Q9UBL9 471 aa14.33□□□□□ -0.11
NDC1-201ENST00000371429 KAT6AQ92794 2004 aa14.33□□□□□ -0.11
NDC1-201ENST00000371429 CLIC1O00299 241 aa14.33□□□□□ -0.12
NDC1-201ENST00000371429 VEGFDO43915 354 aa14.33□□□□□ -0.12
NDC1-201ENST00000371429 ZNF217O75362 1048 aa14.33□□□□□ -0.12
NDC1-201ENST00000371429 CXCR1P25024 350 aa14.33□□□□□ -0.12
NDC1-201ENST00000371429 DSTNP60981 165 aa14.33□□□□□ -0.12
NDC1-201ENST00000371429 OLR1P78380 273 aa14.33□□□□□ -0.12
NDC1-201ENST00000371429 ATP1A4Q13733 1029 aa14.33□□□□□ -0.12
NDC1-201ENST00000371429 CCNIQ14094 377 aa14.33□□□□□ -0.12
NDC1-201ENST00000371429 TAB1Q15750 504 aa14.33□□□□□ -0.12
NDC1-201ENST00000371429 RINLQ6ZS11 566 aa14.33□□□□□ -0.12
NDC1-201ENST00000371429 PARP8Q8N3A8 854 aa14.33□□□□□ -0.12
NDC1-201ENST00000371429 FAM156AQ8NDB6 213 aa14.33□□□□□ -0.12
NDC1-201ENST00000371429 MR1Q95460 341 aa14.33□□□□□ -0.12
NDC1-201ENST00000371429 SLC25A36Q96CQ1 311 aa14.33□□□□□ -0.12
NDC1-201ENST00000371429 TMED5Q9Y3A6 229 aa14.33□□□□□ -0.12
NDC1-201ENST00000371429 KPNA4O00629 521 aaPredicted RBP14.33□□□□□ -0.12
NDC1-201ENST00000371429 MAFKO60675 156 aa14.33□□□□□ -0.12
NDC1-201ENST00000371429 ZBTB11O95625 1053 aaPredicted RBP14.33□□□□□ -0.12
NDC1-201ENST00000371429 THRBP10828 461 aa14.33□□□□□ -0.12
NDC1-201ENST00000371429 SUOXP51687 545 aa14.33□□□□□ -0.12
NDC1-201ENST00000371429 RPS13P62277 151 aaKnown RBP14.33□□□□□ -0.12
NDC1-201ENST00000371429 ENPP2Q13822 863 aa14.33□□□□□ -0.12
NDC1-201ENST00000371429 PCBP2Q15366 365 aaKnown RBP eCLIP14.33□□□□□ -0.12
NDC1-201ENST00000371429 ZNF542PQ5EBM4 170 aa14.33□□□□□ -0.12
NDC1-201ENST00000371429 LPCAT4Q643R3 524 aa14.33□□□□□ -0.12
NDC1-201ENST00000371429 OR4K17Q8NGC6 315 aa14.33□□□□□ -0.12
NDC1-201ENST00000371429 ARMC5Q96C12 935 aa14.33□□□□□ -0.12
NDC1-201ENST00000371429 LINC00597Q9H2U6 94 aa14.33□□□□□ -0.12
NDC1-201ENST00000371429 PLGRKTQ9HBL7 147 aa14.33□□□□□ -0.12
NDC1-201ENST00000371429 KLRF1Q9NZS2 232 aa14.33□□□□□ -0.12
NDC1-201ENST00000371429 DHRS7Q9Y394 339 aa14.33□□□□□ -0.12
NDC1-201ENST00000371429 FAM92AA1XBS5 289 aa14.33□□□□□ -0.12
NDC1-201ENST00000371429 OR1I1O60431 355 aa14.33□□□□□ -0.12
NDC1-201ENST00000371429 SRP54P61011 504 aaKnown RBP14.33□□□□□ -0.12
NDC1-201ENST00000371429 CHRDL2Q6WN34 429 aa14.33□□□□□ -0.12
NDC1-201ENST00000371429 CENPNQ96H22 339 aaPredicted RBP14.33□□□□□ -0.12
NDC1-201ENST00000371429 MRGPRX2Q96LB1 330 aa14.33□□□□□ -0.12
NDC1-201ENST00000371429 CAMK1GQ96NX5 476 aa14.33□□□□□ -0.12
NDC1-201ENST00000371429 IFT27Q9BW83 186 aa14.33□□□□□ -0.12
NDC1-201ENST00000371429 LRRC3Q9BY71 257 aa14.33□□□□□ -0.12
NDC1-201ENST00000371429 PCDHGA2Q9Y5H1 932 aa14.33□□□□□ -0.12
NDC1-201ENST00000371429 H7C0S8 307 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 MID1O15344 667 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 WDR4P57081 412 aaKnown RBP14.32□□□□□ -0.12
NDC1-201ENST00000371429 PEX13Q92968 403 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 CASD1Q96PB1 797 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 NELL2Q99435 816 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 SEMA4FO95754 770 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 C6P13671 934 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 KCNC3Q14003 757 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 RFKQ969G6 155 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 ZIC5Q96T25 663 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 CD244Q9BZW8 370 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 HCFC1R1Q9NWW0 138 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 DMTF1Q9Y222 760 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 RNF11Q9Y3C5 154 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 H0YC42 278 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 SCDO00767 359 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 SLC22A2O15244 555 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 WBP4O75554 376 aaKnown RBP14.32□□□□□ -0.12
NDC1-201ENST00000371429 GLDCP23378 1020 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 ARFIP1P53367 373 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 XIAPP98170 497 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 BNIP1Q12981 228 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.32□□□□□ -0.12
NDC1-201ENST00000371429 ZNF648Q5T619 568 aaPredicted RBP14.32□□□□□ -0.12
NDC1-201ENST00000371429 KLHL17Q6TDP4 642 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 FRRS1Q6ZNA5 592 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 IQCHQ86VS3 1027 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 IL22RA1Q8N6P7 574 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 UBASH3BQ8TF42 649 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 FBRSQ9HAH7 460 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 PLEKHA1Q9HB21 404 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 FZD4Q9ULV1 537 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 CHST10O43529 356 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 SEC24AO95486 1093 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 GBAP04062 536 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 PFKLP17858 780 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 EN2P19622 333 aaPredicted RBP14.32□□□□□ -0.12
NDC1-201ENST00000371429 GGT5P36269 586 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 WNT7BP56706 349 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 DECR1Q16698 335 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.32□□□□□ -0.12
NDC1-201ENST00000371429 SLC25A24Q6NUK1 477 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 TSEN15Q8WW01 171 aaKnown RBP14.32□□□□□ -0.12
NDC1-201ENST00000371429 AP3S1Q92572 193 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 RNF31Q96EP0 1072 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 MMABQ96EY8 250 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms