RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 SYCE1LA8MT33 242 aa10.35□□□□□ -0.75
TPM3-212ENST00000368533 KLF8O95600 359 aaPredicted RBP10.35□□□□□ -0.75
TPM3-212ENST00000368533 COL9A1P20849 921 aa10.35□□□□□ -0.75
TPM3-212ENST00000368533 DRD3P35462 400 aa10.35□□□□□ -0.75
TPM3-212ENST00000368533 BDKRB1P46663 353 aa10.35□□□□□ -0.75
TPM3-212ENST00000368533 HTR6P50406 440 aa10.35□□□□□ -0.75
TPM3-212ENST00000368533 ATP6V0D1P61421 351 aa10.35□□□□□ -0.75
TPM3-212ENST00000368533 IFITM2Q01629 132 aa10.35□□□□□ -0.75
TPM3-212ENST00000368533 SYTL3Q4VX76 610 aa10.35□□□□□ -0.75
TPM3-212ENST00000368533 UBE2R2Q712K3 238 aaPredicted RBP10.35□□□□□ -0.75
TPM3-212ENST00000368533 IQCF2Q8IXL9 164 aa10.35□□□□□ -0.75
TPM3-212ENST00000368533 RNF175Q8N4F7 328 aa10.35□□□□□ -0.75
TPM3-212ENST00000368533 SMRP1Q8NCR6 262 aa10.35□□□□□ -0.75
TPM3-212ENST00000368533 CXorf40AQ8TE69 158 aa10.35□□□□□ -0.75
TPM3-212ENST00000368533 GLYATL1Q969I3 302 aa10.35□□□□□ -0.75
TPM3-212ENST00000368533 KCTD14Q9BQ13 255 aaPredicted RBP10.35□□□□□ -0.75
TPM3-212ENST00000368533 TRPV4Q9HBA0 871 aa10.35□□□□□ -0.75
TPM3-212ENST00000368533 CMTM6Q9NX76 183 aa10.35□□□□□ -0.75
TPM3-212ENST00000368533 CCDC154A6NI56 674 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 BBIP1A8MTZ0 92 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 ARNTLO00327 626 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 SLC31A1O15431 190 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 POU2F2P09086 479 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 MYCLP1P12525 358 aaPredicted RBP10.34□□□□□ -0.75
TPM3-212ENST00000368533 ENDOUP21128 410 aaKnown RBP10.34□□□□□ -0.75
TPM3-212ENST00000368533 MATN1P21941 496 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 DGKAP23743 735 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 ITGB7P26010 798 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 CTHP32929 405 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 OPRL1P41146 370 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 UFM1P61960 85 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 TXNL4AP83876 142 aaKnown RBP10.34□□□□□ -0.75
TPM3-212ENST00000368533 CST6Q15828 149 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 TMEM184AQ6ZMB5 413 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 TECPR1Q7Z6L1 1165 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 CFAP206Q8IYR0 622 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 CBARPQ8N350 705 aaPredicted RBP10.34□□□□□ -0.75
TPM3-212ENST00000368533 FBXL20Q96IG2 436 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 FAM126AQ9BYI3 521 aaPredicted RBP10.34□□□□□ -0.75
TPM3-212ENST00000368533 KCNK12Q9HB15 430 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 FARSBQ9NSD9 589 aaKnown RBP10.34□□□□□ -0.75
TPM3-212ENST00000368533 PCTPQ9UKL6 214 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 ANGPTL3Q9Y5C1 460 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 ARPC2O15144 300 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 SGTAO43765 313 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 KRT75O95678 551 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 ZNF30P17039 623 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 SLC6A2P23975 617 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 PSMA3P25788 255 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 RPIAP49247 311 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 IFITM3Q01628 133 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 E2F2Q14209 437 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 EIF4HQ15056 248 aaKnown RBP10.34□□□□□ -0.75
TPM3-212ENST00000368533 MOGQ16653 247 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 INAVAQ3KP66 663 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 TMEM196Q5HYL7 178 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 KANK2Q63ZY3 851 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 LETMD1Q6P1Q0 360 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 RFPL4BQ6ZWI9 263 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 RALGPS2Q86X27 583 aaPredicted RBP10.34□□□□□ -0.75
TPM3-212ENST00000368533 RHEBL1Q8TAI7 183 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 BTN2A2Q8WVV5 523 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 TEX37Q96LM6 180 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 ZNF597Q96LX8 424 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 CCDC138Q96M89 665 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 MBNL1Q9NR56 388 aaKnown RBP10.34□□□□□ -0.75
TPM3-212ENST00000368533 SLAMF8Q9P0V8 285 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 PCDHGA8Q9Y5G5 932 aa10.34□□□□□ -0.75
TPM3-212ENST00000368533 TAPBPO15533 448 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 SLC22A3O75751 556 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 SOD1P00441 154 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 FGF4P08620 206 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 MAGP20916 626 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 OXTRP30559 389 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 NFKB2Q00653 900 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 LIPEQ05469 1076 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 NFATC3Q12968 1075 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 HTR4Q13639 388 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 PLCL1Q15111 1095 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 PRMT9Q6P2P2 845 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 MACC1Q6ZN28 852 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 ERMP1Q7Z2K6 904 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 METTL6Q8TCB7 284 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 DTD2Q96FN9 168 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 MSLNLQ96KJ4 702 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 ALPK1Q96QP1 1244 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 TP63Q9H3D4 680 aaPredicted RBP10.33□□□□□ -0.76
TPM3-212ENST00000368533 IPPKQ9H8X2 491 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 POPDC3Q9HBV1 291 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 FBXL12Q9NXK8 326 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 PLAGL1Q9UM63 463 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 OAZ3Q9UMX2 235 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 RABL2BQ9UNT1 228 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 ERVK-11Q9UQG0 969 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 N6AMT1Q9Y5N5 214 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 A0A087WXM4 84 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 C1QTNF3-AMACRE9PGA6 284 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 E2F3O00716 465 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 BMP10O95393 424 aa10.33□□□□□ -0.76
TPM3-212ENST00000368533 HOXB2P14652 356 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms