RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 DPH1Q9BZG8 443 aa14.47□□□□□ -0.09
SMPDL3A-201ENST00000368440 ALG9Q9H6U8 611 aa14.47□□□□□ -0.09
SMPDL3A-201ENST00000368440 EURLQ9NYK6 297 aa14.47□□□□□ -0.09
SMPDL3A-201ENST00000368440 ACOT9Q9Y305 439 aa14.47□□□□□ -0.09
SMPDL3A-201ENST00000368440 URB1O60287 2271 aaKnown RBP14.47□□□□□ -0.09
SMPDL3A-201ENST00000368440 KMT2BQ9UMN6 2715 aaPredicted RBP14.47□□□□□ -0.09
SMPDL3A-201ENST00000368440 DSPP15924 2871 aaKnown RBP14.47□□□□□ -0.09
SMPDL3A-201ENST00000368440 TLDC2A0PJX2 215 aa14.46□□□□□ -0.09
SMPDL3A-201ENST00000368440 TARM1B6A8C7 271 aa14.46□□□□□ -0.09
SMPDL3A-201ENST00000368440 LTA4HP09960 611 aaKnown RBP14.46□□□□□ -0.09
SMPDL3A-201ENST00000368440 TFEBP19484 476 aa14.46□□□□□ -0.09
SMPDL3A-201ENST00000368440 TYK2P29597 1187 aa14.46□□□□□ -0.09
SMPDL3A-201ENST00000368440 ITGA1P56199 1179 aa14.46□□□□□ -0.09
SMPDL3A-201ENST00000368440 CDKL1Q00532 357 aa14.46□□□□□ -0.09
SMPDL3A-201ENST00000368440 ZNF844Q08AG5 666 aa14.46□□□□□ -0.09
SMPDL3A-201ENST00000368440 TGFBIQ15582 683 aa14.46□□□□□ -0.09
SMPDL3A-201ENST00000368440 FRMPD2BQ6IN97 320 aa14.46□□□□□ -0.09
SMPDL3A-201ENST00000368440 ZNF425Q6IV72 752 aa14.46□□□□□ -0.09
SMPDL3A-201ENST00000368440 BPHLQ86WA6 291 aaPredicted RBP14.46□□□□□ -0.09
SMPDL3A-201ENST00000368440 PAQR7Q86WK9 346 aa14.46□□□□□ -0.09
SMPDL3A-201ENST00000368440 CACNA2D3Q8IZS8 1091 aa14.46□□□□□ -0.09
SMPDL3A-201ENST00000368440 OR8K5Q8NH50 307 aa14.46□□□□□ -0.09
SMPDL3A-201ENST00000368440 N4BP2L2Q92802 583 aaPredicted RBP14.46□□□□□ -0.09
SMPDL3A-201ENST00000368440 EXT2Q93063 718 aa14.46□□□□□ -0.09
SMPDL3A-201ENST00000368440 KIAA1191Q96A73 305 aa14.46□□□□□ -0.09
SMPDL3A-201ENST00000368440 ZUFSPQ96AP4 578 aa14.46□□□□□ -0.09
SMPDL3A-201ENST00000368440 ARL8AQ96BM9 186 aa14.46□□□□□ -0.09
SMPDL3A-201ENST00000368440 OR4K3Q96R72 315 aa14.46□□□□□ -0.09
SMPDL3A-201ENST00000368440 PLCD4Q9BRC7 762 aa14.46□□□□□ -0.09
SMPDL3A-201ENST00000368440 AKIRIN1Q9H9L7 192 aaPredicted RBP14.46□□□□□ -0.09
SMPDL3A-201ENST00000368440 PLCL2Q9UPR0 1127 aa14.46□□□□□ -0.09
SMPDL3A-201ENST00000368440 MDC1Q14676 2089 aaKnown RBP14.46□□□□□ -0.1
SMPDL3A-201ENST00000368440 A0A087X1B8 175 aa14.46□□□□□ -0.1
SMPDL3A-201ENST00000368440 A0A0J9YVX5 310 aa14.46□□□□□ -0.1
SMPDL3A-201ENST00000368440 KRT38O76015 456 aa14.46□□□□□ -0.1
SMPDL3A-201ENST00000368440 CCNDBP1O95273 360 aa14.46□□□□□ -0.1
SMPDL3A-201ENST00000368440 ANXA5P08758 320 aa14.46□□□□□ -0.1
SMPDL3A-201ENST00000368440 SLCO1A2P46721 670 aa14.46□□□□□ -0.1
SMPDL3A-201ENST00000368440 KRT71Q3SY84 523 aa14.46□□□□□ -0.1
SMPDL3A-201ENST00000368440 TAF1BQ53T94 588 aaPredicted RBP14.46□□□□□ -0.1
SMPDL3A-201ENST00000368440 FBXO48Q5FWF7 155 aa14.46□□□□□ -0.1
SMPDL3A-201ENST00000368440 ADGRD1Q6QNK2 874 aa14.46□□□□□ -0.1
SMPDL3A-201ENST00000368440 RNF44Q7L0R7 432 aa14.46□□□□□ -0.1
SMPDL3A-201ENST00000368440 TAOK1Q7L7X3 1001 aa14.46□□□□□ -0.1
SMPDL3A-201ENST00000368440 ISCA2Q86U28 154 aa14.46□□□□□ -0.1
SMPDL3A-201ENST00000368440 GPSM1Q86YR5 675 aa14.46□□□□□ -0.1
SMPDL3A-201ENST00000368440 MCATQ8IVS2 390 aaKnown RBP14.46□□□□□ -0.1
SMPDL3A-201ENST00000368440 NLGN4XQ8N0W4 816 aa14.46□□□□□ -0.1
SMPDL3A-201ENST00000368440 PLD6Q8N2A8 252 aaKnown RBP14.46□□□□□ -0.1
SMPDL3A-201ENST00000368440 NLGN4YQ8NFZ3 816 aaPredicted RBP14.46□□□□□ -0.1
SMPDL3A-201ENST00000368440 RHBDF1Q96CC6 855 aa14.46□□□□□ -0.1
SMPDL3A-201ENST00000368440 VPS11Q9H270 941 aa14.46□□□□□ -0.1
SMPDL3A-201ENST00000368440 ZNF358Q9NW07 568 aa14.46□□□□□ -0.1
SMPDL3A-201ENST00000368440 TLK1Q9UKI8 766 aa14.46□□□□□ -0.1
SMPDL3A-201ENST00000368440 SSUH2Q9Y2M2 353 aa14.46□□□□□ -0.1
SMPDL3A-201ENST00000368440 FER1L5A0AVI2 2057 aa14.45□□□□□ -0.1
SMPDL3A-201ENST00000368440 LOC101059948A0A1B0GTJ6 334 aa14.45□□□□□ -0.1
SMPDL3A-201ENST00000368440 GOLGA6L10A6NI86 522 aa14.45□□□□□ -0.1
SMPDL3A-201ENST00000368440 E7EQ34 232 aa14.45□□□□□ -0.1
SMPDL3A-201ENST00000368440 H7BY64 318 aa14.45□□□□□ -0.1
SMPDL3A-201ENST00000368440 OR2B3O76000 313 aa14.45□□□□□ -0.1
SMPDL3A-201ENST00000368440 NPPBP16860 134 aa14.45□□□□□ -0.1
SMPDL3A-201ENST00000368440 WT1P19544 449 aaPredicted RBP14.45□□□□□ -0.1
SMPDL3A-201ENST00000368440 GLRBP48167 497 aa14.45□□□□□ -0.1
SMPDL3A-201ENST00000368440 ITPR1Q14643 2758 aa14.45□□□□□ -0.1
SMPDL3A-201ENST00000368440 PTCHD3Q3KNS1 767 aa14.45□□□□□ -0.1
SMPDL3A-201ENST00000368440 CAPN13Q6MZZ7 669 aaPredicted RBP14.45□□□□□ -0.1
SMPDL3A-201ENST00000368440 FBXO42Q6P3S6 717 aa14.45□□□□□ -0.1
SMPDL3A-201ENST00000368440 C19orf48Q6RUI8 117 aa14.45□□□□□ -0.1
SMPDL3A-201ENST00000368440 LCTLQ6UWM7 567 aa14.45□□□□□ -0.1
SMPDL3A-201ENST00000368440 C6orf15Q6UXA7 325 aaPredicted RBP14.45□□□□□ -0.1
SMPDL3A-201ENST00000368440 LRIG3Q6UXM1 1119 aa14.45□□□□□ -0.1
SMPDL3A-201ENST00000368440 ADCK2Q7Z695 626 aa14.45□□□□□ -0.1
SMPDL3A-201ENST00000368440 PLD3Q8IV08 490 aa14.45□□□□□ -0.1
SMPDL3A-201ENST00000368440 ATL1Q8WXF7 558 aa14.45□□□□□ -0.1
SMPDL3A-201ENST00000368440 PRAP1Q96NZ9 151 aa14.45□□□□□ -0.1
SMPDL3A-201ENST00000368440 GPR78Q96P69 363 aa14.45□□□□□ -0.1
SMPDL3A-201ENST00000368440 ATOH8Q96SQ7 321 aa14.45□□□□□ -0.1
SMPDL3A-201ENST00000368440 TMEM79Q9BSE2 394 aa14.45□□□□□ -0.1
SMPDL3A-201ENST00000368440 NMRAL1Q9HBL8 299 aa14.45□□□□□ -0.1
SMPDL3A-201ENST00000368440 STARD5Q9NSY2 213 aa14.45□□□□□ -0.1
SMPDL3A-201ENST00000368440 SERTAD3Q9UJW9 196 aa14.45□□□□□ -0.1
SMPDL3A-201ENST00000368440 RNF112Q9ULX5 631 aa14.45□□□□□ -0.1
SMPDL3A-201ENST00000368440 PCDHB3Q9Y5E6 796 aa14.45□□□□□ -0.1
SMPDL3A-201ENST00000368440 EPG5Q9HCE0 2579 aa14.45□□□□□ -0.1
SMPDL3A-201ENST00000368440 AHCTF1Q8WYP5 2266 aa14.45□□□□□ -0.1
SMPDL3A-201ENST00000368440 LOC105369274A0A096LPK9 316 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 LOC102723532A0A0G2JNH3 316 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 HAT1O14929 419 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 TAPBPO15533 448 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 EFSO43281 561 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 ZNF749O43361 778 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 CPNE3O75131 537 aaKnown RBP14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 SNRPAP09012 282 aaKnown RBP14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 CDH1P12830 882 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 CCND1P24385 295 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 CNTFP26441 200 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 SLC26A3P40879 764 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 GYS2P54840 703 aa14.44□□□□□ -0.1
SMPDL3A-201ENST00000368440 ABATP80404 500 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms