RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 CCDC138Q96M89 665 aa18.12■□□□□ 0.49
CKS1B-203ENST00000368439 ZFYVE21Q9BQ24 234 aa18.12■□□□□ 0.49
CKS1B-203ENST00000368439 PARVBQ9HBI1 364 aa18.12■□□□□ 0.49
CKS1B-203ENST00000368439 IFT80Q9P2H3 777 aaPredicted RBP18.12■□□□□ 0.49
CKS1B-203ENST00000368439 TLK1Q9UKI8 766 aa18.12■□□□□ 0.49
CKS1B-203ENST00000368439 IKZF3Q9UKT9 509 aa18.12■□□□□ 0.49
CKS1B-203ENST00000368439 SPENQ96T58 3664 aaKnown RBP18.11■□□□□ 0.49
CKS1B-203ENST00000368439 SUV39H1O43463 412 aa18.11■□□□□ 0.49
CKS1B-203ENST00000368439 CCNDBP1O95273 360 aa18.11■□□□□ 0.49
CKS1B-203ENST00000368439 C1QAP02745 245 aa18.11■□□□□ 0.49
CKS1B-203ENST00000368439 ALAS2P22557 587 aa18.11■□□□□ 0.49
CKS1B-203ENST00000368439 SSTR1P30872 391 aa18.11■□□□□ 0.49
CKS1B-203ENST00000368439 IL2P60568 153 aa18.11■□□□□ 0.49
CKS1B-203ENST00000368439 ABATP80404 500 aa18.11■□□□□ 0.49
CKS1B-203ENST00000368439 RELAQ04206 551 aa18.11■□□□□ 0.49
CKS1B-203ENST00000368439 PDAP1Q13442 181 aaKnown RBP18.11■□□□□ 0.49
CKS1B-203ENST00000368439 TSTA3Q13630 321 aaPredicted RBP18.11■□□□□ 0.49
CKS1B-203ENST00000368439 PRTGQ2VWP7 1150 aa18.11■□□□□ 0.49
CKS1B-203ENST00000368439 ZDHHC24Q6UX98 284 aa18.11■□□□□ 0.49
CKS1B-203ENST00000368439 STRA8Q7Z7C7 330 aa18.11■□□□□ 0.49
CKS1B-203ENST00000368439 TTC29Q8NA56 475 aaPredicted RBP18.11■□□□□ 0.49
CKS1B-203ENST00000368439 MCOLN3Q8TDD5 553 aa18.11■□□□□ 0.49
CKS1B-203ENST00000368439 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.11■□□□□ 0.49
CKS1B-203ENST00000368439 PDLIM5Q96HC4 596 aaKnown RBP18.11■□□□□ 0.49
CKS1B-203ENST00000368439 OR2A5Q96R48 311 aa18.11■□□□□ 0.49
CKS1B-203ENST00000368439 SAYSD1Q9NPB0 183 aa18.11■□□□□ 0.49
CKS1B-203ENST00000368439 ZNF71Q9NQZ8 489 aaPredicted RBP18.11■□□□□ 0.49
CKS1B-203ENST00000368439 CUEDC1Q9NWM3 386 aaPredicted RBP18.11■□□□□ 0.49
CKS1B-203ENST00000368439 CDC23Q9UJX2 597 aa18.11■□□□□ 0.49
CKS1B-203ENST00000368439 PADI2Q9Y2J8 665 aa18.11■□□□□ 0.49
CKS1B-203ENST00000368439 HYKKA2RU49 373 aa18.1■□□□□ 0.49
CKS1B-203ENST00000368439 ARGFXA6NJG6 315 aa18.1■□□□□ 0.49
CKS1B-203ENST00000368439 H0YGG7 62 aa18.1■□□□□ 0.49
CKS1B-203ENST00000368439 PIAS1O75925 651 aa18.1■□□□□ 0.49
CKS1B-203ENST00000368439 UMODP07911 640 aa18.1■□□□□ 0.49
CKS1B-203ENST00000368439 ARF3P61204 181 aaPredicted RBP18.1■□□□□ 0.49
CKS1B-203ENST00000368439 TBPL1P62380 186 aa18.1■□□□□ 0.49
CKS1B-203ENST00000368439 CHAF1BQ13112 559 aa18.1■□□□□ 0.49
CKS1B-203ENST00000368439 FAM214AQ32MH5 1076 aa18.1■□□□□ 0.49
CKS1B-203ENST00000368439 CAPN12Q6ZSI9 719 aa18.1■□□□□ 0.49
CKS1B-203ENST00000368439 PTRH1Q86Y79 214 aaKnown RBP18.1■□□□□ 0.49
CKS1B-203ENST00000368439 ARHGEF39Q8N4T4 335 aa18.1■□□□□ 0.49
CKS1B-203ENST00000368439 OR2Y1Q8NGV0 311 aa18.1■□□□□ 0.49
CKS1B-203ENST00000368439 FBXO25Q8TCJ0 367 aa18.1■□□□□ 0.49
CKS1B-203ENST00000368439 PYROXD1Q8WU10 500 aa18.1■□□□□ 0.49
CKS1B-203ENST00000368439 FKBP10Q96AY3 582 aa18.1■□□□□ 0.49
CKS1B-203ENST00000368439 C10orf90Q96M02 699 aa18.1■□□□□ 0.49
CKS1B-203ENST00000368439 C16orf45Q96MC5 204 aaPredicted RBP18.1■□□□□ 0.49
CKS1B-203ENST00000368439 SLC26A1Q9H2B4 701 aa18.1■□□□□ 0.49
CKS1B-203ENST00000368439 ABCF3Q9NUQ8 709 aa18.1■□□□□ 0.49
CKS1B-203ENST00000368439 NDOR1Q9UHB4 597 aa18.1■□□□□ 0.49
CKS1B-203ENST00000368439 GPN3Q9UHW5 284 aaPredicted RBP18.1■□□□□ 0.49
CKS1B-203ENST00000368439 SH2B3Q9UQQ2 575 aa18.1■□□□□ 0.49
CKS1B-203ENST00000368439 TP53TG5Q9Y2B4 290 aa18.1■□□□□ 0.49
CKS1B-203ENST00000368439 UTP11Q9Y3A2 253 aaKnown RBP18.1■□□□□ 0.49
CKS1B-203ENST00000368439 PTRH2Q9Y3E5 179 aaKnown RBP18.1■□□□□ 0.49
CKS1B-203ENST00000368439 FAM95CA0A1B0GW59 222 aa18.09■□□□□ 0.49
CKS1B-203ENST00000368439 CXorf49A8MYA2 514 aaPredicted RBP18.09■□□□□ 0.49
CKS1B-203ENST00000368439 HAT1O14929 419 aa18.09■□□□□ 0.49
CKS1B-203ENST00000368439 PDGFAP04085 211 aa18.09■□□□□ 0.49
CKS1B-203ENST00000368439 CD63P08962 238 aa18.09■□□□□ 0.49
CKS1B-203ENST00000368439 ZNF37AP17032 561 aaPredicted RBP18.09■□□□□ 0.49
CKS1B-203ENST00000368439 NR1D1P20393 614 aa18.09■□□□□ 0.49
CKS1B-203ENST00000368439 PLTPP55058 493 aa18.09■□□□□ 0.49
CKS1B-203ENST00000368439 TAS2R39P59534 338 aa18.09■□□□□ 0.49
CKS1B-203ENST00000368439 GPX6P59796 221 aa18.09■□□□□ 0.49
CKS1B-203ENST00000368439 SSPNQ14714 243 aa18.09■□□□□ 0.49
CKS1B-203ENST00000368439 LACTB2Q53H82 288 aaPredicted RBP18.09■□□□□ 0.49
CKS1B-203ENST00000368439 TCTN3Q6NUS6 607 aa18.09■□□□□ 0.49
CKS1B-203ENST00000368439 AGTRAPQ6RW13 159 aa18.09■□□□□ 0.49
CKS1B-203ENST00000368439 CYS1Q717R9 158 aa18.09■□□□□ 0.49
CKS1B-203ENST00000368439 OVCH1Q7RTY7 1134 aa18.09■□□□□ 0.49
CKS1B-203ENST00000368439 SGPP1Q9BX95 441 aa18.09■□□□□ 0.49
CKS1B-203ENST00000368439 PHACTR1Q9C0D0 580 aa18.09■□□□□ 0.49
CKS1B-203ENST00000368439 ATG10Q9H0Y0 220 aa18.09■□□□□ 0.49
CKS1B-203ENST00000368439 ING2Q9H160 280 aa18.09■□□□□ 0.49
CKS1B-203ENST00000368439 MLXIPLQ9NP71 852 aa18.09■□□□□ 0.49
CKS1B-203ENST00000368439 CCDC177Q9NQR7 707 aaPredicted RBP18.09■□□□□ 0.49
CKS1B-203ENST00000368439 MKRN2OSH3BPM6 223 aa18.08■□□□□ 0.48
CKS1B-203ENST00000368439 H7BY64 318 aa18.08■□□□□ 0.48
CKS1B-203ENST00000368439 SLC28A2O43868 658 aa18.08■□□□□ 0.48
CKS1B-203ENST00000368439 CEACAM4O75871 244 aa18.08■□□□□ 0.48
CKS1B-203ENST00000368439 ALBP02768 609 aa18.08■□□□□ 0.48
CKS1B-203ENST00000368439 ATXN8OSP0DMR3 200 aa18.08■□□□□ 0.48
CKS1B-203ENST00000368439 EZRP15311 586 aaKnown RBP18.08■□□□□ 0.48
CKS1B-203ENST00000368439 FOLR3P41439 243 aa18.08■□□□□ 0.48
CKS1B-203ENST00000368439 OR1D4P47884 311 aa18.08■□□□□ 0.48
CKS1B-203ENST00000368439 EMP3P54852 163 aa18.08■□□□□ 0.48
CKS1B-203ENST00000368439 ATP1A4Q13733 1029 aa18.08■□□□□ 0.48
CKS1B-203ENST00000368439 ZNF460Q14592 562 aa18.08■□□□□ 0.48
CKS1B-203ENST00000368439 PRAMEF13Q5VWM6 474 aa18.08■□□□□ 0.48
CKS1B-203ENST00000368439 SBSNQ6UWP8 590 aa18.08■□□□□ 0.48
CKS1B-203ENST00000368439 RAB43Q86YS6 212 aa18.08■□□□□ 0.48
CKS1B-203ENST00000368439 CEP97Q8IW35 865 aa18.08■□□□□ 0.48
CKS1B-203ENST00000368439 PALM2Q8IXS6 379 aa18.08■□□□□ 0.48
CKS1B-203ENST00000368439 PTERQ96BW5 349 aa18.08■□□□□ 0.48
CKS1B-203ENST00000368439 PRAP1Q96NZ9 151 aa18.08■□□□□ 0.48
CKS1B-203ENST00000368439 SPSB2Q99619 263 aa18.08■□□□□ 0.48
CKS1B-203ENST00000368439 RAB17Q9H0T7 212 aa18.08■□□□□ 0.48
CKS1B-203ENST00000368439 RHOJQ9H4E5 214 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms