RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 RAPGEF5Q92565 580 aa13.84□□□□□ -0.19
VAMP4-202ENST00000367740 YIPF2Q9BWQ6 316 aa13.84□□□□□ -0.19
VAMP4-202ENST00000367740 DMRT3Q9NQL9 472 aa13.84□□□□□ -0.19
VAMP4-202ENST00000367740 ZDHHC3Q9NYG2 299 aa13.84□□□□□ -0.19
VAMP4-202ENST00000367740 CRIM1Q9NZV1 1036 aa13.84□□□□□ -0.19
VAMP4-202ENST00000367740 CIDEBQ9UHD4 219 aa13.84□□□□□ -0.19
VAMP4-202ENST00000367740 FAM169AQ9Y6X4 670 aa13.84□□□□□ -0.19
VAMP4-202ENST00000367740 ANK3Q12955 4377 aaKnown RBP13.83□□□□□ -0.19
VAMP4-202ENST00000367740 C2orf81A6NN90 581 aa13.83□□□□□ -0.2
VAMP4-202ENST00000367740 A6NNC1 897 aa13.83□□□□□ -0.2
VAMP4-202ENST00000367740 GABRR3A8MPY1 467 aa13.83□□□□□ -0.2
VAMP4-202ENST00000367740 KDM1AO60341 852 aa13.83□□□□□ -0.2
VAMP4-202ENST00000367740 S1PR4O95977 384 aa13.83□□□□□ -0.2
VAMP4-202ENST00000367740 GSTM1P09488 218 aa13.83□□□□□ -0.2
VAMP4-202ENST00000367740 C8orf89P0DMQ9 161 aa13.83□□□□□ -0.2
VAMP4-202ENST00000367740 HOXB1P14653 301 aaPredicted RBP13.83□□□□□ -0.2
VAMP4-202ENST00000367740 ITGALP20701 1170 aa13.83□□□□□ -0.2
VAMP4-202ENST00000367740 ACRV1P26436 265 aa13.83□□□□□ -0.2
VAMP4-202ENST00000367740 PRKCIP41743 596 aa13.83□□□□□ -0.2
VAMP4-202ENST00000367740 OC90Q02509 493 aaPredicted RBP13.83□□□□□ -0.2
VAMP4-202ENST00000367740 GSTM4Q03013 218 aa13.83□□□□□ -0.2
VAMP4-202ENST00000367740 WASHC5Q12768 1159 aa13.83□□□□□ -0.2
VAMP4-202ENST00000367740 KEAP1Q14145 624 aa13.83□□□□□ -0.2
VAMP4-202ENST00000367740 BRD3Q15059 726 aa13.83□□□□□ -0.2
VAMP4-202ENST00000367740 MAPKAPK3Q16644 382 aa13.83□□□□□ -0.2
VAMP4-202ENST00000367740 LANCL3Q6ZV70 420 aa13.83□□□□□ -0.2
VAMP4-202ENST00000367740 ZC3H7AQ8IWR0 971 aaKnown RBP13.83□□□□□ -0.2
VAMP4-202ENST00000367740 CIARTQ8N365 385 aaPredicted RBP13.83□□□□□ -0.2
VAMP4-202ENST00000367740 SLC22A18Q96BI1 424 aa13.83□□□□□ -0.2
VAMP4-202ENST00000367740 IL17FQ96PD4 163 aa13.83□□□□□ -0.2
VAMP4-202ENST00000367740 KCNK13Q9HB14 408 aa13.83□□□□□ -0.2
VAMP4-202ENST00000367740 MKKSQ9NPJ1 570 aaPredicted RBP13.83□□□□□ -0.2
VAMP4-202ENST00000367740 ZNF407Q9C0G0 2248 aa13.83□□□□□ -0.2
VAMP4-202ENST00000367740 TRBV5-4A0A0C4DH59 114 aa13.82□□□□□ -0.2
VAMP4-202ENST00000367740 A0A0J9YVX5 310 aa13.82□□□□□ -0.2
VAMP4-202ENST00000367740 TARM1B6A8C7 271 aa13.82□□□□□ -0.2
VAMP4-202ENST00000367740 MYO1FO00160 1098 aa13.82□□□□□ -0.2
VAMP4-202ENST00000367740 CCL22O00626 93 aa13.82□□□□□ -0.2
VAMP4-202ENST00000367740 TFECO14948 347 aaPredicted RBP13.82□□□□□ -0.2
VAMP4-202ENST00000367740 CDC40O60508 579 aaKnown RBP eCLIP13.82□□□□□ -0.2
VAMP4-202ENST00000367740 SLC25A12O75746 678 aa13.82□□□□□ -0.2
VAMP4-202ENST00000367740 SUN1O94901 812 aa13.82□□□□□ -0.2
VAMP4-202ENST00000367740 EIF2S1P05198 315 aaKnown RBP13.82□□□□□ -0.2
VAMP4-202ENST00000367740 PRSS56P0CW18 603 aa13.82□□□□□ -0.2
VAMP4-202ENST00000367740 TFEBP19484 476 aa13.82□□□□□ -0.2
VAMP4-202ENST00000367740 CD9P21926 228 aa13.82□□□□□ -0.2
VAMP4-202ENST00000367740 KDELR1P24390 212 aa13.82□□□□□ -0.2
VAMP4-202ENST00000367740 SLC26A3P40879 764 aa13.82□□□□□ -0.2
VAMP4-202ENST00000367740 KIR2DL3P43628 341 aa13.82□□□□□ -0.2
VAMP4-202ENST00000367740 SF1Q15637 639 aaKnown RBP13.82□□□□□ -0.2
VAMP4-202ENST00000367740 SYT16Q17RD7 645 aa13.82□□□□□ -0.2
VAMP4-202ENST00000367740 PRTGQ2VWP7 1150 aa13.82□□□□□ -0.2
VAMP4-202ENST00000367740 CMPK2Q5EBM0 449 aa13.82□□□□□ -0.2
VAMP4-202ENST00000367740 ZNF468Q5VIY5 522 aaPredicted RBP13.82□□□□□ -0.2
VAMP4-202ENST00000367740 UNC5DQ6UXZ4 953 aa13.82□□□□□ -0.2
VAMP4-202ENST00000367740 ACAD11Q709F0 780 aa13.82□□□□□ -0.2
VAMP4-202ENST00000367740 RNF44Q7L0R7 432 aa13.82□□□□□ -0.2
VAMP4-202ENST00000367740 SERPINA9Q86WD7 417 aa13.82□□□□□ -0.2
VAMP4-202ENST00000367740 PHC2Q8IXK0 858 aa13.82□□□□□ -0.2
VAMP4-202ENST00000367740 HORMAD2Q8N7B1 307 aa13.82□□□□□ -0.2
VAMP4-202ENST00000367740 CABS1Q96KC9 395 aa13.82□□□□□ -0.2
VAMP4-202ENST00000367740 LIMA1Q9UHB6 759 aaKnown RBP13.82□□□□□ -0.2
VAMP4-202ENST00000367740 CDC14AQ9UNH5 594 aa13.82□□□□□ -0.2
VAMP4-202ENST00000367740 CHD3Q12873 2000 aaKnown RBP13.81□□□□□ -0.2
VAMP4-202ENST00000367740 SLC5A10A0PJK1 596 aa13.81□□□□□ -0.2
VAMP4-202ENST00000367740 USP27XA6NNY8 438 aa13.81□□□□□ -0.2
VAMP4-202ENST00000367740 APOL1O14791 398 aa13.81□□□□□ -0.2
VAMP4-202ENST00000367740 PRPF4O43172 522 aaKnown RBP eCLIP13.81□□□□□ -0.2
VAMP4-202ENST00000367740 AGTP01019 485 aa13.81□□□□□ -0.2
VAMP4-202ENST00000367740 ZNF140P52738 457 aaPredicted RBP13.81□□□□□ -0.2
VAMP4-202ENST00000367740 PPP2R2BQ00005 443 aa13.81□□□□□ -0.2
VAMP4-202ENST00000367740 MPP3Q13368 585 aa13.81□□□□□ -0.2
VAMP4-202ENST00000367740 GRB7Q14451 532 aa13.81□□□□□ -0.2
VAMP4-202ENST00000367740 CT47A1Q5JQC4 288 aaPredicted RBP13.81□□□□□ -0.2
VAMP4-202ENST00000367740 CPEB2Q7Z5Q1 589 aaKnown RBP13.81□□□□□ -0.2
VAMP4-202ENST00000367740 ZNF227Q86WZ6 799 aa13.81□□□□□ -0.2
VAMP4-202ENST00000367740 OR2L8Q8NGY9 312 aa13.81□□□□□ -0.2
VAMP4-202ENST00000367740 ELMO1Q92556 727 aa13.81□□□□□ -0.2
VAMP4-202ENST00000367740 ZUFSPQ96AP4 578 aa13.81□□□□□ -0.2
VAMP4-202ENST00000367740 MVB12AQ96EY5 273 aa13.81□□□□□ -0.2
VAMP4-202ENST00000367740 FCRL5Q96RD9 977 aa13.81□□□□□ -0.2
VAMP4-202ENST00000367740 FSD1LQ9BXM9 530 aa13.81□□□□□ -0.2
VAMP4-202ENST00000367740 NEUROD4Q9HD90 331 aa13.81□□□□□ -0.2
VAMP4-202ENST00000367740 CBLCQ9ULV8 474 aa13.81□□□□□ -0.2
VAMP4-202ENST00000367740 KLK4Q9Y5K2 254 aa13.81□□□□□ -0.2
VAMP4-202ENST00000367740 C5orf60A6NFR6 353 aa13.8□□□□□ -0.2
VAMP4-202ENST00000367740 C3orf70A6NLC5 250 aaPredicted RBP13.8□□□□□ -0.2
VAMP4-202ENST00000367740 ZNF487B1APH4 448 aa13.8□□□□□ -0.2
VAMP4-202ENST00000367740 HS6ST1O60243 411 aa13.8□□□□□ -0.2
VAMP4-202ENST00000367740 CYP1A2P05177 515 aa13.8□□□□□ -0.2
VAMP4-202ENST00000367740 ERVK-10P10266 1014 aa13.8□□□□□ -0.2
VAMP4-202ENST00000367740 PSMB5P28074 263 aa13.8□□□□□ -0.2
VAMP4-202ENST00000367740 MC4RP32245 332 aa13.8□□□□□ -0.2
VAMP4-202ENST00000367740 RFC3P40938 356 aa13.8□□□□□ -0.2
VAMP4-202ENST00000367740 NKX6-1P78426 367 aaPredicted RBP13.8□□□□□ -0.2
VAMP4-202ENST00000367740 KLHL30Q0D2K2 578 aa13.8□□□□□ -0.2
VAMP4-202ENST00000367740 GPR33Q49SQ1 333 aa13.8□□□□□ -0.2
VAMP4-202ENST00000367740 FIGNQ5HY92 759 aa13.8□□□□□ -0.2
VAMP4-202ENST00000367740 APTXQ7Z2E3 356 aaKnown RBP13.8□□□□□ -0.2
VAMP4-202ENST00000367740 LIX1LQ8IVB5 337 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms