RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 PDGFDQ9GZP0 370 aaPredicted RBP12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 PRDM12Q9H4Q4 367 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 NWD1Q149M9 1564 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 A0A1W2PRQ8 180 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 NEMP2A6NFY4 417 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 GFOD2Q3B7J2 385 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 ESX1Q8N693 406 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 SCGB1C1Q8TD33 95 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 SSU72Q9NP77 194 aaKnown RBP12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 HSPA12AO43301 675 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 TAS2R40P59535 323 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 GLYATL1P3A0A0U1RQE8 302 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 TOXO94900 526 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 CKMT2P17540 419 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 ITPKAP23677 461 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 CDK18Q07002 472 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 CTC1Q2NKJ3 1217 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 SLC30A10Q6XR72 485 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 MOB2Q70IA6 237 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 LCN9Q8WX39 176 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 TTPALQ9BTX7 342 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 TMPRSS4Q9NRS4 437 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 TAS2R10Q9NYW0 307 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 PCDHGA11Q9Y5H2 935 aa12.91□□□□□ -0.34
SRGAP3-201ENST00000360413 MT-ND5P03915 603 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 NKX2-5P52952 324 aaPredicted RBP12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 HERV-K104P61576 105 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 GANABQ14697 944 aaKnown RBP12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 KIAA0319Q5VV43 1072 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 KIAA1161Q6NSJ0 714 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 NCEH1Q6PIU2 408 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 SLC26A9Q7LBE3 791 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 SPPL2BQ8TCT7 592 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 LDAHQ9H6V9 325 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 SCP2D1Q9UJQ7 156 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 FER1L4A9Z1Z3 1794 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 A0A1W2PQ45 241 aaPredicted RBP12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 A0A1W2PQY0 241 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 IFNA17P01571 189 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 ZNF35P13682 527 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 TOP6BLQ8N6T0 577 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 DNAAF1Q8NEP3 725 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 EMID1Q96A84 441 aaPredicted RBP12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 ZNF878C9JN71 531 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 AGPSO00116 658 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 ABCB7O75027 752 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 IFNA1P01562 189 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 GLP1RP43220 463 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 FAM174BQ3ZCQ3 159 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 SPIN3Q5JUX0 258 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 CACUL1Q86Y37 369 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 S100A16Q96FQ6 103 aaKnown RBP12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 ZNF773Q6PK81 442 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 SCRN2Q96FV2 425 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 C7orf34Q96L11 122 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 CLCA3PQ9Y6N3 262 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 CIB4A0PJX0 185 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 RAB3BP20337 219 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 MAXP61244 160 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 FMO1Q01740 532 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 GTF2H2Q13888 395 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 TRAM1Q15629 374 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 AKR1C8PQ5T2L2 129 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 GTF2H2CQ6P1K8 395 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 OR7G2Q8NG99 324 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 ENAMQ9NRM1 1142 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 EIF2B4Q9UI10 523 aaKnown RBP12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 PCYT1BQ9Y5K3 369 aaPredicted RBP12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 DISP1Q96F81 1524 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 AGAP5A6NIR3 686 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 RPP40O75818 363 aaKnown RBP12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 ZNF182P17025 639 aaPredicted RBP12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 ACTR1BP42025 376 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 SLC25A52Q3SY17 297 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 RELL1Q8IUW5 271 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 C2orf15Q8WU43 125 aaKnown RBP12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 ALG3Q92685 438 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 TREX2Q9BQ50 279 aaPredicted RBP12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 LRRC3Q9BY71 257 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 MYO3AQ8NEV4 1616 aa12.9□□□□□ -0.34
SRGAP3-201ENST00000360413 C2orf92A0A1B0GVN3 265 aa12.9□□□□□ -0.35
SRGAP3-201ENST00000360413 ELOA3DA6NLF2 546 aaPredicted RBP12.9□□□□□ -0.35
SRGAP3-201ENST00000360413 TAS2R43P59537 309 aa12.9□□□□□ -0.35
SRGAP3-201ENST00000360413 PUM1Q14671 1186 aaKnown RBP eCLIP12.9□□□□□ -0.35
SRGAP3-201ENST00000360413 ELOA3BQ3SY89 546 aa12.9□□□□□ -0.35
SRGAP3-201ENST00000360413 ILDR1Q86SU0 546 aaPredicted RBP12.9□□□□□ -0.35
SRGAP3-201ENST00000360413 ZNF598Q86UK7 904 aaKnown RBP12.9□□□□□ -0.35
SRGAP3-201ENST00000360413 ELOA3Q8NG57 546 aa12.9□□□□□ -0.35
SRGAP3-201ENST00000360413 C22orf15Q8WYQ4 148 aa12.9□□□□□ -0.35
SRGAP3-201ENST00000360413 ULBP1Q9BZM6 244 aa12.9□□□□□ -0.35
SRGAP3-201ENST00000360413 PI15O43692 258 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 LPLP06858 475 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 KLK3P07288 261 aaPredicted RBP12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 NKX6-1P78426 367 aaPredicted RBP12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 SLC3A1Q07837 685 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 POLR2J3Q9H1A7 115 aaKnown RBP12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 SH3PXD2BA1X283 911 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 F5H0A9 414 aaPredicted RBP12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 CCR8P51685 355 aa12.89□□□□□ -0.35
SRGAP3-201ENST00000360413 ENPP2Q13822 863 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms