RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 RNF145Q96MT1 663 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 MTERF1Q99551 399 aaKnown RBP17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 SEPHS2Q99611 448 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 CHID1Q9BWS9 393 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 EHD1Q9H4M9 534 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 KAT8Q9H7Z6 458 aaKnown RBP17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 FAM120CQ9NX05 1096 aaKnown RBP17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 MSRAQ9UJ68 235 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 PADI4Q9UM07 663 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 DNMT3AQ9Y6K1 912 aaPredicted RBP17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 STON1Q9Y6Q2 735 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 RNF103-CHMP3A0A140T963 221 aa17.69■□□□□ 0.42
PDLIM7-203ENST00000359895 ARHGAP10A1A4S6 786 aa17.69■□□□□ 0.42
PDLIM7-203ENST00000359895 FAM149AA5PLN7 773 aa17.69■□□□□ 0.42
PDLIM7-203ENST00000359895 RFXANKO14593 260 aa17.69■□□□□ 0.42
PDLIM7-203ENST00000359895 DEAF1O75398 565 aaPredicted RBP17.69■□□□□ 0.42
PDLIM7-203ENST00000359895 ADH1BP00325 375 aa17.69■□□□□ 0.42
PDLIM7-203ENST00000359895 ACADLP28330 430 aa17.69■□□□□ 0.42
PDLIM7-203ENST00000359895 BMP8BP34820 402 aa17.69■□□□□ 0.42
PDLIM7-203ENST00000359895 SOX11P35716 441 aa17.69■□□□□ 0.42
PDLIM7-203ENST00000359895 ABHD18Q0P651 414 aa17.69■□□□□ 0.42
PDLIM7-203ENST00000359895 LAPTM5Q13571 262 aa17.69■□□□□ 0.42
PDLIM7-203ENST00000359895 ENPP2Q13822 863 aa17.69■□□□□ 0.42
PDLIM7-203ENST00000359895 DDX39BQ13838 428 aaKnown RBP17.69■□□□□ 0.42
PDLIM7-203ENST00000359895 HIST2H2ACQ16777 129 aaPredicted RBP17.69■□□□□ 0.42
PDLIM7-203ENST00000359895 DUOXA1Q1HG43 343 aa17.69■□□□□ 0.42
PDLIM7-203ENST00000359895 ITPRIPL2Q3MIP1 535 aa17.69■□□□□ 0.42
PDLIM7-203ENST00000359895 PLA2G4EQ3MJ16 856 aa17.69■□□□□ 0.42
PDLIM7-203ENST00000359895 HIST2H2AA3Q6FI13 130 aa17.69■□□□□ 0.42
PDLIM7-203ENST00000359895 PNCKQ6P2M8 343 aa17.69■□□□□ 0.42
PDLIM7-203ENST00000359895 CRTC3Q6UUV7 619 aa17.69■□□□□ 0.42
PDLIM7-203ENST00000359895 CARM1Q86X55 608 aa17.69■□□□□ 0.42
PDLIM7-203ENST00000359895 EPHX4Q8IUS5 362 aa17.69■□□□□ 0.42
PDLIM7-203ENST00000359895 ST13P5Q8NFI4 369 aaPredicted RBP17.69■□□□□ 0.42
PDLIM7-203ENST00000359895 OR7G3Q8NG95 312 aa17.69■□□□□ 0.42
PDLIM7-203ENST00000359895 SETD7Q8WTS6 366 aaKnown RBP17.69■□□□□ 0.42
PDLIM7-203ENST00000359895 FIG4Q92562 907 aa17.69■□□□□ 0.42
PDLIM7-203ENST00000359895 NEIL2Q969S2 332 aa17.69■□□□□ 0.42
PDLIM7-203ENST00000359895 MRPS26Q9BYN8 205 aaKnown RBP17.69■□□□□ 0.42
PDLIM7-203ENST00000359895 ANKRD60Q9BZ19 345 aa17.69■□□□□ 0.42
PDLIM7-203ENST00000359895 PLA2G2FQ9BZM2 168 aa17.69■□□□□ 0.42
PDLIM7-203ENST00000359895 RSPH9Q9H1X1 276 aaPredicted RBP17.69■□□□□ 0.42
PDLIM7-203ENST00000359895 HCN2Q9UL51 889 aa17.69■□□□□ 0.42
PDLIM7-203ENST00000359895 OAZ3Q9UMX2 235 aa17.69■□□□□ 0.42
PDLIM7-203ENST00000359895 AK5Q9Y6K8 562 aa17.69■□□□□ 0.42
PDLIM7-203ENST00000359895 TRPM6Q9BX84 2022 aa17.69■□□□□ 0.42
PDLIM7-203ENST00000359895 CXCR6O00574 342 aa17.68■□□□□ 0.42
PDLIM7-203ENST00000359895 CLOCKO15516 846 aa17.68■□□□□ 0.42
PDLIM7-203ENST00000359895 LRATO95237 230 aa17.68■□□□□ 0.42
PDLIM7-203ENST00000359895 SLC34A2O95436 690 aa17.68■□□□□ 0.42
PDLIM7-203ENST00000359895 RETP07949 1114 aa17.68■□□□□ 0.42
PDLIM7-203ENST00000359895 C1GALT1C1LP0DN25 315 aa17.68■□□□□ 0.42
PDLIM7-203ENST00000359895 PCNAP12004 261 aa17.68■□□□□ 0.42
PDLIM7-203ENST00000359895 MYBPC1Q00872 1141 aa17.68■□□□□ 0.42
PDLIM7-203ENST00000359895 AGERQ15109 404 aa17.68■□□□□ 0.42
PDLIM7-203ENST00000359895 RAB30Q15771 203 aa17.68■□□□□ 0.42
PDLIM7-203ENST00000359895 NHSL2Q5HYW2 709 aa17.68■□□□□ 0.42
PDLIM7-203ENST00000359895 SYCE2Q6PIF2 218 aa17.68■□□□□ 0.42
PDLIM7-203ENST00000359895 XKR5Q6UX68 686 aa17.68■□□□□ 0.42
PDLIM7-203ENST00000359895 TMPRSS11BQ86T26 416 aa17.68■□□□□ 0.42
PDLIM7-203ENST00000359895 LRRTM4Q86VH4 590 aa17.68■□□□□ 0.42
PDLIM7-203ENST00000359895 OR8J2Q8NGG1 315 aa17.68■□□□□ 0.42
PDLIM7-203ENST00000359895 FAM162AQ96A26 154 aa17.68■□□□□ 0.42
PDLIM7-203ENST00000359895 MRPL38Q96DV4 380 aaKnown RBP17.68■□□□□ 0.42
PDLIM7-203ENST00000359895 C11orf24Q96F05 449 aaPredicted RBP17.68■□□□□ 0.42
PDLIM7-203ENST00000359895 EGLN2Q96KS0 407 aa17.68■□□□□ 0.42
PDLIM7-203ENST00000359895 EBPLQ9BY08 206 aa17.68■□□□□ 0.42
PDLIM7-203ENST00000359895 PBX4Q9BYU1 374 aa17.68■□□□□ 0.42
PDLIM7-203ENST00000359895 IKZF5Q9H5V7 419 aa17.68■□□□□ 0.42
PDLIM7-203ENST00000359895 NDUFA13Q9P0J0 144 aa17.68■□□□□ 0.42
PDLIM7-203ENST00000359895 CIDEBQ9UHD4 219 aa17.68■□□□□ 0.42
PDLIM7-203ENST00000359895 ADGRE2Q9UHX3 823 aa17.68■□□□□ 0.42
PDLIM7-203ENST00000359895 ZNF639Q9UID6 485 aa17.68■□□□□ 0.42
PDLIM7-203ENST00000359895 KLHL33A6NCF5 533 aa17.67■□□□□ 0.42
PDLIM7-203ENST00000359895 MAGEB17A8MXT2 336 aa17.67■□□□□ 0.42
PDLIM7-203ENST00000359895 EVPLLA8MZ36 301 aa17.67■□□□□ 0.42
PDLIM7-203ENST00000359895 FOXE1O00358 373 aaPredicted RBP17.67■□□□□ 0.42
PDLIM7-203ENST00000359895 ACOX3O15254 700 aa17.67■□□□□ 0.42
PDLIM7-203ENST00000359895 PI15O43692 258 aa17.67■□□□□ 0.42
PDLIM7-203ENST00000359895 COX7A2P14406 83 aa17.67■□□□□ 0.42
PDLIM7-203ENST00000359895 NPPBP16860 134 aa17.67■□□□□ 0.42
PDLIM7-203ENST00000359895 KELP23276 732 aa17.67■□□□□ 0.42
PDLIM7-203ENST00000359895 TEAD1P28347 426 aa17.67■□□□□ 0.42
PDLIM7-203ENST00000359895 PTPN6P29350 595 aa17.67■□□□□ 0.42
PDLIM7-203ENST00000359895 DRD3P35462 400 aa17.67■□□□□ 0.42
PDLIM7-203ENST00000359895 CAMK2GQ13555 558 aaPredicted RBP17.67■□□□□ 0.42
PDLIM7-203ENST00000359895 NFE2L1Q14494 772 aa17.67■□□□□ 0.42
PDLIM7-203ENST00000359895 STARD3Q14849 445 aa17.67■□□□□ 0.42
PDLIM7-203ENST00000359895 CST6Q15828 149 aa17.67■□□□□ 0.42
PDLIM7-203ENST00000359895 GTDC1Q4AE62 458 aa17.67■□□□□ 0.42
PDLIM7-203ENST00000359895 LIN52Q52LA3 116 aa17.67■□□□□ 0.42
PDLIM7-203ENST00000359895 ATAT1Q5SQI0 421 aa17.67■□□□□ 0.42
PDLIM7-203ENST00000359895 OR4F3Q6IEY1 312 aa17.67■□□□□ 0.42
PDLIM7-203ENST00000359895 GCNT7Q6ZNI0 430 aa17.67■□□□□ 0.42
PDLIM7-203ENST00000359895 C11orf96Q7Z7L8 435 aa17.67■□□□□ 0.42
PDLIM7-203ENST00000359895 PDZD3Q86UT5 571 aa17.67■□□□□ 0.42
PDLIM7-203ENST00000359895 AMZ2Q86W34 360 aa17.67■□□□□ 0.42
PDLIM7-203ENST00000359895 HEATR4Q86WZ0 1026 aa17.67■□□□□ 0.42
PDLIM7-203ENST00000359895 TDHQ8IZJ6 230 aa17.67■□□□□ 0.42
PDLIM7-203ENST00000359895 RNF175Q8N4F7 328 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms