RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 RCBTB1Q8NDN9 531 aa14.67□□□□□ -0.06
TPM1-206ENST00000358278 SLC5A11Q8WWX8 675 aa14.67□□□□□ -0.06
TPM1-206ENST00000358278 L3HYPDHQ96EM0 354 aa14.67□□□□□ -0.06
TPM1-206ENST00000358278 DEPDC7Q96QD5 511 aa14.67□□□□□ -0.06
TPM1-206ENST00000358278 DPH7Q9BTV6 452 aa14.67□□□□□ -0.06
TPM1-206ENST00000358278 CAPS2Q9BXY5 557 aa14.67□□□□□ -0.06
TPM1-206ENST00000358278 SLC6A20Q9NP91 592 aa14.67□□□□□ -0.06
TPM1-206ENST00000358278 CUEDC1Q9NWM3 386 aaPredicted RBP14.67□□□□□ -0.06
TPM1-206ENST00000358278 GPRC5BQ9NZH0 403 aa14.67□□□□□ -0.06
TPM1-206ENST00000358278 PCTPQ9UKL6 214 aa14.67□□□□□ -0.06
TPM1-206ENST00000358278 CLCA2Q9UQC9 943 aa14.67□□□□□ -0.06
TPM1-206ENST00000358278 KLHL20Q9Y2M5 609 aa14.67□□□□□ -0.06
TPM1-206ENST00000358278 WDR91A4D1P6 747 aa14.66□□□□□ -0.06
TPM1-206ENST00000358278 SLC9B1P1A6NJY1 282 aa14.66□□□□□ -0.06
TPM1-206ENST00000358278 E7EQ34 232 aa14.66□□□□□ -0.06
TPM1-206ENST00000358278 CLGNO14967 610 aa14.66□□□□□ -0.06
TPM1-206ENST00000358278 TOX3O15405 576 aaPredicted RBP14.66□□□□□ -0.06
TPM1-206ENST00000358278 TRIM13O60858 407 aa14.66□□□□□ -0.06
TPM1-206ENST00000358278 ZBTB11O95625 1053 aaPredicted RBP14.66□□□□□ -0.06
TPM1-206ENST00000358278 MT-CO3P00414 261 aa14.66□□□□□ -0.06
TPM1-206ENST00000358278 BPGMP07738 259 aa14.66□□□□□ -0.06
TPM1-206ENST00000358278 CDH1P12830 882 aa14.66□□□□□ -0.06
TPM1-206ENST00000358278 GRIA3P42263 894 aa14.66□□□□□ -0.06
TPM1-206ENST00000358278 PDX1P52945 283 aa14.66□□□□□ -0.06
TPM1-206ENST00000358278 NAGLUP54802 743 aa14.66□□□□□ -0.06
TPM1-206ENST00000358278 DNAJB13P59910 316 aa14.66□□□□□ -0.06
TPM1-206ENST00000358278 TRA2AQ13595 282 aaKnown RBP eCLIP14.66□□□□□ -0.06
TPM1-206ENST00000358278 RPS27LQ71UM5 84 aaKnown RBP14.66□□□□□ -0.06
TPM1-206ENST00000358278 GOLGA7Q7Z5G4 137 aa14.66□□□□□ -0.06
TPM1-206ENST00000358278 NUDCD3Q8IVD9 361 aa14.66□□□□□ -0.06
TPM1-206ENST00000358278 C19orf47Q8N9M1 422 aaKnown RBP14.66□□□□□ -0.06
TPM1-206ENST00000358278 PPP1R14CQ8TAE6 165 aa14.66□□□□□ -0.06
TPM1-206ENST00000358278 NSUN5Q96P11 429 aaKnown RBP14.66□□□□□ -0.06
TPM1-206ENST00000358278 TRAPPC9Q96Q05 1148 aa14.66□□□□□ -0.06
TPM1-206ENST00000358278 C1QTNF3Q9BXJ4 246 aa14.66□□□□□ -0.06
TPM1-206ENST00000358278 SEMA4BQ9NPR2 832 aaPredicted RBP14.66□□□□□ -0.06
TPM1-206ENST00000358278 ACSS2Q9NR19 701 aa14.66□□□□□ -0.06
TPM1-206ENST00000358278 PDP2Q9P2J9 529 aa14.66□□□□□ -0.06
TPM1-206ENST00000358278 WDFY3Q8IZQ1 3526 aa14.66□□□□□ -0.06
TPM1-206ENST00000358278 H3BQF6 201 aa14.66□□□□□ -0.06
TPM1-206ENST00000358278 H7BY64 318 aa14.66□□□□□ -0.06
TPM1-206ENST00000358278 AGRPO00253 132 aa14.66□□□□□ -0.06
TPM1-206ENST00000358278 BIRC5O15392 142 aa14.66□□□□□ -0.06
TPM1-206ENST00000358278 CSO75390 466 aaKnown RBP14.66□□□□□ -0.06
TPM1-206ENST00000358278 ANKRD34CP0C6C1 535 aa14.66□□□□□ -0.06
TPM1-206ENST00000358278 DHRS4L1P0CG22 281 aa14.66□□□□□ -0.06
TPM1-206ENST00000358278 MLLT3P42568 568 aaPredicted RBP14.66□□□□□ -0.06
TPM1-206ENST00000358278 ZFP36L1Q07352 338 aaKnown RBP14.66□□□□□ -0.06
TPM1-206ENST00000358278 PUM1Q14671 1186 aaKnown RBP eCLIP14.66□□□□□ -0.065e-9■□□□□ 8.1
TPM1-206ENST00000358278 RBBP7Q16576 425 aa14.66□□□□□ -0.06
TPM1-206ENST00000358278 CDCP2Q5VXM1 449 aa14.66□□□□□ -0.06
TPM1-206ENST00000358278 FIGLAQ6QHK4 219 aa14.66□□□□□ -0.06
TPM1-206ENST00000358278 ZNF483Q8TF39 744 aaPredicted RBP14.66□□□□□ -0.06
TPM1-206ENST00000358278 ATP6V1E2Q96A05 226 aa14.66□□□□□ -0.06
TPM1-206ENST00000358278 PRAP1Q96NZ9 151 aa14.66□□□□□ -0.06
TPM1-206ENST00000358278 STRADBQ9C0K7 418 aa14.66□□□□□ -0.06
TPM1-206ENST00000358278 ZNF768Q9H5H4 540 aaKnown RBP14.66□□□□□ -0.06
TPM1-206ENST00000358278 IPPKQ9H8X2 491 aa14.66□□□□□ -0.06
TPM1-206ENST00000358278 SNX7Q9UNH6 387 aa14.66□□□□□ -0.06
TPM1-206ENST00000358278 IGKV1-8A0A0C4DH67 115 aa14.65□□□□□ -0.06
TPM1-206ENST00000358278 HRH2P25021 359 aa14.65□□□□□ -0.06
TPM1-206ENST00000358278 CCKBRP32239 447 aa14.65□□□□□ -0.06
TPM1-206ENST00000358278 CCR8P51685 355 aa14.65□□□□□ -0.06
TPM1-206ENST00000358278 CCNG1P51959 295 aa14.65□□□□□ -0.06
TPM1-206ENST00000358278 CDH13P55290 713 aa14.65□□□□□ -0.06
TPM1-206ENST00000358278 WDR4P57081 412 aaKnown RBP14.65□□□□□ -0.06
TPM1-206ENST00000358278 HSD11B2P80365 405 aa14.65□□□□□ -0.06
TPM1-206ENST00000358278 CLCQ05315 142 aa14.65□□□□□ -0.06
TPM1-206ENST00000358278 ISXQ2M1V0 245 aa14.65□□□□□ -0.06
TPM1-206ENST00000358278 UNC50Q53HI1 259 aa14.65□□□□□ -0.06
TPM1-206ENST00000358278 XKR6Q5GH73 641 aa14.65□□□□□ -0.06
TPM1-206ENST00000358278 CATSPEREQ5SY80 951 aa14.65□□□□□ -0.06
TPM1-206ENST00000358278 ZCCHC23Q6ZST2 131 aa14.65□□□□□ -0.06
TPM1-206ENST00000358278 ARHGAP22Q7Z5H3 698 aa14.65□□□□□ -0.06
TPM1-206ENST00000358278 KMT5CQ86Y97 462 aa14.65□□□□□ -0.06
TPM1-206ENST00000358278 MYLK4Q86YV6 388 aaPredicted RBP14.65□□□□□ -0.06
TPM1-206ENST00000358278 MDM1Q8TC05 714 aa14.65□□□□□ -0.06
TPM1-206ENST00000358278 ZUFSPQ96AP4 578 aa14.65□□□□□ -0.06
TPM1-206ENST00000358278 MOCOSQ96EN8 888 aa14.65□□□□□ -0.06
TPM1-206ENST00000358278 NOL11Q9H8H0 719 aaKnown RBP14.65□□□□□ -0.06
TPM1-206ENST00000358278 PDE7BQ9NP56 450 aa14.65□□□□□ -0.06
TPM1-206ENST00000358278 TMEM184CQ9NVA4 438 aa14.65□□□□□ -0.06
TPM1-206ENST00000358278 AKAP7Q9P0M2 348 aaPredicted RBP14.65□□□□□ -0.06
TPM1-206ENST00000358278 ANKMY1Q9P2S6 941 aa14.65□□□□□ -0.06
TPM1-206ENST00000358278 TMX2-CTNND1H3BSU7 103 aa14.64□□□□□ -0.07
TPM1-206ENST00000358278 JUPP14923 745 aa14.64□□□□□ -0.07
TPM1-206ENST00000358278 TSPAN8P19075 237 aa14.64□□□□□ -0.07
TPM1-206ENST00000358278 EPORP19235 508 aa14.64□□□□□ -0.07
TPM1-206ENST00000358278 CSTF2P33240 577 aaKnown RBP eCLIP14.64□□□□□ -0.07
TPM1-206ENST00000358278 GRK3P35626 688 aa14.64□□□□□ -0.07
TPM1-206ENST00000358278 NAA20P61599 178 aa14.64□□□□□ -0.07
TPM1-206ENST00000358278 IRF8Q02556 426 aa14.64□□□□□ -0.07
TPM1-206ENST00000358278 CHIT1Q13231 466 aa14.64□□□□□ -0.07
TPM1-206ENST00000358278 NXPE4Q6UWF7 544 aa14.64□□□□□ -0.07
TPM1-206ENST00000358278 FRMD7Q6ZUT3 714 aa14.64□□□□□ -0.07
TPM1-206ENST00000358278 ABHD11Q8NFV4 315 aa14.64□□□□□ -0.07
TPM1-206ENST00000358278 TRPC4APQ8TEL6 797 aa14.64□□□□□ -0.07
TPM1-206ENST00000358278 DYDC1Q8WWB3 177 aa14.64□□□□□ -0.07
TPM1-206ENST00000358278 ADAMTS14Q8WXS8 1223 aa14.64□□□□□ -0.07
TPM1-206ENST00000358278 TCTN2Q96GX1 697 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms