RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 SYT16Q17RD7 645 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 ZC3H12BQ5HYM0 836 aaKnown RBP9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 MPP7Q5T2T1 576 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 KRT73Q86Y46 540 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 ZNF280BQ86YH2 543 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 RDH10Q8IZV5 341 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 PELI3Q8N2H9 469 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 TTC16Q8NEE8 873 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 ITCHQ96J02 903 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 NT5C1AQ9BXI3 368 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 SLC19A3Q9BZV2 496 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 RACGAP1Q9H0H5 632 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 SMURF2Q9HAU4 748 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 IL1RL2Q9HB29 575 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 RGS18Q9NS28 235 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 KIF17Q9P2E2 1029 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 TRIOO75962 3097 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 SLC22A23A1A5C7 686 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 TRIM13O60858 407 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 BEST1O76090 585 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 FADS2O95864 444 aaKnown RBP9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 WDPCPO95876 746 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 LCKP06239 509 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 NCK1P16333 377 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 ZP3P21754 424 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 HLA-FP30511 346 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 AIF1P55008 147 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 PDK2Q15119 407 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 TOR1AIP1Q5JTV8 583 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 GPR158Q5T848 1215 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 GPR139Q6DWJ6 353 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 FAM45BPQ6NSW5 357 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 SUSD1Q6UWL2 747 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 FAM183BPQ6ZVS7 135 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 DBF4BQ8NFT6 615 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 OR7G3Q8NG95 312 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 NANPQ8TBE9 248 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 SETD6Q8TBK2 473 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 FAM45AQ8TCE6 357 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 TMEM209Q96SK2 561 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 APOL4Q9BPW4 351 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 TBCDQ9BTW9 1192 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 SLAMF7Q9NQ25 335 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 PRDM9Q9NQV7 894 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 KCMF1Q9P0J7 381 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 LIPT1Q9Y234 373 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 A3GALT2U3KPV4 340 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 SDHDO14521 159 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 PRMT5O14744 637 aaPredicted RBP9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 GATCO43716 136 aaKnown RBP9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 TBC1D4O60343 1298 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 LDOC1O95751 146 aaPredicted RBP9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 MT-ND2P03891 347 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 THP07101 528 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 LIPAP38571 399 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 NDUFV1P49821 464 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 PRPSAP1Q14558 356 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 SPANXN2Q5MJ10 180 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 ATRAIDQ6UW56 229 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 C5orf46Q6UWT4 87 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 RTN4RL1Q86UN2 441 aaPredicted RBP9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 ADHFE1Q8IWW8 467 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 TIGD4Q8IY51 512 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 EFHBQ8N7U6 833 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 ATG16L2Q8NAA4 619 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 GPR152Q8TDT2 470 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 SEPHS2Q99611 448 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 FEM1AQ9BSK4 669 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 MED10Q9BTT4 135 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 CCDC32Q9BV29 185 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 TTLL2Q9BWV7 592 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 ARNT2Q9HBZ2 717 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 C11orf16Q9NQ32 467 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 RAB6BQ9NRW1 208 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 ZNF275Q9NSD4 429 aaPredicted RBP9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 UBQLN1Q9UMX0 589 aaKnown RBP9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 INVSQ9Y283 1065 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 VPS9D1Q9Y2B5 631 aa9.06□□□□□ -0.96
SMARCAL1-202ENST00000358207 KIF26AQ9ULI4 1882 aaPredicted RBP9.05□□□□□ -0.96
SMARCAL1-202ENST00000358207 CLDN24A6NM45 220 aa9.05□□□□□ -0.96
SMARCAL1-202ENST00000358207 LOC730098B7Z3J9 87 aa9.05□□□□□ -0.96
SMARCAL1-202ENST00000358207 HS6ST1O60243 411 aa9.05□□□□□ -0.96
SMARCAL1-202ENST00000358207 DFNA5O60443 496 aa9.05□□□□□ -0.96
SMARCAL1-202ENST00000358207 HUS1O60921 280 aa9.05□□□□□ -0.96
SMARCAL1-202ENST00000358207 FCGR1AP12314 374 aa9.05□□□□□ -0.96
SMARCAL1-202ENST00000358207 SLC2A4P14672 509 aa9.05□□□□□ -0.96
SMARCAL1-202ENST00000358207 HK1P19367 917 aa9.05□□□□□ -0.96
SMARCAL1-202ENST00000358207 PSMA2P25787 234 aa9.05□□□□□ -0.96
SMARCAL1-202ENST00000358207 HLA-DMAP28067 261 aa9.05□□□□□ -0.96
SMARCAL1-202ENST00000358207 RPP38P78345 283 aaKnown RBP9.05□□□□□ -0.96
SMARCAL1-202ENST00000358207 FASTKQ14296 549 aaKnown RBP9.05□□□□□ -0.96
SMARCAL1-202ENST00000358207 TRIP4Q15650 581 aaPredicted RBP9.05□□□□□ -0.96
SMARCAL1-202ENST00000358207 ETFDHQ16134 617 aa9.05□□□□□ -0.96
SMARCAL1-202ENST00000358207 CLLU1Q5K131 121 aa9.05□□□□□ -0.96
SMARCAL1-202ENST00000358207 LIN9Q5TKA1 542 aa9.05□□□□□ -0.96
SMARCAL1-202ENST00000358207 SDHAF4Q5VUM1 108 aa9.05□□□□□ -0.96
SMARCAL1-202ENST00000358207 ZNF782Q6ZMW2 699 aaPredicted RBP9.05□□□□□ -0.96
SMARCAL1-202ENST00000358207 C17orf107Q6ZR85 190 aa9.05□□□□□ -0.96
SMARCAL1-202ENST00000358207 STK32CQ86UX6 486 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms