RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 ARHGAP22Q7Z5H3 698 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 C17orf64Q86WR6 236 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 SNX31Q8N9S9 440 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 SLC5A11Q8WWX8 675 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 L3HYPDHQ96EM0 354 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 PRAP1Q96NZ9 151 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 TRAPPC9Q96Q05 1148 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 DPH7Q9BTV6 452 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 NKIRAS1Q9NYS0 192 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 SEMA5BQ9P283 1151 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 PPP6CO00743 305 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 TRIM13O60858 407 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 CCNDBP1O95273 360 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 CDH1P12830 882 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 EPB42P16452 691 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 GNAZP19086 355 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 ABATP80404 500 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 HHATQ5VTY9 493 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 FCRL6Q6DN72 434 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 METTL2BQ6P1Q9 378 aaKnown RBP14.3□□□□□ -0.12
CCNE1-202ENST00000357943 ZCCHC23Q6ZST2 131 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 GOLGA7Q7Z5G4 137 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 TMPRSS11BQ86T26 416 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 CCNYL1Q8N7R7 359 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 ZNF768Q9H5H4 540 aaKnown RBP14.3□□□□□ -0.12
CCNE1-202ENST00000357943 NOL11Q9H8H0 719 aaKnown RBP14.3□□□□□ -0.12
CCNE1-202ENST00000357943 IPPKQ9H8X2 491 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 SEMA4BQ9NPR2 832 aaPredicted RBP14.3□□□□□ -0.12
CCNE1-202ENST00000357943 DYRK1BQ9Y463 629 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 ANGPTL3Q9Y5C1 460 aa14.3□□□□□ -0.12
CCNE1-202ENST00000357943 COL27A1Q8IZC6 1860 aaPredicted RBP14.29□□□□□ -0.12
CCNE1-202ENST00000357943 TOX3O15405 576 aaPredicted RBP14.29□□□□□ -0.12
CCNE1-202ENST00000357943 ZBTB11O95625 1053 aaPredicted RBP14.29□□□□□ -0.12
CCNE1-202ENST00000357943 ANKRD34CP0C6C1 535 aa14.29□□□□□ -0.12
CCNE1-202ENST00000357943 NR1D1P20393 614 aa14.29□□□□□ -0.12
CCNE1-202ENST00000357943 INHBCP55103 352 aa14.29□□□□□ -0.12
CCNE1-202ENST00000357943 CLCQ05315 142 aa14.29□□□□□ -0.12
CCNE1-202ENST00000357943 FIGLAQ6QHK4 219 aa14.29□□□□□ -0.12
CCNE1-202ENST00000357943 ADCK2Q7Z695 626 aa14.29□□□□□ -0.12
CCNE1-202ENST00000357943 NUDCD3Q8IVD9 361 aa14.29□□□□□ -0.12
CCNE1-202ENST00000357943 DCBLD1Q8N8Z6 715 aa14.29□□□□□ -0.12
CCNE1-202ENST00000357943 C19orf47Q8N9M1 422 aaKnown RBP14.29□□□□□ -0.12
CCNE1-202ENST00000357943 ABHD11Q8NFV4 315 aa14.29□□□□□ -0.12
CCNE1-202ENST00000357943 OR52B6Q8NGF0 335 aa14.29□□□□□ -0.12
CCNE1-202ENST00000357943 PPP4R1Q8TF05 950 aa14.29□□□□□ -0.12
CCNE1-202ENST00000357943 ZNF483Q8TF39 744 aaPredicted RBP14.29□□□□□ -0.12
CCNE1-202ENST00000357943 KLHL6Q8WZ60 621 aa14.29□□□□□ -0.12
CCNE1-202ENST00000357943 ZUFSPQ96AP4 578 aa14.29□□□□□ -0.12
CCNE1-202ENST00000357943 GATA5Q9BWX5 397 aaPredicted RBP14.29□□□□□ -0.12
CCNE1-202ENST00000357943 GSTO2Q9H4Y5 243 aa14.29□□□□□ -0.12
CCNE1-202ENST00000357943 FAM60AQ9NP50 221 aa14.29□□□□□ -0.12
CCNE1-202ENST00000357943 GPRC5BQ9NZH0 403 aa14.29□□□□□ -0.12
CCNE1-202ENST00000357943 CLCA2Q9UQC9 943 aa14.29□□□□□ -0.12
CCNE1-202ENST00000357943 KLK4Q9Y5K2 254 aa14.29□□□□□ -0.12
CCNE1-202ENST00000357943 A0A1B0GTL3 188 aa14.28□□□□□ -0.12
CCNE1-202ENST00000357943 OR7A17O14581 309 aa14.28□□□□□ -0.12
CCNE1-202ENST00000357943 POLR3GO15318 223 aaPredicted RBP14.28□□□□□ -0.12
CCNE1-202ENST00000357943 BIRC5O15392 142 aa14.28□□□□□ -0.12
CCNE1-202ENST00000357943 FKBP9O95302 570 aa14.28□□□□□ -0.12
CCNE1-202ENST00000357943 FGF3P11487 239 aaPredicted RBP14.28□□□□□ -0.12
CCNE1-202ENST00000357943 CHN1P15882 459 aa14.28□□□□□ -0.12
CCNE1-202ENST00000357943 VARSP26640 1264 aaKnown RBP14.28□□□□□ -0.12
CCNE1-202ENST00000357943 CCKBRP32239 447 aa14.28□□□□□ -0.12
CCNE1-202ENST00000357943 CCR10P46092 362 aa14.28□□□□□ -0.12
CCNE1-202ENST00000357943 CSNK1G2P78368 415 aa14.28□□□□□ -0.12
CCNE1-202ENST00000357943 MEF2AQ02078 507 aaPredicted RBP14.28□□□□□ -0.12
CCNE1-202ENST00000357943 KCNAB1Q14722 419 aa14.28□□□□□ -0.12
CCNE1-202ENST00000357943 C16orf72Q14CZ0 275 aa14.28□□□□□ -0.12
CCNE1-202ENST00000357943 ISXQ2M1V0 245 aa14.28□□□□□ -0.12
CCNE1-202ENST00000357943 ZNF425Q6IV72 752 aa14.28□□□□□ -0.12
CCNE1-202ENST00000357943 NXPE4Q6UWF7 544 aa14.28□□□□□ -0.12
CCNE1-202ENST00000357943 SLCO4C1Q6ZQN7 724 aa14.28□□□□□ -0.12
CCNE1-202ENST00000357943 PAQR7Q86WK9 346 aa14.28□□□□□ -0.12
CCNE1-202ENST00000357943 PLD3Q8IV08 490 aa14.28□□□□□ -0.12
CCNE1-202ENST00000357943 CARFQ8N187 725 aa14.28□□□□□ -0.12
CCNE1-202ENST00000357943 TRPC4APQ8TEL6 797 aa14.28□□□□□ -0.12
CCNE1-202ENST00000357943 ADAMTS14Q8WXS8 1223 aa14.28□□□□□ -0.12
CCNE1-202ENST00000357943 SLC41A2Q96JW4 573 aa14.28□□□□□ -0.12
CCNE1-202ENST00000357943 TMEM74Q96NL1 305 aa14.28□□□□□ -0.12
CCNE1-202ENST00000357943 FCRL4Q96PJ5 515 aa14.28□□□□□ -0.12
CCNE1-202ENST00000357943 CDK15Q96Q40 435 aa14.28□□□□□ -0.12
CCNE1-202ENST00000357943 PLCD4Q9BRC7 762 aa14.28□□□□□ -0.12
CCNE1-202ENST00000357943 SPNS1Q9H2V7 528 aa14.28□□□□□ -0.12
CCNE1-202ENST00000357943 SNRNP200O75643 2136 aaKnown RBP14.28□□□□□ -0.12
CCNE1-202ENST00000357943 OR2A25A4D2G3 310 aa14.27□□□□□ -0.12
CCNE1-202ENST00000357943 HCRTR1O43613 425 aa14.27□□□□□ -0.12
CCNE1-202ENST00000357943 CTSVO60911 334 aa14.27□□□□□ -0.12
CCNE1-202ENST00000357943 CSO75390 466 aaKnown RBP14.27□□□□□ -0.12
CCNE1-202ENST00000357943 KATNA1O75449 491 aa14.27□□□□□ -0.12
CCNE1-202ENST00000357943 NELFEP18615 380 aaKnown RBP14.27□□□□□ -0.12
CCNE1-202ENST00000357943 CD22P20273 847 aa14.27□□□□□ -0.12
CCNE1-202ENST00000357943 HOXD11P31277 338 aaPredicted RBP14.27□□□□□ -0.12
CCNE1-202ENST00000357943 PIK3CGP48736 1102 aa14.27□□□□□ -0.12
CCNE1-202ENST00000357943 CBX1P83916 185 aa14.27□□□□□ -0.12
CCNE1-202ENST00000357943 CHIT1Q13231 466 aa14.27□□□□□ -0.12
CCNE1-202ENST00000357943 TRA2AQ13595 282 aaKnown RBP eCLIP14.27□□□□□ -0.12
CCNE1-202ENST00000357943 PUM1Q14671 1186 aaKnown RBP eCLIP14.27□□□□□ -0.12
CCNE1-202ENST00000357943 PCM1Q15154 2024 aa14.27□□□□□ -0.12
CCNE1-202ENST00000357943 XKR6Q5GH73 641 aa14.27□□□□□ -0.12
CCNE1-202ENST00000357943 CFAP157Q5JU67 520 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms