RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 ZIC1Q15915 447 aa24.42■■□□□ 1.5
SSBP3-202ENST00000357475 RBBP7Q16576 425 aa24.42■■□□□ 1.5
SSBP3-202ENST00000357475 METTL2BQ6P1Q9 378 aaKnown RBP24.42■■□□□ 1.5
SSBP3-202ENST00000357475 SLCO4C1Q6ZQN7 724 aa24.42■■□□□ 1.5
SSBP3-202ENST00000357475 C17orf64Q86WR6 236 aa24.42■■□□□ 1.5
SSBP3-202ENST00000357475 ARFGAP2Q8N6H7 521 aa24.42■■□□□ 1.5
SSBP3-202ENST00000357475 PPP1R14CQ8TAE6 165 aa24.42■■□□□ 1.5
SSBP3-202ENST00000357475 PRAP1Q96NZ9 151 aa24.42■■□□□ 1.5
SSBP3-202ENST00000357475 GFM1Q96RP9 751 aaKnown RBP24.42■■□□□ 1.5
SSBP3-202ENST00000357475 DPH7Q9BTV6 452 aa24.42■■□□□ 1.5
SSBP3-202ENST00000357475 KCNE2Q9Y6J6 123 aa24.42■■□□□ 1.5
SSBP3-202ENST00000357475 A0A0J9YY10 115 aa24.41■■□□□ 1.5
SSBP3-202ENST00000357475 A8MU76 341 aa24.41■■□□□ 1.5
SSBP3-202ENST00000357475 KATNA1O75449 491 aa24.41■■□□□ 1.5
SSBP3-202ENST00000357475 SERPINE1P05121 402 aa24.41■■□□□ 1.5
SSBP3-202ENST00000357475 CDH3P22223 829 aa24.41■■□□□ 1.5
SSBP3-202ENST00000357475 CMPK1P30085 196 aa24.41■■□□□ 1.5
SSBP3-202ENST00000357475 BST1Q10588 318 aa24.41■■□□□ 1.5
SSBP3-202ENST00000357475 TRAF3Q13114 568 aa24.41■■□□□ 1.5
SSBP3-202ENST00000357475 FCRL6Q6DN72 434 aa24.41■■□□□ 1.5
SSBP3-202ENST00000357475 TMEM71Q6P5X7 295 aa24.41■■□□□ 1.5
SSBP3-202ENST00000357475 B3GNT8Q7Z7M8 397 aa24.41■■□□□ 1.5
SSBP3-202ENST00000357475 SYVN1Q86TM6 617 aa24.41■■□□□ 1.5
SSBP3-202ENST00000357475 PLXDC1Q8IUK5 500 aa24.41■■□□□ 1.5
SSBP3-202ENST00000357475 DYDC1Q8WWB3 177 aa24.41■■□□□ 1.5
SSBP3-202ENST00000357475 ZDHHC12Q96GR4 267 aa24.41■■□□□ 1.5
SSBP3-202ENST00000357475 SYNPO2LQ9H987 977 aa24.41■■□□□ 1.5
SSBP3-202ENST00000357475 SLC9B1P1A6NJY1 282 aa24.4■■□□□ 1.5
SSBP3-202ENST00000357475 D6RAR5 112 aa24.4■■□□□ 1.5
SSBP3-202ENST00000357475 AGRPO00253 132 aa24.4■■□□□ 1.5
SSBP3-202ENST00000357475 ZW10O43264 779 aa24.4■■□□□ 1.5
SSBP3-202ENST00000357475 CSRP1P21291 193 aaKnown RBP24.4■■□□□ 1.5
SSBP3-202ENST00000357475 PDX1P52945 283 aa24.4■■□□□ 1.5
SSBP3-202ENST00000357475 SH3BP2P78314 561 aa24.4■■□□□ 1.5
SSBP3-202ENST00000357475 INSM1Q01101 510 aaPredicted RBP24.4■■□□□ 1.5
SSBP3-202ENST00000357475 ASPHQ12797 758 aa24.4■■□□□ 1.5
SSBP3-202ENST00000357475 DOC2AQ14183 400 aa24.4■■□□□ 1.5
SSBP3-202ENST00000357475 RCN2Q14257 317 aa24.4■■□□□ 1.5
SSBP3-202ENST00000357475 ARL13AQ5H913 290 aaPredicted RBP24.4■■□□□ 1.5
SSBP3-202ENST00000357475 NXPE4Q6UWF7 544 aa24.4■■□□□ 1.5
SSBP3-202ENST00000357475 ZNF740Q8NDX6 193 aa24.4■■□□□ 1.5
SSBP3-202ENST00000357475 CKAP2Q8WWK9 683 aa24.4■■□□□ 1.5
SSBP3-202ENST00000357475 ZNF75CPQ92670 426 aaPredicted RBP24.4■■□□□ 1.5
SSBP3-202ENST00000357475 TRAPPC9Q96Q05 1148 aa24.4■■□□□ 1.5
SSBP3-202ENST00000357475 DRC3Q9H069 523 aa24.4■■□□□ 1.5
SSBP3-202ENST00000357475 MANSC1Q9H8J5 431 aa24.4■■□□□ 1.5
SSBP3-202ENST00000357475 GPRC5BQ9NZH0 403 aa24.4■■□□□ 1.5
SSBP3-202ENST00000357475 CDV3Q9UKY7 258 aaKnown RBP24.4■■□□□ 1.5
SSBP3-202ENST00000357475 RNF11Q9Y3C5 154 aa24.4■■□□□ 1.5
SSBP3-202ENST00000357475 MDC1Q14676 2089 aaKnown RBP24.4■■□□□ 1.5
SSBP3-202ENST00000357475 IGHV5-10-1A0A0J9YXX1 117 aa24.4■■□□□ 1.5
SSBP3-202ENST00000357475 NPHS1O60500 1241 aa24.4■■□□□ 1.5
SSBP3-202ENST00000357475 GNAZP19086 355 aa24.4■■□□□ 1.5
SSBP3-202ENST00000357475 ERVPABLB-1P60509 514 aa24.4■■□□□ 1.5
SSBP3-202ENST00000357475 CSNK1G2P78368 415 aa24.4■■□□□ 1.5
SSBP3-202ENST00000357475 LCP2Q13094 533 aa24.4■■□□□ 1.5
SSBP3-202ENST00000357475 CHIT1Q13231 466 aa24.4■■□□□ 1.5
SSBP3-202ENST00000357475 SPIDRQ14159 915 aa24.4■■□□□ 1.5
SSBP3-202ENST00000357475 RSPO4Q2I0M5 234 aaPredicted RBP24.4■■□□□ 1.5
SSBP3-202ENST00000357475 XKR6Q5GH73 641 aa24.4■■□□□ 1.5
SSBP3-202ENST00000357475 CACHD1Q5VU97 1274 aa24.4■■□□□ 1.5
SSBP3-202ENST00000357475 ZNF425Q6IV72 752 aa24.4■■□□□ 1.5
SSBP3-202ENST00000357475 LETMD1Q6P1Q0 360 aa24.4■■□□□ 1.5
SSBP3-202ENST00000357475 DHRS13Q6UX07 377 aa24.4■■□□□ 1.5
SSBP3-202ENST00000357475 PLD3Q8IV08 490 aa24.4■■□□□ 1.5
SSBP3-202ENST00000357475 CNDP1Q96KN2 507 aa24.4■■□□□ 1.5
SSBP3-202ENST00000357475 TLCD2A6NGC4 264 aa24.39■■□□□ 1.49
SSBP3-202ENST00000357475 CLGNO14967 610 aa24.39■■□□□ 1.49
SSBP3-202ENST00000357475 POLR3GO15318 223 aaPredicted RBP24.39■■□□□ 1.49
SSBP3-202ENST00000357475 RASSF9O75901 435 aa24.39■■□□□ 1.49
SSBP3-202ENST00000357475 WFS1O76024 890 aa24.39■■□□□ 1.49
SSBP3-202ENST00000357475 PIK3CGP48736 1102 aa24.39■■□□□ 1.49
SSBP3-202ENST00000357475 CCNG1P51959 295 aa24.39■■□□□ 1.49
SSBP3-202ENST00000357475 ABATP80404 500 aa24.39■■□□□ 1.49
SSBP3-202ENST00000357475 IRF8Q02556 426 aa24.39■■□□□ 1.49
SSBP3-202ENST00000357475 STX3Q13277 289 aa24.39■■□□□ 1.49
SSBP3-202ENST00000357475 ILKQ13418 452 aa24.39■■□□□ 1.49
SSBP3-202ENST00000357475 FIGLAQ6QHK4 219 aa24.39■■□□□ 1.49
SSBP3-202ENST00000357475 ADCK2Q7Z695 626 aa24.39■■□□□ 1.49
SSBP3-202ENST00000357475 PAQR7Q86WK9 346 aa24.39■■□□□ 1.49
SSBP3-202ENST00000357475 SLITRK4Q8IW52 837 aa24.39■■□□□ 1.49
SSBP3-202ENST00000357475 RCBTB1Q8NDN9 531 aa24.39■■□□□ 1.49
SSBP3-202ENST00000357475 ABHD11Q8NFV4 315 aa24.39■■□□□ 1.49
SSBP3-202ENST00000357475 OR4F6Q8NGB9 312 aa24.39■■□□□ 1.49
SSBP3-202ENST00000357475 OR4D9Q8NGE8 314 aa24.39■■□□□ 1.49
SSBP3-202ENST00000357475 AGAP11Q8TF27 550 aa24.39■■□□□ 1.49
SSBP3-202ENST00000357475 SREK1Q8WXA9 508 aaKnown RBP24.39■■□□□ 1.49
SSBP3-202ENST00000357475 ATP6V1E2Q96A05 226 aa24.39■■□□□ 1.49
SSBP3-202ENST00000357475 CCDC74BQ96LY2 380 aa24.39■■□□□ 1.49
SSBP3-202ENST00000357475 FCRL4Q96PJ5 515 aa24.39■■□□□ 1.49
SSBP3-202ENST00000357475 FAM60AQ9NP50 221 aa24.39■■□□□ 1.49
SSBP3-202ENST00000357475 C1GALT1Q9NS00 363 aa24.39■■□□□ 1.49
SSBP3-202ENST00000357475 FEZF1A0PJY2 475 aa24.38■■□□□ 1.49
SSBP3-202ENST00000357475 HAT1O14929 419 aa24.38■■□□□ 1.49
SSBP3-202ENST00000357475 OR4F21O95013 312 aa24.38■■□□□ 1.49
SSBP3-202ENST00000357475 CCNDBP1O95273 360 aa24.38■■□□□ 1.49
SSBP3-202ENST00000357475 FTH1P19P0C7X4 201 aa24.38■■□□□ 1.49
SSBP3-202ENST00000357475 C1GALT1C1LP0DN25 315 aa24.38■■□□□ 1.49
SSBP3-202ENST00000357475 THRAP10827 490 aa24.38■■□□□ 1.49
SSBP3-202ENST00000357475 ARL1P40616 181 aaPredicted RBP24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms