RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 FBXO8Q9NRD0 319 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 FBXL12Q9NXK8 326 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 REV1Q9UBZ9 1251 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 AP3M1Q9Y2T2 418 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 RAI2Q9Y5P3 530 aa9.13□□□□□ -0.95
SMG6-202ENST00000354901 MOXD2PA6NHM9 499 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 TRIM64BA6NI03 449 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 G3V2T6 193 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 PLD2O14939 933 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 INSIG1O15503 277 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 RHOCP08134 193 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 OGNP20774 298 aaKnown RBP9.12□□□□□ -0.95
SMG6-202ENST00000354901 GDF5P43026 501 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 YBEYP58557 167 aaPredicted RBP9.12□□□□□ -0.95
SMG6-202ENST00000354901 IL2P60568 153 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 GNA13Q14344 377 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 CLCA4Q14CN2 919 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 LRRC26Q2I0M4 334 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 RTP2Q5QGT7 225 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 C6orf136Q5SQH8 315 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 LETMD1Q6P1Q0 360 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 AFTPHQ6ULP2 937 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 KCTD20Q7Z5Y7 419 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 TMEM173Q86WV6 379 aaPredicted RBP9.12□□□□□ -0.95
SMG6-202ENST00000354901 RHEBL1Q8TAI7 183 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 FUBP3Q96I24 572 aaKnown RBP eCLIP9.12□□□□□ -0.95
SMG6-202ENST00000354901 METTL2AQ96IZ6 378 aaKnown RBP9.12□□□□□ -0.95
SMG6-202ENST00000354901 TBCDQ9BTW9 1192 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 TM6SF2Q9BZW4 377 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 DERL2Q9GZP9 239 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 ABCG8Q9H221 673 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 INTS10Q9NVR2 710 aaKnown RBP9.12□□□□□ -0.95
SMG6-202ENST00000354901 ABCD2Q9UBJ2 740 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 PCTPQ9UKL6 214 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 AGO1Q9UL18 857 aaKnown RBP9.12□□□□□ -0.95
SMG6-202ENST00000354901 SNX7Q9UNH6 387 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 PCDHB9Q9Y5E1 797 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 PCDHGB6Q9Y5F9 930 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 PCDHA9Q9Y5H5 950 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 MKI67P46013 3256 aaKnown RBP9.12□□□□□ -0.95
SMG6-202ENST00000354901 AQP12BA6NM10 295 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 DRGXA6NNA5 263 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 CTDSP2O14595 271 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 AREL1O15033 823 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 ADAMTS4O75173 837 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 WDR47O94967 919 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 PRAMEF12O95522 483 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 FHP07954 510 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 ALPIP09923 528 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 PRKAR2AP13861 404 aaKnown RBP9.12□□□□□ -0.95
SMG6-202ENST00000354901 HSD17B1P14061 328 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 LPOP22079 712 aaPredicted RBP9.12□□□□□ -0.95
SMG6-202ENST00000354901 MASP1P48740 699 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 ZNF140P52738 457 aaPredicted RBP9.12□□□□□ -0.95
SMG6-202ENST00000354901 ERVPABLB-1P60509 514 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 ACVR1Q04771 509 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 ATP6AP1LQ52LC2 224 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 RBM48Q5RL73 367 aaKnown RBP9.12□□□□□ -0.95
SMG6-202ENST00000354901 CLVS2Q5SYC1 327 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 ATXN7L2Q5T6C5 722 aaPredicted RBP9.12□□□□□ -0.95
SMG6-202ENST00000354901 TTC23Q5W5X9 447 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 PRMT9Q6P2P2 845 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 TAS1R1Q7RTX1 841 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 AQP12AQ8IXF9 295 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 CLDN19Q8N6F1 224 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 ZNF557Q8N988 423 aaPredicted RBP9.12□□□□□ -0.95
SMG6-202ENST00000354901 OR56A4Q8NGH8 313 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.12□□□□□ -0.95
SMG6-202ENST00000354901 ZNF599Q96NL3 588 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 ZFP14Q9HCL3 533 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 AIG1Q9NVV5 245 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 NLE1Q9NVX2 485 aaPredicted RBP9.12□□□□□ -0.95
SMG6-202ENST00000354901 FAM118AQ9NWS6 357 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 UTS2RQ9UKP6 389 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 POLR3HQ9Y535 204 aaPredicted RBP9.12□□□□□ -0.95
SMG6-202ENST00000354901 MEIOCA2RUB1 952 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 MYO1GB0I1T2 1018 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 GSTA4O15217 222 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 ADAM12O43184 909 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 BNIP3LO60238 219 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 G6PDP11413 515 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 CKBP12277 381 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 NAGAP17050 411 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 ALDH3A2P51648 485 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 PRMT2P55345 433 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 SP3Q02447 781 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 CHRNB3Q05901 458 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 DSC1Q08554 894 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 BTN1A1Q13410 526 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 GTF2H3Q13889 308 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 POU4F3Q15319 338 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 DUSP7Q16829 419 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 LCN8Q6JVE9 175 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 FAM126BQ8IXS8 530 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 UBQLNLQ8IYU4 475 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 SLAIN1Q8ND83 568 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 PIK3C3Q8NEB9 887 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 CLHC1Q8NHS4 586 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 ITFG1Q8TB96 612 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 EGFL8Q99944 293 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms