RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 GPR19Q15760 415 aa21.28■■□□□ 1
SHMT1-203ENST00000354098 CATSPEREQ5SY80 951 aa21.28■■□□□ 1
SHMT1-203ENST00000354098 ZNF425Q6IV72 752 aa21.28■■□□□ 1
SHMT1-203ENST00000354098 PMEPA1Q969W9 287 aa21.28■■□□□ 1
SHMT1-203ENST00000354098 FCRL4Q96PJ5 515 aa21.28■■□□□ 1
SHMT1-203ENST00000354098 PLCD4Q9BRC7 762 aa21.28■■□□□ 1
SHMT1-203ENST00000354098 APMAPQ9HDC9 416 aa21.28■■□□□ 1
SHMT1-203ENST00000354098 DNAJC11Q9NVH1 559 aa21.28■■□□□ 1
SHMT1-203ENST00000354098 SLC17A7Q9P2U7 560 aa21.28■■□□□ 1
SHMT1-203ENST00000354098 NEUROG3Q9Y4Z2 214 aa21.28■■□□□ 1
SHMT1-203ENST00000354098 ADAMTS20P59510 1910 aa21.28■■□□□ 1
SHMT1-203ENST00000354098 OR2A25A4D2G3 310 aa21.28■■□□□ 1
SHMT1-203ENST00000354098 GOLGA6L10A6NI86 522 aa21.28■■□□□ 1
SHMT1-203ENST00000354098 G3V2L1 256 aa21.28■■□□□ 1
SHMT1-203ENST00000354098 TYROBPO43914 113 aa21.28■■□□□ 1
SHMT1-203ENST00000354098 MAPK10P53779 464 aa21.28■■□□□ 1
SHMT1-203ENST00000354098 GABREP78334 506 aa21.28■■□□□ 1
SHMT1-203ENST00000354098 DEFB110Q30KQ9 67 aa21.28■■□□□ 1
SHMT1-203ENST00000354098 CCDC153Q494R4 210 aa21.28■■□□□ 1
SHMT1-203ENST00000354098 ADCK2Q7Z695 626 aa21.28■■□□□ 1
SHMT1-203ENST00000354098 PAQR7Q86WK9 346 aa21.28■■□□□ 1
SHMT1-203ENST00000354098 DNAJC22Q8N4W6 341 aa21.28■■□□□ 1
SHMT1-203ENST00000354098 TCP10LQ8TDR4 215 aa21.28■■□□□ 1
SHMT1-203ENST00000354098 SLC5A11Q8WWX8 675 aa21.28■■□□□ 1
SHMT1-203ENST00000354098 ARL8AQ96BM9 186 aa21.28■■□□□ 1
SHMT1-203ENST00000354098 OR6C1Q96RD1 312 aa21.28■■□□□ 1
SHMT1-203ENST00000354098 CTRCQ99895 268 aa21.28■■□□□ 1
SHMT1-203ENST00000354098 IQCGQ9H095 443 aaKnown RBP21.28■■□□□ 1
SHMT1-203ENST00000354098 POLR1BQ9H9Y6 1135 aa21.28■■□□□ 1
SHMT1-203ENST00000354098 ACSS2Q9NR19 701 aa21.28■■□□□ 1
SHMT1-203ENST00000354098 MSRB2Q9Y3D2 182 aa21.28■■□□□ 1
SHMT1-203ENST00000354098 DYRK1BQ9Y463 629 aa21.28■■□□□ 1
SHMT1-203ENST00000354098 KCNE2Q9Y6J6 123 aa21.28■■□□□ 1
SHMT1-203ENST00000354098 TRABD2BA6NFA1 517 aa21.27■■□□□ 1
SHMT1-203ENST00000354098 EPORP19235 508 aa21.27■■□□□ 1
SHMT1-203ENST00000354098 TAC1P20366 129 aa21.27■■□□□ 1
SHMT1-203ENST00000354098 EEF1DP29692 281 aaKnown RBP21.27■■□□□ 1
SHMT1-203ENST00000354098 GABRA4P48169 554 aa21.27■■□□□ 1
SHMT1-203ENST00000354098 MC2RQ01718 297 aa21.27■■□□□ 1
SHMT1-203ENST00000354098 CDC16Q13042 620 aa21.27■■□□□ 1
SHMT1-203ENST00000354098 PCBP2Q15366 365 aaKnown RBP eCLIP21.27■■□□□ 1
SHMT1-203ENST00000354098 FBXO42Q6P3S6 717 aa21.27■■□□□ 1
SHMT1-203ENST00000354098 ERMP1Q7Z2K6 904 aa21.27■■□□□ 1
SHMT1-203ENST00000354098 SNX31Q8N9S9 440 aa21.27■■□□□ 1
SHMT1-203ENST00000354098 MOCOSQ96EN8 888 aa21.27■■□□□ 1
SHMT1-203ENST00000354098 FAM111AQ96PZ2 611 aa21.27■■□□□ 1
SHMT1-203ENST00000354098 FGF21Q9NSA1 209 aa21.27■■□□□ 1
SHMT1-203ENST00000354098 OPTCQ9UBM4 332 aa21.27■■□□□ 1
SHMT1-203ENST00000354098 TMCO1Q9UM00 188 aa21.27■■□□□ 1
SHMT1-203ENST00000354098 SNX7Q9UNH6 387 aa21.27■■□□□ 1
SHMT1-203ENST00000354098 E7EQ34 232 aa21.26■□□□□ 0.99
SHMT1-203ENST00000354098 STX16-NPEPL1H3BU86 382 aa21.26■□□□□ 0.99
SHMT1-203ENST00000354098 K7EPI3 171 aa21.26■□□□□ 0.99
SHMT1-203ENST00000354098 STX16O14662 325 aa21.26■□□□□ 0.99
SHMT1-203ENST00000354098 MAP3K7O43318 606 aa21.26■□□□□ 0.99
SHMT1-203ENST00000354098 CTSBP07858 339 aa21.26■□□□□ 0.99
SHMT1-203ENST00000354098 CSNK1G2P78368 415 aa21.26■□□□□ 0.99
SHMT1-203ENST00000354098 MEF2AQ02078 507 aaPredicted RBP21.26■□□□□ 0.99
SHMT1-203ENST00000354098 TUBB3Q13509 450 aa21.26■□□□□ 0.99
SHMT1-203ENST00000354098 PDK4Q16654 411 aa21.26■□□□□ 0.99
SHMT1-203ENST00000354098 TMTC4Q5T4D3 741 aa21.26■□□□□ 0.99
SHMT1-203ENST00000354098 RPS27LQ71UM5 84 aaKnown RBP21.26■□□□□ 0.99
SHMT1-203ENST00000354098 LRRC70Q7Z2Q7 622 aa21.26■□□□□ 0.99
SHMT1-203ENST00000354098 PLD3Q8IV08 490 aa21.26■□□□□ 0.99
SHMT1-203ENST00000354098 TEX9Q8N6V9 391 aa21.26■□□□□ 0.99
SHMT1-203ENST00000354098 CCDC63Q8NA47 563 aa21.26■□□□□ 0.99
SHMT1-203ENST00000354098 ARMC2Q8NEN0 867 aa21.26■□□□□ 0.99
SHMT1-203ENST00000354098 NRSN2Q9GZP1 204 aa21.26■□□□□ 0.99
SHMT1-203ENST00000354098 CHRNA10Q9GZZ6 450 aa21.26■□□□□ 0.99
SHMT1-203ENST00000354098 SYNPO2LQ9H987 977 aa21.26■□□□□ 0.99
SHMT1-203ENST00000354098 TMEM184CQ9NVA4 438 aa21.26■□□□□ 0.99
SHMT1-203ENST00000354098 SLC39A1Q9NY26 324 aa21.26■□□□□ 0.99
SHMT1-203ENST00000354098 PILRAQ9UKJ1 303 aa21.26■□□□□ 0.99
SHMT1-203ENST00000354098 B4E171 279 aa21.25■□□□□ 0.99
SHMT1-203ENST00000354098 E2F3O00716 465 aa21.25■□□□□ 0.99
SHMT1-203ENST00000354098 HAT1O14929 419 aa21.25■□□□□ 0.99
SHMT1-203ENST00000354098 PRAMEF4O60810 478 aa21.25■□□□□ 0.99
SHMT1-203ENST00000354098 TNFSF15O95150 251 aa21.25■□□□□ 0.99
SHMT1-203ENST00000354098 ATP5F1P24539 256 aaPredicted RBP21.25■□□□□ 0.99
SHMT1-203ENST00000354098 TSPAN7P41732 249 aa21.25■□□□□ 0.99
SHMT1-203ENST00000354098 PRAMEF9Q5VWM5 478 aa21.25■□□□□ 0.99
SHMT1-203ENST00000354098 ZYG11AQ6WRX3 759 aa21.25■□□□□ 0.99
SHMT1-203ENST00000354098 TMPRSS11BQ86T26 416 aa21.25■□□□□ 0.99
SHMT1-203ENST00000354098 ABHD11Q8NFV4 315 aa21.25■□□□□ 0.99
SHMT1-203ENST00000354098 TLCD1Q96CP7 247 aa21.25■□□□□ 0.99
SHMT1-203ENST00000354098 ZNF501Q96CX3 271 aaPredicted RBP21.25■□□□□ 0.99
SHMT1-203ENST00000354098 RNF31Q96EP0 1072 aa21.25■□□□□ 0.99
SHMT1-203ENST00000354098 STMN4Q9H169 189 aaPredicted RBP21.25■□□□□ 0.99
SHMT1-203ENST00000354098 SPNS1Q9H2V7 528 aa21.25■□□□□ 0.99
SHMT1-203ENST00000354098 FBXO8Q9NRD0 319 aa21.25■□□□□ 0.99
SHMT1-203ENST00000354098 ANKMY1Q9P2S6 941 aa21.25■□□□□ 0.99
SHMT1-203ENST00000354098 PCDHGA8Q9Y5G5 932 aa21.25■□□□□ 0.99
SHMT1-203ENST00000354098 TNPO3Q9Y5L0 923 aaKnown RBP21.25■□□□□ 0.99
SHMT1-203ENST00000354098 ACTL7BQ9Y614 415 aa21.25■□□□□ 0.99
SHMT1-203ENST00000354098 AKAP13Q12802 2813 aa21.25■□□□□ 0.99
SHMT1-203ENST00000354098 A0A0J9YVX5 310 aa21.24■□□□□ 0.99
SHMT1-203ENST00000354098 MYL2P10916 166 aa21.24■□□□□ 0.99
SHMT1-203ENST00000354098 GNAZP19086 355 aa21.24■□□□□ 0.99
SHMT1-203ENST00000354098 MAGOHP61326 146 aaKnown RBP21.24■□□□□ 0.99
SHMT1-203ENST00000354098 NFKB2Q00653 900 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms