RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 ZNF805Q5CZA5 627 aa8.36□□□□□ -1.07
TRIM55-204ENST00000353317 ZNF648Q5T619 568 aaPredicted RBP8.36□□□□□ -1.07
TRIM55-204ENST00000353317 NIPAL1Q6NVV3 410 aa8.36□□□□□ -1.07
TRIM55-204ENST00000353317 CYP20A1Q6UW02 462 aa8.36□□□□□ -1.07
TRIM55-204ENST00000353317 IL27RAQ6UWB1 636 aa8.36□□□□□ -1.07
TRIM55-204ENST00000353317 SLC16A12Q6ZSM3 486 aa8.36□□□□□ -1.07
TRIM55-204ENST00000353317 PIWIL3Q7Z3Z3 882 aaKnown RBP8.36□□□□□ -1.07
TRIM55-204ENST00000353317 SERPINA9Q86WD7 417 aa8.36□□□□□ -1.07
TRIM55-204ENST00000353317 GPSM1Q86YR5 675 aa8.36□□□□□ -1.07
TRIM55-204ENST00000353317 YAF2Q8IY57 180 aa8.36□□□□□ -1.07
TRIM55-204ENST00000353317 ZNF557Q8N988 423 aaPredicted RBP8.36□□□□□ -1.07
TRIM55-204ENST00000353317 ABHD11Q8NFV4 315 aa8.36□□□□□ -1.07
TRIM55-204ENST00000353317 METTL6Q8TCB7 284 aa8.36□□□□□ -1.07
TRIM55-204ENST00000353317 CD200R1Q8TD46 325 aa8.36□□□□□ -1.07
TRIM55-204ENST00000353317 RIPOR3Q96MK2 946 aa8.36□□□□□ -1.07
TRIM55-204ENST00000353317 ZNF382Q96SR6 550 aa8.36□□□□□ -1.07
TRIM55-204ENST00000353317 OSBPL10Q9BXB5 764 aa8.36□□□□□ -1.07
TRIM55-204ENST00000353317 ASB8Q9H765 288 aa8.36□□□□□ -1.07
TRIM55-204ENST00000353317 PRSS16Q9NQE7 514 aa8.36□□□□□ -1.07
TRIM55-204ENST00000353317 CD274Q9NZQ7 290 aa8.36□□□□□ -1.07
TRIM55-204ENST00000353317 THAP10Q9P2Z0 257 aaPredicted RBP8.36□□□□□ -1.07
TRIM55-204ENST00000353317 WARS2Q9UGM6 360 aaKnown RBP8.36□□□□□ -1.07
TRIM55-204ENST00000353317 PDE10AQ9Y233 779 aa8.36□□□□□ -1.07
TRIM55-204ENST00000353317 ST14Q9Y5Y6 855 aa8.36□□□□□ -1.07
TRIM55-204ENST00000353317 MYO15AQ9UKN7 3530 aa8.36□□□□□ -1.07
TRIM55-204ENST00000353317 GON4LQ3T8J9 2241 aa8.36□□□□□ -1.07
TRIM55-204ENST00000353317 TSPAN11A1L157 253 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 AGAP14A8MT82 685 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 KPNA3O00505 521 aaPredicted RBP8.35□□□□□ -1.07
TRIM55-204ENST00000353317 DFNA5O60443 496 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 HPRP00739 348 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 CST1P01037 141 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 ASGR2P07307 311 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 FUT4P22083 530 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 CDH3P22223 829 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 NNMTP40261 264 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 KIR2DL1P43626 348 aaPredicted RBP8.35□□□□□ -1.07
TRIM55-204ENST00000353317 RECQLP46063 649 aaPredicted RBP8.35□□□□□ -1.07
TRIM55-204ENST00000353317 SPINT3P49223 89 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 SEC13P55735 322 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 CD300CQ08708 224 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 CD47Q08722 323 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 KCNAB2Q13303 367 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 PWP1Q13610 501 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 ITPRIPL2Q3MIP1 535 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 TTC23Q5W5X9 447 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 CRTC3Q6UUV7 619 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 SERPINA13PQ6UXR4 307 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 PRR23BQ6ZRT6 265 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 CPA6Q8N4T0 437 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 OR2T12Q8NG77 320 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 OR10A6Q8NH74 314 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 LINGO1Q96FE5 620 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 SH3YL1Q96HL8 342 aaPredicted RBP8.35□□□□□ -1.07
TRIM55-204ENST00000353317 IKZF5Q9H5V7 419 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 GORASP2Q9H8Y8 452 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 TMEM45AQ9NWC5 275 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 PAK1IP1Q9NWT1 392 aaPredicted RBP8.35□□□□□ -1.07
TRIM55-204ENST00000353317 LIMD1Q9UGP4 676 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 B3GNT3Q9Y2A9 372 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 GLYATL1P3A0A0U1RQE8 302 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 COQ9O75208 318 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 MTX2O75431 263 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 INMTO95050 263 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 EPHX1P07099 455 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 PKMP14618 531 aaKnown RBP8.35□□□□□ -1.07
TRIM55-204ENST00000353317 ITGB6P18564 788 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 RXRGP48443 463 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 IL2P60568 153 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 ISL1P61371 349 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 GSTM4Q03013 218 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 CACNG1Q06432 222 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 PTGR1Q14914 329 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 ABRAXAS2Q15018 415 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 KIAA0040Q15053 153 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 NR6A1Q15406 480 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 CTF1Q16619 201 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 AP5B1Q2VPB7 878 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 KIAA1211LQ6NV74 962 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 USP45Q70EL2 814 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 MMAAQ8IVH4 418 aaKnown RBP8.35□□□□□ -1.07
TRIM55-204ENST00000353317 PJA1Q8NG27 643 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 OR8J3Q8NGG0 315 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 SDCCAG3Q96C92 435 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 MAGED4Q96JG8 741 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 RDH12Q96NR8 316 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 CCDC115Q96NT0 180 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 ZNF347Q96SE7 839 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 WRAP53Q9BUR4 548 aaKnown RBP8.35□□□□□ -1.07
TRIM55-204ENST00000353317 UGT2B28Q9BY64 529 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 SLC6A17Q9H1V8 727 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 DNAJB9Q9UBS3 223 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 SERGEFQ9UGK8 458 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 ADGRE2Q9UHX3 823 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 TRMT6Q9UJA5 497 aaKnown RBP8.35□□□□□ -1.07
TRIM55-204ENST00000353317 BAG5Q9UL15 447 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 POLR3HQ9Y535 204 aaPredicted RBP8.35□□□□□ -1.07
TRIM55-204ENST00000353317 KNL1Q8NG31 2342 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 LAMA1P25391 3075 aa8.35□□□□□ -1.07
TRIM55-204ENST00000353317 FADS2P1A8MWK0 482 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms