RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 RETSATQ6NUM9 610 aa17.54■□□□□ 0.4
CTSB-202ENST00000353047 GHDCQ8N2G8 530 aa17.54■□□□□ 0.4
CTSB-202ENST00000353047 C1orf52Q8N6N3 182 aaKnown RBP17.54■□□□□ 0.4
CTSB-202ENST00000353047 TPT1P8Q9HAU6 139 aa17.54■□□□□ 0.4
CTSB-202ENST00000353047 DNAJC27Q9NZQ0 273 aa17.54■□□□□ 0.4
CTSB-202ENST00000353047 WBP11Q9Y2W2 641 aaKnown RBP17.54■□□□□ 0.4
CTSB-202ENST00000353047 SSC5DA1L4H1 1573 aa17.53■□□□□ 0.4
CTSB-202ENST00000353047 RBM47A0AV96 593 aaKnown RBP17.53■□□□□ 0.4
CTSB-202ENST00000353047 CENPXA8MT69 81 aa17.53■□□□□ 0.4
CTSB-202ENST00000353047 ACPPP15309 386 aa17.53■□□□□ 0.4
CTSB-202ENST00000353047 PTPN5P54829 565 aa17.53■□□□□ 0.4
CTSB-202ENST00000353047 PDZK1Q5T2W1 519 aa17.53■□□□□ 0.4
CTSB-202ENST00000353047 TRMT11Q7Z4G4 463 aaKnown RBP17.53■□□□□ 0.4
CTSB-202ENST00000353047 DDX53Q86TM3 631 aaKnown RBP17.53■□□□□ 0.4
CTSB-202ENST00000353047 CORO1BQ9BR76 489 aa17.53■□□□□ 0.4
CTSB-202ENST00000353047 ELOVL2Q9NXB9 296 aa17.53■□□□□ 0.4
CTSB-202ENST00000353047 LRRC37AA6NMS7 1700 aa17.53■□□□□ 0.4
CTSB-202ENST00000353047 ALOX5P09917 674 aa17.53■□□□□ 0.4
CTSB-202ENST00000353047 PREPP48147 710 aa17.53■□□□□ 0.4
CTSB-202ENST00000353047 TUBA3CQ13748 450 aa17.53■□□□□ 0.4
CTSB-202ENST00000353047 ZFP69Q49AA0 526 aa17.53■□□□□ 0.4
CTSB-202ENST00000353047 LSRQ86X29 649 aaPredicted RBP17.53■□□□□ 0.4
CTSB-202ENST00000353047 OR10G2Q8NGC3 310 aa17.53■□□□□ 0.4
CTSB-202ENST00000353047 PIH1D2Q8WWB5 315 aa17.53■□□□□ 0.4
CTSB-202ENST00000353047 TUBA1CQ9BQE3 449 aa17.53■□□□□ 0.4
CTSB-202ENST00000353047 CD244Q9BZW8 370 aa17.53■□□□□ 0.4
CTSB-202ENST00000353047 BRD9Q9H8M2 597 aa17.53■□□□□ 0.4
CTSB-202ENST00000353047 DHRS7Q9Y394 339 aa17.53■□□□□ 0.4
CTSB-202ENST00000353047 FAM227AF5H4B4 570 aa17.53■□□□□ 0.4
CTSB-202ENST00000353047 PRSS23O95084 383 aa17.53■□□□□ 0.4
CTSB-202ENST00000353047 PEX11BO96011 259 aa17.53■□□□□ 0.4
CTSB-202ENST00000353047 ZNF865P0CJ78 1059 aaPredicted RBP17.53■□□□□ 0.4
CTSB-202ENST00000353047 RFX3P48380 749 aa17.53■□□□□ 0.4
CTSB-202ENST00000353047 DAPP51397 102 aa17.53■□□□□ 0.4
CTSB-202ENST00000353047 OR2B6P58173 313 aa17.53■□□□□ 0.4
CTSB-202ENST00000353047 PHC1P78364 1004 aa17.53■□□□□ 0.4
CTSB-202ENST00000353047 LGI4Q8N135 537 aa17.53■□□□□ 0.4
CTSB-202ENST00000353047 DBF4BQ8NFT6 615 aa17.53■□□□□ 0.4
CTSB-202ENST00000353047 GTF3C2Q8WUA4 911 aaPredicted RBP17.53■□□□□ 0.4
CTSB-202ENST00000353047 PHF21AQ96BD5 680 aa17.53■□□□□ 0.4
CTSB-202ENST00000353047 MCMBPQ9BTE3 642 aa17.53■□□□□ 0.4
CTSB-202ENST00000353047 ARID1AO14497 2285 aa17.53■□□□□ 0.4
CTSB-202ENST00000353047 DOCK3Q8IZD9 2030 aa17.53■□□□□ 0.4
CTSB-202ENST00000353047 LAMP1P11279 417 aa17.52■□□□□ 0.4
CTSB-202ENST00000353047 MAPK1P28482 360 aa17.52■□□□□ 0.4
CTSB-202ENST00000353047 CD40LGP29965 261 aa17.52■□□□□ 0.4
CTSB-202ENST00000353047 PCBP2Q15366 365 aaKnown RBP eCLIP17.52■□□□□ 0.43e-22■■■□□ 17.9
CTSB-202ENST00000353047 KIAA1614Q5VZ46 1190 aa17.52■□□□□ 0.4
CTSB-202ENST00000353047 FAM131AQ6UXB0 335 aa17.52■□□□□ 0.4
CTSB-202ENST00000353047 TMCO2Q7Z6W1 182 aaPredicted RBP17.52■□□□□ 0.4
CTSB-202ENST00000353047 TP53INP1Q96A56 240 aa17.52■□□□□ 0.4
CTSB-202ENST00000353047 ACPTQ9BZG2 426 aa17.52■□□□□ 0.4
CTSB-202ENST00000353047 TP63Q9H3D4 680 aaPredicted RBP17.52■□□□□ 0.4
CTSB-202ENST00000353047 C8orf4Q9NR00 106 aa17.52■□□□□ 0.4
CTSB-202ENST00000353047 PCDHB8Q9UN66 801 aa17.52■□□□□ 0.4
CTSB-202ENST00000353047 PCDHGA10Q9Y5H3 936 aa17.52■□□□□ 0.4
CTSB-202ENST00000353047 SLC38A8A6NNN8 435 aa17.52■□□□□ 0.4
CTSB-202ENST00000353047 DNAJA1P31689 397 aaKnown RBP17.52■□□□□ 0.4
CTSB-202ENST00000353047 KDELR2P33947 212 aa17.52■□□□□ 0.4
CTSB-202ENST00000353047 ISL1P61371 349 aa17.52■□□□□ 0.4
CTSB-202ENST00000353047 NPRL3Q12980 569 aa17.52■□□□□ 0.4
CTSB-202ENST00000353047 SLC14A1Q13336 389 aa17.52■□□□□ 0.4
CTSB-202ENST00000353047 DPY19L1Q2PZI1 675 aa17.52■□□□□ 0.4
CTSB-202ENST00000353047 RTP2Q5QGT7 225 aa17.52■□□□□ 0.4
CTSB-202ENST00000353047 SERPINA13PQ6UXR4 307 aa17.52■□□□□ 0.4
CTSB-202ENST00000353047 ITPAQ9BY32 194 aa17.52■□□□□ 0.4
CTSB-202ENST00000353047 MTMR11A4FU01 709 aa17.52■□□□□ 0.39
CTSB-202ENST00000353047 ADAM12O43184 909 aa17.52■□□□□ 0.39
CTSB-202ENST00000353047 OR56A5P0C7T3 313 aa17.52■□□□□ 0.39
CTSB-202ENST00000353047 ZNF140P52738 457 aaPredicted RBP17.52■□□□□ 0.39
CTSB-202ENST00000353047 IFITM3Q01628 133 aa17.52■□□□□ 0.39
CTSB-202ENST00000353047 MYDGFQ969H8 173 aa17.52■□□□□ 0.39
CTSB-202ENST00000353047 TMEM159Q96B96 161 aa17.52■□□□□ 0.39
CTSB-202ENST00000353047 TRNT1Q96Q11 434 aaKnown RBP17.52■□□□□ 0.39
CTSB-202ENST00000353047 MS4A12Q9NXJ0 267 aa17.52■□□□□ 0.39
CTSB-202ENST00000353047 ZNF221Q9UK13 617 aa17.52■□□□□ 0.39
CTSB-202ENST00000353047 TMCC3Q9ULS5 477 aa17.52■□□□□ 0.39
CTSB-202ENST00000353047 WNK3Q9BYP7 1800 aa17.52■□□□□ 0.39
CTSB-202ENST00000353047 ZNF638Q14966 1978 aaKnown RBP17.52■□□□□ 0.39
CTSB-202ENST00000353047 QSER1Q2KHR3 1735 aa17.52■□□□□ 0.39
CTSB-202ENST00000353047 A0A1B0GVM2 712 aa17.51■□□□□ 0.39
CTSB-202ENST00000353047 CCRL2O00421 344 aa17.51■□□□□ 0.39
CTSB-202ENST00000353047 LIPAP38571 399 aa17.51■□□□□ 0.39
CTSB-202ENST00000353047 PSMD8P48556 350 aa17.51■□□□□ 0.39
CTSB-202ENST00000353047 MAPKAPK2P49137 400 aa17.51■□□□□ 0.39
CTSB-202ENST00000353047 TIAL1Q01085 375 aaKnown RBP eCLIP17.51■□□□□ 0.393e-20■□□□□ 9.6
CTSB-202ENST00000353047 MVKQ03426 396 aa17.51■□□□□ 0.39
CTSB-202ENST00000353047 ELP6Q0PNE2 266 aa17.51■□□□□ 0.39
CTSB-202ENST00000353047 PYDC2Q56P42 97 aa17.51■□□□□ 0.39
CTSB-202ENST00000353047 RRM2BQ7LG56 351 aa17.51■□□□□ 0.39
CTSB-202ENST00000353047 C1GALT1C1Q96EU7 318 aa17.51■□□□□ 0.39
CTSB-202ENST00000353047 ACTL8Q9H568 366 aa17.51■□□□□ 0.39
CTSB-202ENST00000353047 NEK6Q9HC98 313 aa17.51■□□□□ 0.39
CTSB-202ENST00000353047 GSAPA4D1B5 854 aa17.51■□□□□ 0.39
CTSB-202ENST00000353047 TNFRSF10BO14763 440 aa17.51■□□□□ 0.39
CTSB-202ENST00000353047 CDH4P55283 916 aa17.51■□□□□ 0.39
CTSB-202ENST00000353047 FUT10Q6P4F1 479 aa17.51■□□□□ 0.39
CTSB-202ENST00000353047 CCDC80Q76M96 950 aa17.51■□□□□ 0.39
CTSB-202ENST00000353047 KATNBL1Q9H079 304 aa17.51■□□□□ 0.39
CTSB-202ENST00000353047 DCAF13Q9NV06 445 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms