RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 CSRP3P50461 194 aa21.16■□□□□ 0.98
SNX3-202ENST00000349379 RAB10P61026 200 aa21.16■□□□□ 0.98
SNX3-202ENST00000349379 CDKL1Q00532 357 aa21.16■□□□□ 0.98
SNX3-202ENST00000349379 NAE1Q13564 534 aa21.16■□□□□ 0.98
SNX3-202ENST00000349379 FRMPD2BQ6IN97 320 aa21.16■□□□□ 0.98
SNX3-202ENST00000349379 LCTLQ6UWM7 567 aa21.16■□□□□ 0.98
SNX3-202ENST00000349379 ADAMTSL2Q86TH1 951 aa21.16■□□□□ 0.98
SNX3-202ENST00000349379 UBXN10Q96LJ8 280 aa21.16■□□□□ 0.98
SNX3-202ENST00000349379 RUFY1Q96T51 708 aa21.16■□□□□ 0.98
SNX3-202ENST00000349379 ZFYVE21Q9BQ24 234 aa21.16■□□□□ 0.98
SNX3-202ENST00000349379 SELENOSQ9BQE4 189 aa21.16■□□□□ 0.98
SNX3-202ENST00000349379 SYNPO2LQ9H987 977 aa21.16■□□□□ 0.98
SNX3-202ENST00000349379 CUEDC1Q9NWM3 386 aaPredicted RBP21.16■□□□□ 0.98
SNX3-202ENST00000349379 OARD1Q9Y530 152 aa21.16■□□□□ 0.98
SNX3-202ENST00000349379 A0A0J9YVX5 310 aa21.15■□□□□ 0.98
SNX3-202ENST00000349379 HMX2A2RU54 273 aa21.15■□□□□ 0.98
SNX3-202ENST00000349379 ERVH48-1M5A8F1 160 aa21.15■□□□□ 0.98
SNX3-202ENST00000349379 NKX2-8O15522 239 aa21.15■□□□□ 0.98
SNX3-202ENST00000349379 ITGB2P05107 769 aa21.15■□□□□ 0.98
SNX3-202ENST00000349379 RAB40ALP0C0E4 278 aa21.15■□□□□ 0.98
SNX3-202ENST00000349379 RHOXF2BP0C7M4 288 aa21.15■□□□□ 0.98
SNX3-202ENST00000349379 CYP4F2P78329 520 aa21.15■□□□□ 0.98
SNX3-202ENST00000349379 MC1RQ01726 317 aa21.15■□□□□ 0.98
SNX3-202ENST00000349379 TSNQ15631 228 aaKnown RBP21.15■□□□□ 0.98
SNX3-202ENST00000349379 PTCHD3Q3KNS1 767 aa21.15■□□□□ 0.98
SNX3-202ENST00000349379 THEMIS2Q5TEJ8 643 aa21.15■□□□□ 0.98
SNX3-202ENST00000349379 YOD1Q5VVQ6 348 aaPredicted RBP21.15■□□□□ 0.98
SNX3-202ENST00000349379 ATL1Q8WXF7 558 aa21.15■□□□□ 0.98
SNX3-202ENST00000349379 BBC3Q96PG8 261 aaPredicted RBP21.15■□□□□ 0.98
SNX3-202ENST00000349379 RHOXF2Q9BQY4 288 aa21.15■□□□□ 0.98
SNX3-202ENST00000349379 SLC7A5P2Q9GIP4 190 aa21.15■□□□□ 0.98
SNX3-202ENST00000349379 UTP6Q9NYH9 597 aaKnown RBP21.15■□□□□ 0.98
SNX3-202ENST00000349379 CTNNAL1Q9UBT7 734 aa21.15■□□□□ 0.98
SNX3-202ENST00000349379 SNX7Q9UNH6 387 aa21.15■□□□□ 0.98
SNX3-202ENST00000349379 SH2B3Q9UQQ2 575 aa21.15■□□□□ 0.98
SNX3-202ENST00000349379 BAHCC1Q9P281 2608 aa21.14■□□□□ 0.98
SNX3-202ENST00000349379 NUP210LQ5VU65 1888 aa21.14■□□□□ 0.97
SNX3-202ENST00000349379 LOC105369274A0A096LPK9 316 aa21.14■□□□□ 0.97
SNX3-202ENST00000349379 LOC102723532A0A0G2JNH3 316 aa21.14■□□□□ 0.97
SNX3-202ENST00000349379 ZNF500O60304 480 aaPredicted RBP21.14■□□□□ 0.97
SNX3-202ENST00000349379 ACSL3O95573 720 aa21.14■□□□□ 0.97
SNX3-202ENST00000349379 SLC35E2BP0CK96 405 aa21.14■□□□□ 0.97
SNX3-202ENST00000349379 CCDC166P0CW27 439 aa21.14■□□□□ 0.97
SNX3-202ENST00000349379 EZRP15311 586 aaKnown RBP21.14■□□□□ 0.97
SNX3-202ENST00000349379 CD1DP15813 335 aa21.14■□□□□ 0.97
SNX3-202ENST00000349379 HRH2P25021 359 aa21.14■□□□□ 0.97
SNX3-202ENST00000349379 PTPN4P29074 926 aa21.14■□□□□ 0.97
SNX3-202ENST00000349379 ARSFP54793 590 aa21.14■□□□□ 0.97
SNX3-202ENST00000349379 VSX2P58304 361 aaPredicted RBP21.14■□□□□ 0.97
SNX3-202ENST00000349379 CDC20Q12834 499 aa21.14■□□□□ 0.97
SNX3-202ENST00000349379 GRM7Q14831 915 aa21.14■□□□□ 0.97
SNX3-202ENST00000349379 SLMAPQ14BN4 828 aa21.14■□□□□ 0.97
SNX3-202ENST00000349379 CAPN13Q6MZZ7 669 aaPredicted RBP21.14■□□□□ 0.97
SNX3-202ENST00000349379 CMC1Q7Z7K0 106 aa21.14■□□□□ 0.97
SNX3-202ENST00000349379 OR4N4Q8N0Y3 316 aa21.14■□□□□ 0.97
SNX3-202ENST00000349379 MED8Q96G25 268 aa21.14■□□□□ 0.97
SNX3-202ENST00000349379 WBP1Q96G27 269 aa21.14■□□□□ 0.97
SNX3-202ENST00000349379 OR2A5Q96R48 311 aa21.14■□□□□ 0.97
SNX3-202ENST00000349379 NDC1Q9BTX1 674 aa21.14■□□□□ 0.97
SNX3-202ENST00000349379 NLNQ9BYT8 704 aa21.14■□□□□ 0.97
SNX3-202ENST00000349379 ABCF3Q9NUQ8 709 aa21.14■□□□□ 0.97
SNX3-202ENST00000349379 TMEM184CQ9NVA4 438 aa21.14■□□□□ 0.97
SNX3-202ENST00000349379 DHCR7Q9UBM7 475 aaKnown RBP21.14■□□□□ 0.97
SNX3-202ENST00000349379 PABPN1LA6NDY0 278 aaKnown RBP21.13■□□□□ 0.97
SNX3-202ENST00000349379 ATXN7O15265 892 aaPredicted RBP21.13■□□□□ 0.97
SNX3-202ENST00000349379 CREG1O75629 220 aa21.13■□□□□ 0.97
SNX3-202ENST00000349379 GUCA1CO95843 209 aa21.13■□□□□ 0.97
SNX3-202ENST00000349379 ONECUT2O95948 504 aa21.13■□□□□ 0.97
SNX3-202ENST00000349379 NPPBP16860 134 aa21.13■□□□□ 0.97
SNX3-202ENST00000349379 ATP6V0D1P61421 351 aa21.13■□□□□ 0.97
SNX3-202ENST00000349379 PRTGQ2VWP7 1150 aa21.13■□□□□ 0.97
SNX3-202ENST00000349379 WASHC2DQ5SRD0 308 aa21.13■□□□□ 0.97
SNX3-202ENST00000349379 LSM14AQ8ND56 463 aaKnown RBP21.13■□□□□ 0.97
SNX3-202ENST00000349379 SLC44A1Q8WWI5 657 aa21.13■□□□□ 0.97
SNX3-202ENST00000349379 PYCR2Q96C36 320 aa21.13■□□□□ 0.97
SNX3-202ENST00000349379 OR4K3Q96R72 315 aa21.13■□□□□ 0.97
SNX3-202ENST00000349379 ACTL8Q9H568 366 aa21.13■□□□□ 0.97
SNX3-202ENST00000349379 IRAK4Q9NWZ3 460 aa21.13■□□□□ 0.97
SNX3-202ENST00000349379 FARSAQ9Y285 508 aaKnown RBP21.13■□□□□ 0.97
SNX3-202ENST00000349379 ATMQ13315 3056 aa21.13■□□□□ 0.97
SNX3-202ENST00000349379 H0YGG7 62 aa21.12■□□□□ 0.97
SNX3-202ENST00000349379 H7BY64 318 aa21.12■□□□□ 0.97
SNX3-202ENST00000349379 KATNA1O75449 491 aa21.12■□□□□ 0.97
SNX3-202ENST00000349379 ANXA5P08758 320 aa21.12■□□□□ 0.97
SNX3-202ENST00000349379 ITGAXP20702 1163 aa21.12■□□□□ 0.97
SNX3-202ENST00000349379 AGXTP21549 392 aa21.12■□□□□ 0.97
SNX3-202ENST00000349379 CRABP2P29373 138 aa21.12■□□□□ 0.97
SNX3-202ENST00000349379 ARF3P61204 181 aaPredicted RBP21.12■□□□□ 0.97
SNX3-202ENST00000349379 RPS15P62841 145 aaKnown RBP21.12■□□□□ 0.97
SNX3-202ENST00000349379 NCF4Q15080 339 aa21.12■□□□□ 0.97
SNX3-202ENST00000349379 LINC00303Q3SY05 128 aa21.12■□□□□ 0.97
SNX3-202ENST00000349379 SOWAHCQ53LP3 525 aaPredicted RBP21.12■□□□□ 0.97
SNX3-202ENST00000349379 SYVN1Q86TM6 617 aa21.12■□□□□ 0.97
SNX3-202ENST00000349379 C17orf64Q86WR6 236 aa21.12■□□□□ 0.97
SNX3-202ENST00000349379 KLHDC8AQ8IYD2 350 aa21.12■□□□□ 0.97
SNX3-202ENST00000349379 SPATA6LQ8N4H0 392 aa21.12■□□□□ 0.97
SNX3-202ENST00000349379 EIF1ADQ8N9N8 165 aaKnown RBP21.12■□□□□ 0.97
SNX3-202ENST00000349379 TTC29Q8NA56 475 aaPredicted RBP21.12■□□□□ 0.97
SNX3-202ENST00000349379 PTERQ96BW5 349 aa21.12■□□□□ 0.97
SNX3-202ENST00000349379 PRAP1Q96NZ9 151 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms