RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 OR7A10O76100 309 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 ARHGEF15O94989 841 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 ENPP1P22413 925 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 CBLP22681 906 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 CHMP24386 653 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 EPHA2P29317 976 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 SLC9A3P48764 834 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 PXNP49023 591 aaPredicted RBP10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 IL10RBQ08334 325 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 RBBP7Q16576 425 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 NOMO2Q5JPE7 1267 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 ZNF367Q7RTV3 350 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 AMIGO1Q86WK6 493 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 YIPF7Q8N8F6 280 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 PNPLA1Q8N8W4 532 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 DNAJB8Q8NHS0 232 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 GGHQ92820 318 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 RNF31Q96EP0 1072 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 ZNF382Q96SR6 550 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 ZBTB18Q99592 522 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 RTP3Q9BQQ7 232 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 TINF2Q9BSI4 451 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 TBCDQ9BTW9 1192 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 GABARAPL3Q9BY60 117 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 ZYG11BQ9C0D3 744 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 TMEM245Q9H330 911 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 FAM83DQ9H4H8 585 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 SP110Q9HB58 689 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 IL1RAPQ9NPH3 570 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 SPASTQ9UBP0 616 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 TEKT2Q9UIF3 430 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 VPS4AQ9UN37 437 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 SAMD4AQ9UPU9 718 aaKnown RBP10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 CRYL1Q9Y2S2 319 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 PCDHGA6Q9Y5G7 932 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 NLRC5Q86WI3 1866 aa10.04□□□□□ -0.8
CHRNA1-202ENST00000348749 IGLV3-10A0A075B6K4 115 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 SLC12A8A0AV02 714 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 NT5C1B-RDH14C9J2C7 533 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 VPS26AO75436 327 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 OR2B3O76000 313 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 PDGFAP04085 211 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 CPN2P22792 545 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 PSEN2P49810 448 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 GRB14Q14449 540 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 MAPKAPK3Q16644 382 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 BTBD16Q32M84 506 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 FAM214AQ32MH5 1076 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 HABP4Q5JVS0 413 aaKnown RBP10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 SLC35F1Q5T1Q4 408 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 SDE2Q6IQ49 451 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 TMPRSS11AQ6ZMR5 421 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 RNF165Q6ZSG1 346 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 KRT73Q86Y46 540 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 ZNF683Q8IZ20 524 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 OR4L1Q8NH43 312 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 LHFPL5Q8TAF8 219 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 C9orf43Q8TAL5 461 aaPredicted RBP10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 ARRDC2Q8TBH0 407 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 ZFP42Q96MM3 310 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 KATNAL1Q9BW62 490 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 KCNN2Q9H2S1 579 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 AGO3Q9H9G7 860 aaKnown RBP10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 LIN7BQ9HAP6 207 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 NDFIP2Q9NV92 336 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 PDP1Q9P0J1 537 aaPredicted RBP10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 KIF17Q9P2E2 1029 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 STOML2Q9UJZ1 356 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 ABCG2Q9UNQ0 655 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 M0QZQ0 153 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 AOC2O75106 756 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 ERN1O75460 977 aaKnown RBP10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 OR4F21O95013 312 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 PTHP01270 115 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 SEMG1P04279 462 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 MSL3P1P0C860 447 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 PCSK2P16519 638 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 HOXC8P31273 242 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 RABGGTBP53611 331 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 MAPK12P53778 367 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 YBEYP58557 167 aaPredicted RBP10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 POU6F2P78424 691 aaPredicted RBP10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 PLIN5Q00G26 463 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 ITKQ08881 620 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 CAMK2GQ13555 558 aaPredicted RBP10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 GTF2H3Q13889 308 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 LAPTM4AQ15012 233 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 UPP1Q16831 310 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 GNASQ5JWF2 1037 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 PXDC1Q5TGL8 231 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 ALG1LQ6GMV1 187 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 HDDC2Q7Z4H3 204 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 KDELC2Q7Z4H8 507 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 CTU1Q7Z7A3 348 aaKnown RBP10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 ZSWIM9Q86XI8 627 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 THEM5Q8N1Q8 247 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 PGBD5Q8N414 524 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 FUBP1Q96AE4 644 aaKnown RBP10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 COQ8BQ96D53 544 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 TBATAQ96M53 351 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms