RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 FSHRP23945 695 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 SKP1P63208 163 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 LARS2Q15031 903 aaKnown RBP11.8□□□□□ -0.52
COL12A1-202ENST00000345356 ZNF678Q5SXM1 525 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 NOL9Q5SY16 702 aaKnown RBP11.8□□□□□ -0.52
COL12A1-202ENST00000345356 C10orf62Q5T681 223 aaPredicted RBP11.8□□□□□ -0.52
COL12A1-202ENST00000345356 ABHD15Q6UXT9 468 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 QSOX2Q6ZRP7 698 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 TPGS1Q6ZTW0 290 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 DNAJB7Q7Z6W7 309 aaPredicted RBP11.8□□□□□ -0.52
COL12A1-202ENST00000345356 UBQLNLQ8IYU4 475 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 TMEM151AQ8N4L1 468 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 SAMD12Q8N8I0 201 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 FAM110BQ8TC76 370 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 BRSK1Q8TDC3 778 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 NKD1Q969G9 470 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 TMEM168Q9H0V1 697 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 EXO5Q9H790 373 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 LRRN3E7EW58 273 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 MEN1O00255 615 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 PTPRAP18433 802 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 TMED4Q7Z7H5 227 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 ASB15Q8WXK1 588 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 ZNF354BQ96LW1 612 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 ABCG5Q9H222 651 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 LRRN3Q9H3W5 708 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 TRBC2A0A5B9 178 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 FFAR2O15552 330 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 RLN2P04090 185 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 RPL10P27635 214 aaKnown RBP11.8□□□□□ -0.52
COL12A1-202ENST00000345356 GRK5P34947 590 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 PTGR1Q14914 329 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 NBPF12Q5TAG4 269 aaPredicted RBP11.8□□□□□ -0.52
COL12A1-202ENST00000345356 LCN8Q6JVE9 175 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 MINDY1Q8N5J2 469 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 DDX1Q92499 740 aaKnown RBP11.8□□□□□ -0.52
COL12A1-202ENST00000345356 NCSTNQ92542 709 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 RNF121Q9H920 327 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 FAM105AQ9NUU6 356 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 MEMO1Q9Y316 297 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 OR10H1Q9Y4A9 318 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 ZNF451Q9Y4E5 1061 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 PCDHGA4Q9Y5G9 962 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 ARVCFO00192 962 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 ICMTO60725 284 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 RAB36O95755 333 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 ALDH2P05091 517 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 HTR2AP28223 471 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 NDUFV1P49821 464 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 ZMYND11Q15326 602 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 MED27Q6P2C8 311 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 HACD2Q6Y1H2 254 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 HMCESQ96FZ2 354 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 MEAF6Q9HAF1 191 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 TMEM27Q9HBJ8 222 aa11.8□□□□□ -0.52
COL12A1-202ENST00000345356 GBA2Q9HCG7 927 aaPredicted RBP11.8□□□□□ -0.52
COL12A1-202ENST00000345356 PTPRJQ12913 1337 aa11.79□□□□□ -0.52
COL12A1-202ENST00000345356 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.79□□□□□ -0.52
COL12A1-202ENST00000345356 TBL1XO60907 577 aa11.79□□□□□ -0.52
COL12A1-202ENST00000345356 H1F0P07305 194 aaKnown RBP11.79□□□□□ -0.52
COL12A1-202ENST00000345356 CBX5P45973 191 aa11.79□□□□□ -0.52
COL12A1-202ENST00000345356 SMSP52788 366 aa11.79□□□□□ -0.52
COL12A1-202ENST00000345356 DUOXA1Q1HG43 343 aa11.79□□□□□ -0.52
COL12A1-202ENST00000345356 C22orf42Q6IC83 251 aa11.79□□□□□ -0.52
COL12A1-202ENST00000345356 PGBD3Q8N328 593 aa11.79□□□□□ -0.52
COL12A1-202ENST00000345356 TCEANCQ8N8B7 351 aa11.79□□□□□ -0.52
COL12A1-202ENST00000345356 Q8N9G6 341 aaPredicted RBP11.79□□□□□ -0.52
COL12A1-202ENST00000345356 TSPEARQ8WU66 669 aa11.79□□□□□ -0.52
COL12A1-202ENST00000345356 MTERF1Q99551 399 aaKnown RBP11.79□□□□□ -0.52
COL12A1-202ENST00000345356 GLIS2Q9BZE0 524 aaPredicted RBP11.79□□□□□ -0.52
COL12A1-202ENST00000345356 NAA50Q9GZZ1 169 aaKnown RBP11.79□□□□□ -0.52
COL12A1-202ENST00000345356 OCEL1Q9H607 264 aa11.79□□□□□ -0.52
COL12A1-202ENST00000345356 ARMC1Q9NVT9 282 aa11.79□□□□□ -0.52
COL12A1-202ENST00000345356 HMGXB4Q9UGU5 601 aa11.79□□□□□ -0.52
COL12A1-202ENST00000345356 C2orf92A0A1B0GVN3 265 aa11.79□□□□□ -0.52
COL12A1-202ENST00000345356 AGAP5A6NIR3 686 aa11.79□□□□□ -0.52
COL12A1-202ENST00000345356 B4GAT1O43505 415 aa11.79□□□□□ -0.52
COL12A1-202ENST00000345356 C1RP00736 705 aa11.79□□□□□ -0.52
COL12A1-202ENST00000345356 RHOQP17081 205 aa11.79□□□□□ -0.52
COL12A1-202ENST00000345356 PTGER3P43115 390 aa11.79□□□□□ -0.52
COL12A1-202ENST00000345356 DNASE1L1P49184 302 aa11.79□□□□□ -0.52
COL12A1-202ENST00000345356 GBX2P52951 348 aaPredicted RBP11.79□□□□□ -0.52
COL12A1-202ENST00000345356 CD47Q08722 323 aa11.79□□□□□ -0.52
COL12A1-202ENST00000345356 GALEQ14376 348 aa11.79□□□□□ -0.52
COL12A1-202ENST00000345356 GRB7Q14451 532 aa11.79□□□□□ -0.52
COL12A1-202ENST00000345356 SCGB2B2Q4G0G5 96 aa11.79□□□□□ -0.52
COL12A1-202ENST00000345356 SNX20Q7Z614 316 aa11.79□□□□□ -0.52
COL12A1-202ENST00000345356 ZC3H3Q8IXZ2 948 aaKnown RBP11.79□□□□□ -0.52
COL12A1-202ENST00000345356 PPA2Q9H2U2 334 aa11.79□□□□□ -0.52
COL12A1-202ENST00000345356 MFSD1Q9H3U5 465 aa11.79□□□□□ -0.52
COL12A1-202ENST00000345356 TAS2R10Q9NYW0 307 aa11.79□□□□□ -0.52
COL12A1-202ENST00000345356 WRAP73Q9P2S5 460 aaPredicted RBP11.79□□□□□ -0.52
COL12A1-202ENST00000345356 MGAT4CQ9UBM8 478 aa11.79□□□□□ -0.52
COL12A1-202ENST00000345356 FBXW11Q9UKB1 542 aa11.79□□□□□ -0.52
COL12A1-202ENST00000345356 YARS2Q9Y2Z4 477 aaKnown RBP11.79□□□□□ -0.52
COL12A1-202ENST00000345356 NOP16Q9Y3C1 178 aaKnown RBP11.79□□□□□ -0.52
COL12A1-202ENST00000345356 PCDHGA7Q9Y5G6 932 aa11.79□□□□□ -0.52
COL12A1-202ENST00000345356 A0A1W2PRQ8 180 aa11.79□□□□□ -0.52
COL12A1-202ENST00000345356 ZNF705EA8MWA4 302 aaPredicted RBP11.79□□□□□ -0.52
COL12A1-202ENST00000345356 ENPP3O14638 875 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms