RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 FAM234BA2RU67 622 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 FAM86C2PA6NEL3 165 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 WASH4PA8MWX3 477 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 RGS5O15539 181 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 SCELO95171 688 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 ITGB7P26010 798 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 SLC6A4P31645 630 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 IL12RB1P42701 662 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 RPS15P62841 145 aaKnown RBP15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 FBXW8Q8N3Y1 598 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 ZNF527Q8NB42 609 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 DLGAP2Q9P1A6 1054 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 MAN1A2O60476 641 aa15.94■□□□□ 0.14
SMARCA4-201ENST00000344626 SRFP11831 508 aa15.94■□□□□ 0.14
SMARCA4-201ENST00000344626 TRIM71Q2Q1W2 868 aaKnown RBP15.94■□□□□ 0.14
SMARCA4-201ENST00000344626 TSPAN33Q86UF1 283 aa15.94■□□□□ 0.14
SMARCA4-201ENST00000344626 FAM98AQ8NCA5 519 aaKnown RBP15.94■□□□□ 0.14
SMARCA4-201ENST00000344626 MOSPD2Q8NHP6 518 aa15.94■□□□□ 0.14
SMARCA4-201ENST00000344626 ADAMTS19Q8TE59 1207 aa15.94■□□□□ 0.14
SMARCA4-201ENST00000344626 RORBQ92753 470 aa15.94■□□□□ 0.14
SMARCA4-201ENST00000344626 TBC1D10AQ9BXI6 508 aa15.94■□□□□ 0.14
SMARCA4-201ENST00000344626 CD244Q9BZW8 370 aa15.94■□□□□ 0.14
SMARCA4-201ENST00000344626 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.94■□□□□ 0.141e-10■■■■■ 33
SMARCA4-201ENST00000344626 LYARQ9NX58 379 aaKnown RBP15.94■□□□□ 0.14
SMARCA4-201ENST00000344626 REM1O75628 298 aa15.94■□□□□ 0.14
SMARCA4-201ENST00000344626 LEPRP48357 1165 aaKnown RBP15.94■□□□□ 0.14
SMARCA4-201ENST00000344626 GOLGA7Q7Z5G4 137 aa15.94■□□□□ 0.14
SMARCA4-201ENST00000344626 PLXDC1Q8IUK5 500 aa15.94■□□□□ 0.14
SMARCA4-201ENST00000344626 GLIS1Q8NBF1 620 aa15.94■□□□□ 0.14
SMARCA4-201ENST00000344626 OSBPL7Q9BZF2 842 aa15.94■□□□□ 0.14
SMARCA4-201ENST00000344626 NOL6Q9H6R4 1146 aaKnown RBP15.94■□□□□ 0.14
SMARCA4-201ENST00000344626 EGFL7Q9UHF1 273 aa15.94■□□□□ 0.14
SMARCA4-201ENST00000344626 XKRYO14609 159 aa15.94■□□□□ 0.14
SMARCA4-201ENST00000344626 HNRNPH1P31943 449 aaKnown RBP15.94■□□□□ 0.14
SMARCA4-201ENST00000344626 SLC10A2Q12908 348 aaPredicted RBP15.94■□□□□ 0.14
SMARCA4-201ENST00000344626 RNFT2Q96EX2 444 aa15.94■□□□□ 0.14
SMARCA4-201ENST00000344626 CCDC159P0C7I6 412 aa15.94■□□□□ 0.14
SMARCA4-201ENST00000344626 AQP1P29972 269 aa15.94■□□□□ 0.14
SMARCA4-201ENST00000344626 CRISP3P54108 245 aa15.94■□□□□ 0.14
SMARCA4-201ENST00000344626 ADAM17P78536 824 aa15.94■□□□□ 0.14
SMARCA4-201ENST00000344626 DCP2Q8IU60 420 aaKnown RBP15.94■□□□□ 0.14
SMARCA4-201ENST00000344626 EID2Q8N6I1 236 aa15.94■□□□□ 0.14
SMARCA4-201ENST00000344626 LINC01465Q8N7H1 131 aa15.94■□□□□ 0.14
SMARCA4-201ENST00000344626 TMIEQ8NEW7 156 aa15.94■□□□□ 0.14
SMARCA4-201ENST00000344626 MGME1Q9BQP7 344 aa15.94■□□□□ 0.14
SMARCA4-201ENST00000344626 CDH22Q9UJ99 828 aa15.94■□□□□ 0.14
SMARCA4-201ENST00000344626 RARRES3Q9UL19 164 aa15.94■□□□□ 0.14
SMARCA4-201ENST00000344626 STX11O75558 287 aa15.93■□□□□ 0.14
SMARCA4-201ENST00000344626 PRG2P13727 222 aa15.93■□□□□ 0.14
SMARCA4-201ENST00000344626 PIK3CBP42338 1070 aa15.93■□□□□ 0.14
SMARCA4-201ENST00000344626 DLG1Q12959 904 aa15.93■□□□□ 0.14
SMARCA4-201ENST00000344626 REP15Q6BDI9 236 aa15.93■□□□□ 0.14
SMARCA4-201ENST00000344626 ZDHHC1Q8WTX9 485 aa15.93■□□□□ 0.14
SMARCA4-201ENST00000344626 SLC38A4Q969I6 547 aa15.93■□□□□ 0.14
SMARCA4-201ENST00000344626 IRF2BPLQ9H1B7 796 aa15.93■□□□□ 0.14
SMARCA4-201ENST00000344626 MYRFQ9Y2G1 1151 aa15.93■□□□□ 0.14
SMARCA4-201ENST00000344626 C2CD4DB7Z1M9 353 aa15.93■□□□□ 0.14
SMARCA4-201ENST00000344626 IDH3AP50213 366 aa15.93■□□□□ 0.14
SMARCA4-201ENST00000344626 FAM174BQ3ZCQ3 159 aa15.93■□□□□ 0.14
SMARCA4-201ENST00000344626 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.93■□□□□ 0.14
SMARCA4-201ENST00000344626 OBP2AQ9NY56 170 aa15.93■□□□□ 0.14
SMARCA4-201ENST00000344626 CNOT6Q9ULM6 557 aaKnown RBP15.93■□□□□ 0.14
SMARCA4-201ENST00000344626 HYAL1Q12794 435 aa15.93■□□□□ 0.14
SMARCA4-201ENST00000344626 CDKN3Q16667 212 aa15.93■□□□□ 0.14
SMARCA4-201ENST00000344626 PGAM4Q8N0Y7 254 aa15.93■□□□□ 0.14
SMARCA4-201ENST00000344626 MMABQ96EY8 250 aaPredicted RBP15.93■□□□□ 0.14
SMARCA4-201ENST00000344626 CDK15Q96Q40 435 aa15.93■□□□□ 0.14
SMARCA4-201ENST00000344626 KCNH6Q9H252 994 aa15.93■□□□□ 0.14
SMARCA4-201ENST00000344626 MUTYHQ9UIF7 546 aa15.93■□□□□ 0.14
SMARCA4-201ENST00000344626 ADAMTS7Q9UKP4 1686 aa15.93■□□□□ 0.14
SMARCA4-201ENST00000344626 KLK1P06870 262 aa15.93■□□□□ 0.14
SMARCA4-201ENST00000344626 VWA5B1Q5TIE3 1220 aa15.93■□□□□ 0.14
SMARCA4-201ENST00000344626 JAZF1Q86VZ6 243 aa15.93■□□□□ 0.14
SMARCA4-201ENST00000344626 SMYD1Q8NB12 490 aa15.93■□□□□ 0.14
SMARCA4-201ENST00000344626 NMUR2Q9GZQ4 415 aa15.93■□□□□ 0.14
SMARCA4-201ENST00000344626 MANBAO00462 879 aa15.92■□□□□ 0.14
SMARCA4-201ENST00000344626 SIX3O95343 332 aaPredicted RBP15.92■□□□□ 0.14
SMARCA4-201ENST00000344626 CLPTM1O96005 669 aa15.92■□□□□ 0.14
SMARCA4-201ENST00000344626 IL7RP16871 459 aa15.92■□□□□ 0.14
SMARCA4-201ENST00000344626 VSX2P58304 361 aaPredicted RBP15.92■□□□□ 0.14
SMARCA4-201ENST00000344626 GPX6P59796 221 aa15.92■□□□□ 0.14
SMARCA4-201ENST00000344626 TGFBIQ15582 683 aa15.92■□□□□ 0.14
SMARCA4-201ENST00000344626 FGD2Q7Z6J4 655 aa15.92■□□□□ 0.14
SMARCA4-201ENST00000344626 APLFQ8IW19 511 aaPredicted RBP15.92■□□□□ 0.14
SMARCA4-201ENST00000344626 C1orf52Q8N6N3 182 aaKnown RBP15.92■□□□□ 0.14
SMARCA4-201ENST00000344626 SDHAF3Q9NRP4 125 aa15.92■□□□□ 0.14
SMARCA4-201ENST00000344626 LOC730098B7Z3J9 87 aa15.92■□□□□ 0.14
SMARCA4-201ENST00000344626 EGFP01133 1207 aa15.92■□□□□ 0.14
SMARCA4-201ENST00000344626 SAGP10523 405 aaPredicted RBP15.92■□□□□ 0.14
SMARCA4-201ENST00000344626 HOXC12P31275 282 aa15.92■□□□□ 0.14
SMARCA4-201ENST00000344626 TP53INP2Q8IXH6 220 aa15.92■□□□□ 0.14
SMARCA4-201ENST00000344626 TBL1XR1Q9BZK7 514 aa15.92■□□□□ 0.14
SMARCA4-201ENST00000344626 ZCCHC3Q9NUD5 404 aaKnown RBP15.92■□□□□ 0.14
SMARCA4-201ENST00000344626 FABP3P05413 133 aa15.92■□□□□ 0.14
SMARCA4-201ENST00000344626 PAOXQ6QHF9 649 aa15.92■□□□□ 0.14
SMARCA4-201ENST00000344626 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.92■□□□□ 0.14
SMARCA4-201ENST00000344626 TMEM125Q96AQ2 219 aa15.92■□□□□ 0.14
SMARCA4-201ENST00000344626 ZNF354BQ96LW1 612 aa15.92■□□□□ 0.14
SMARCA4-201ENST00000344626 GALPQ9UBC7 116 aa15.92■□□□□ 0.14
SMARCA4-201ENST00000344626 CA5BQ9Y2D0 317 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms