RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 KATNBL1Q9H079 304 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 NIT2Q9NQR4 276 aa6.04□□□□□ -1.44
VCAN-203ENST00000343200 INMT-MINDY4F8WBC2 141 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 EEF1E1O43324 174 aaKnown RBP6.03□□□□□ -1.44
VCAN-203ENST00000343200 RASAL1O95294 804 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 HNRNPLP14866 589 aaKnown RBP eCLIP6.03□□□□□ -1.441e-9■■■■■ 31.5
VCAN-203ENST00000343200 TFEBP19484 476 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 BDKRB2P30411 391 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 TKTL1P51854 596 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 ATP6V0D1P61421 351 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 HNRNPA0Q13151 305 aaKnown RBP6.03□□□□□ -1.44
VCAN-203ENST00000343200 ATXN7L3Q14CW9 347 aaPredicted RBP6.03□□□□□ -1.44
VCAN-203ENST00000343200 TDRD10Q5VZ19 366 aaKnown RBP6.03□□□□□ -1.44
VCAN-203ENST00000343200 CUZD1Q86UP6 607 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 GMCL1P1Q8NEA9 526 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 PLPP5Q8NEB5 264 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 PPP1R16AQ96I34 528 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 PAPOLGQ9BWT3 736 aaKnown RBP6.03□□□□□ -1.44
VCAN-203ENST00000343200 CALML5Q9NZT1 146 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 ASH2LQ9UBL3 628 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 REV1Q9UBZ9 1251 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 BICRAQ9NZM4 1560 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 NWD2Q9ULI1 1742 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 ZNF609O15014 1411 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 MEN1O00255 615 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 EI24O14681 340 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 ARPC5O15511 151 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 LCMT2O60294 686 aaKnown RBP6.03□□□□□ -1.44
VCAN-203ENST00000343200 SRPRAP08240 638 aaKnown RBP6.03□□□□□ -1.44
VCAN-203ENST00000343200 HOXC12P31275 282 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 MPIP34949 423 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 GPR149Q86SP6 731 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 KDM1BQ8NB78 822 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 ENGASEQ8NFI3 743 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 OR5K1Q8NHB7 308 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 MRPS31Q92665 395 aaKnown RBP6.03□□□□□ -1.44
VCAN-203ENST00000343200 MAF1Q9H063 256 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 A0A0G2JN53 185 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 URADA6NGE7 173 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 HEXBP07686 556 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 BPGMP07738 259 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 DPEP1P16444 411 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 SCARB2Q14108 478 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 ABRAXAS2Q15018 415 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 LRRC37A5PQ49AS3 106 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 SETMARQ53H47 684 aaPredicted RBP6.03□□□□□ -1.44
VCAN-203ENST00000343200 GLYATQ6IB77 296 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 RHOUQ7L0Q8 258 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 SLC9A9Q8IVB4 645 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 CNOT9Q92600 299 aaKnown RBP6.03□□□□□ -1.44
VCAN-203ENST00000343200 SMCO4Q9NRQ5 59 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 TNFRSF10DQ9UBN6 386 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 ADAM18Q9Y3Q7 739 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 ST14Q9Y5Y6 855 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 PLB1Q6P1J6 1458 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 TANC1Q9C0D5 1861 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 ZNF236Q9UL36 1845 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 CPSF4LA6NMK7 179 aaKnown RBP6.03□□□□□ -1.44
VCAN-203ENST00000343200 ITM2AO43736 263 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 LCKP06239 509 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 SIM2Q14190 667 aaPredicted RBP6.03□□□□□ -1.44
VCAN-203ENST00000343200 HSDL2Q6YN16 418 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 DPY19L4Q7Z388 723 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 CBWD1Q9BRT8 395 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 PELOQ9BRX2 385 aaKnown RBP6.03□□□□□ -1.44
VCAN-203ENST00000343200 NIPSNAP3BQ9BS92 247 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 RBCK1Q9BYM8 510 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 DNAJC18Q9H819 358 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 MEPEQ9NQ76 525 aaPredicted RBP6.03□□□□□ -1.44
VCAN-203ENST00000343200 DNAJB9Q9UBS3 223 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 SH2B3Q9UQQ2 575 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 C2orf16Q68DN1 1984 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 PSME4Q14997 1843 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 TGOLN2O43493 480 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 KERAO60938 352 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 LILRB5O75023 590 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 ARL6IP5O75915 188 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 FGBP02675 491 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 GSTM3P21266 225 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 PRKCHP24723 683 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 AQP1P29972 269 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 LBHQ53QV2 105 aaPredicted RBP6.03□□□□□ -1.44
VCAN-203ENST00000343200 TAPT1Q6NXT6 567 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 XKR5Q6UX68 686 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 SLC9B2Q86UD5 537 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 MYLIPQ8WY64 445 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 PPCDCQ96CD2 204 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 HSFY1Q96LI6 401 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 C8orf37Q96NL8 207 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 KCNIP2Q9NS61 270 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 THUMPD1Q9NXG2 353 aaKnown RBP6.03□□□□□ -1.44
VCAN-203ENST00000343200 SIX4Q9UIU6 781 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 VPS28Q9UK41 221 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 PTPRBP23467 1997 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 SC5DO75845 299 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 CSF2P04141 144 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 HTR7P34969 479 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 CREMQ03060 361 aa6.03□□□□□ -1.44
VCAN-203ENST00000343200 TARDBPQ13148 414 aaKnown RBP eCLIP6.03□□□□□ -1.44
VCAN-203ENST00000343200 ABLIM2Q6H8Q1 611 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms