RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 PMF1-BGLAPU3KQ54 211 aa13.98□□□□□ -0.17
CPSF7-201ENST00000340437 AIREO43918 545 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 JRKO75564 520 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 ACRV1P26436 265 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 CCR7P32248 378 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 RCVRNP35243 200 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 GBX1Q14549 363 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 OXA1LQ15070 435 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 UAP1L1Q3KQV9 507 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 XKR6Q5GH73 641 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 ATG9BQ674R7 924 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 PJA1Q8NG27 643 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 SLC22A1O15245 554 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 ACPPP15309 386 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 RRM2P31350 389 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 KDELR2P33947 212 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 PPP3CCP48454 512 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 RPS3AP61247 264 aaKnown RBP13.97□□□□□ -0.17
CPSF7-201ENST00000340437 ALG1LQ6GMV1 187 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 CCDC103Q8IW40 242 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 NELL1Q92832 810 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 RDH12Q96NR8 316 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 COPS8Q99627 209 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 SLC32A1Q9H598 525 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 ZDHHC6Q9H6R6 413 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 EXOSC4Q9NPD3 245 aaKnown RBP13.97□□□□□ -0.17
CPSF7-201ENST00000340437 STARD7Q9NQZ5 370 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 TAS2R16Q9NYV7 291 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 TMEM221A6NGB7 291 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 NPIPB15A6NHN6 443 aaPredicted RBP13.97□□□□□ -0.17
CPSF7-201ENST00000340437 CYP7B1O75881 506 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 RETP07949 1114 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 CCDC159P0C7I6 412 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 LAMP1P11279 417 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 CD6P30203 668 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 CLDN8P56748 225 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 GABARAPL2P60520 117 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 ABHD18Q0P651 414 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 HKDC1Q2TB90 917 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 RFX4Q33E94 735 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 PRSS36Q5K4E3 855 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 NOXRED1Q6NXP6 359 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 IFNL1Q8IU54 200 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 CNDP2Q96KP4 475 aaKnown RBP13.97□□□□□ -0.17
CPSF7-201ENST00000340437 ACOT13Q9NPJ3 140 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 IL37Q9NZH6 218 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 OGDHLQ9ULD0 1010 aa13.97□□□□□ -0.17
CPSF7-201ENST00000340437 MAGEB17A8MXT2 336 aa13.96□□□□□ -0.17
CPSF7-201ENST00000340437 FAM220BPB1ANY3 271 aa13.96□□□□□ -0.17
CPSF7-201ENST00000340437 AQP9O43315 295 aa13.96□□□□□ -0.17
CPSF7-201ENST00000340437 PCDHGA12O60330 932 aa13.96□□□□□ -0.17
CPSF7-201ENST00000340437 AOC2O75106 756 aa13.96□□□□□ -0.17
CPSF7-201ENST00000340437 FXNQ16595 210 aa13.96□□□□□ -0.17
CPSF7-201ENST00000340437 RGMBQ6NW40 437 aa13.96□□□□□ -0.17
CPSF7-201ENST00000340437 NEK5Q6P3R8 708 aa13.96□□□□□ -0.17
CPSF7-201ENST00000340437 SHQ1Q6PI26 577 aaKnown RBP13.96□□□□□ -0.17
CPSF7-201ENST00000340437 DNASE1L2Q92874 299 aa13.96□□□□□ -0.17
CPSF7-201ENST00000340437 SMG9Q9H0W8 520 aaKnown RBP13.96□□□□□ -0.17
CPSF7-201ENST00000340437 CCNDBP1O95273 360 aa13.96□□□□□ -0.17
CPSF7-201ENST00000340437 CKMP06732 381 aa13.96□□□□□ -0.17
CPSF7-201ENST00000340437 CHRM5P08912 532 aaPredicted RBP13.96□□□□□ -0.17
CPSF7-201ENST00000340437 GADD45AP24522 165 aa13.96□□□□□ -0.17
CPSF7-201ENST00000340437 DNAJA1P31689 397 aaKnown RBP13.96□□□□□ -0.17
CPSF7-201ENST00000340437 SPAM1P38567 509 aa13.96□□□□□ -0.17
CPSF7-201ENST00000340437 LIPAP38571 399 aa13.96□□□□□ -0.17
CPSF7-201ENST00000340437 ALDH7A1P49419 539 aaKnown RBP13.96□□□□□ -0.17
CPSF7-201ENST00000340437 ACLYP53396 1101 aa13.96□□□□□ -0.17
CPSF7-201ENST00000340437 ILF2Q12905 390 aaKnown RBP13.96□□□□□ -0.17
CPSF7-201ENST00000340437 TCEA2Q15560 299 aa13.96□□□□□ -0.17
CPSF7-201ENST00000340437 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.96□□□□□ -0.177e-16■■□□□ 13
CPSF7-201ENST00000340437 GPRC6AQ5T6X5 926 aa13.96□□□□□ -0.17
CPSF7-201ENST00000340437 LRRC66Q68CR7 880 aa13.96□□□□□ -0.17
CPSF7-201ENST00000340437 TMEM53Q6P2H8 277 aa13.96□□□□□ -0.17
CPSF7-201ENST00000340437 FAM83FQ8NEG4 500 aaPredicted RBP13.96□□□□□ -0.17
CPSF7-201ENST00000340437 CAPSLQ8WWF8 208 aa13.96□□□□□ -0.17
CPSF7-201ENST00000340437 S100ZQ8WXG8 99 aa13.96□□□□□ -0.17
CPSF7-201ENST00000340437 SCAMP4Q969E2 229 aa13.96□□□□□ -0.17
CPSF7-201ENST00000340437 GTPBP3Q969Y2 492 aaKnown RBP13.96□□□□□ -0.17
CPSF7-201ENST00000340437 MROQ9BYG7 248 aa13.96□□□□□ -0.17
CPSF7-201ENST00000340437 AKIP1Q9NQ31 210 aa13.96□□□□□ -0.17
CPSF7-201ENST00000340437 RHCGQ9UBD6 479 aa13.96□□□□□ -0.17
CPSF7-201ENST00000340437 GAPDHSO14556 408 aaPredicted RBP13.96□□□□□ -0.18
CPSF7-201ENST00000340437 CTSOP43234 321 aaPredicted RBP13.96□□□□□ -0.18
CPSF7-201ENST00000340437 SLC35A2P78381 396 aa13.96□□□□□ -0.18
CPSF7-201ENST00000340437 ACSM2AQ08AH3 577 aa13.96□□□□□ -0.18
CPSF7-201ENST00000340437 CBX2Q14781 532 aaPredicted RBP13.96□□□□□ -0.18
CPSF7-201ENST00000340437 VMACQ2NL98 169 aa13.96□□□□□ -0.18
CPSF7-201ENST00000340437 ACSM2BQ68CK6 577 aa13.96□□□□□ -0.18
CPSF7-201ENST00000340437 NLGN4XQ8N0W4 816 aa13.96□□□□□ -0.18
CPSF7-201ENST00000340437 CACTIN-AS1Q8N1I8 211 aa13.96□□□□□ -0.18
CPSF7-201ENST00000340437 NXPE1Q8N323 547 aa13.96□□□□□ -0.18
CPSF7-201ENST00000340437 STX19Q8N4C7 294 aa13.96□□□□□ -0.18
CPSF7-201ENST00000340437 OR4K1Q8NGD4 311 aa13.96□□□□□ -0.18
CPSF7-201ENST00000340437 DSN1Q9H410 356 aa13.96□□□□□ -0.18
CPSF7-201ENST00000340437 PALMDQ9NP74 551 aa13.96□□□□□ -0.18
CPSF7-201ENST00000340437 RAD18Q9NS91 495 aa13.96□□□□□ -0.18
CPSF7-201ENST00000340437 GPR83Q9NYM4 423 aa13.96□□□□□ -0.18
CPSF7-201ENST00000340437 FZD4Q9ULV1 537 aa13.96□□□□□ -0.18
CPSF7-201ENST00000340437 PCDHGA4Q9Y5G9 962 aa13.96□□□□□ -0.18
CPSF7-201ENST00000340437 NINQ8N4C6 2090 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms