RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 PPP5CP53041 499 aa12.55□□□□□ -0.4
USP47-202ENST00000339865 NFE2L1Q14494 772 aa12.55□□□□□ -0.4
USP47-202ENST00000339865 NTRK3Q16288 839 aa12.55□□□□□ -0.4
USP47-202ENST00000339865 CYP27C1Q4G0S4 372 aa12.55□□□□□ -0.4
USP47-202ENST00000339865 BOLLQ8N9W6 283 aaKnown RBP12.55□□□□□ -0.4
USP47-202ENST00000339865 ZNF527Q8NB42 609 aa12.55□□□□□ -0.4
USP47-202ENST00000339865 SPOCK2Q92563 424 aa12.55□□□□□ -0.4
USP47-202ENST00000339865 ZBED6CLQ96FA7 236 aaPredicted RBP12.55□□□□□ -0.4
USP47-202ENST00000339865 ZBTB45Q96K62 511 aaPredicted RBP12.55□□□□□ -0.4
USP47-202ENST00000339865 ALPK1Q96QP1 1244 aa12.55□□□□□ -0.4
USP47-202ENST00000339865 AGAP2Q99490 1192 aa12.55□□□□□ -0.4
USP47-202ENST00000339865 ACP6Q9NPH0 428 aa12.55□□□□□ -0.4
USP47-202ENST00000339865 SCGB1D1O95968 90 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 CAMLGP49069 296 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 GCNT1Q02742 428 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 PDE12Q6L8Q7 609 aaKnown RBP12.54□□□□□ -0.4
USP47-202ENST00000339865 PAPD4Q6PIY7 484 aaKnown RBP12.54□□□□□ -0.4
USP47-202ENST00000339865 ZNF283Q8N7M2 679 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 IPPKQ9H8X2 491 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 USP29Q9HBJ7 922 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 ZNF701Q9NV72 531 aaPredicted RBP12.54□□□□□ -0.4
USP47-202ENST00000339865 ARMC1Q9NVT9 282 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 AHSA1O95433 338 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 HNRNPKP61978 463 aaKnown RBP eCLIP12.54□□□□□ -0.4
USP47-202ENST00000339865 OR4K2Q8NGD2 314 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 TBC1D16Q8TBP0 767 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 RRNAD1Q96FB5 475 aaKnown RBP12.54□□□□□ -0.4
USP47-202ENST00000339865 TTTY10Q9BZA0 68 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 FN3KQ9H479 309 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 POMPQ9Y244 141 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 NRCAMQ92823 1304 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 RGS9O75916 674 aaPredicted RBP12.54□□□□□ -0.4
USP47-202ENST00000339865 INSRRP14616 1297 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 MATN1P21941 496 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 DNASE1P24855 282 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 SLC26A2P50443 739 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 ERVK-25P63136 954 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 TLE3Q04726 772 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 BSCL2Q96G97 398 aaPredicted RBP12.54□□□□□ -0.4
USP47-202ENST00000339865 MYRFLQ96LU7 910 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 ZDHHC15Q96MV8 337 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 UNKLQ9H9P5 680 aaKnown RBP12.54□□□□□ -0.4
USP47-202ENST00000339865 PRMT8Q9NR22 394 aaPredicted RBP12.54□□□□□ -0.4
USP47-202ENST00000339865 TAS2R9Q9NYW1 312 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 TMEM150BA6NC51 233 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 BRINP1O60477 761 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 CRYZL1O95825 349 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 PAK4O96013 591 aaPredicted RBP12.54□□□□□ -0.4
USP47-202ENST00000339865 FGF1P05230 155 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 RPS17P08708 135 aaKnown RBP12.54□□□□□ -0.4
USP47-202ENST00000339865 CREB1P16220 341 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 RBMXP38159 391 aaKnown RBP12.54□□□□□ -0.4
USP47-202ENST00000339865 NTRK2Q16620 822 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 COMMD7Q86VX2 200 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 PDZD9Q8IXQ8 264 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 PSD4Q8NDX1 1056 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 C9orf43Q8TAL5 461 aaPredicted RBP12.54□□□□□ -0.4
USP47-202ENST00000339865 SLC35G5Q96KT7 338 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 PKP4Q99569 1192 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 MKKSQ9NPJ1 570 aaPredicted RBP12.54□□□□□ -0.4
USP47-202ENST00000339865 FAM205AQ6ZU69 1335 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 IGSF1Q8N6C5 1336 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 OR6C65A6NJZ3 312 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 A8MU76 341 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 SLITRK5O94991 958 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 TOB1P50616 345 aaPredicted RBP12.54□□□□□ -0.4
USP47-202ENST00000339865 PCBP2Q15366 365 aaKnown RBP eCLIP12.54□□□□□ -0.4
USP47-202ENST00000339865 DEFB115Q30KQ5 88 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 MAP1SQ66K74 1059 aaPredicted RBP12.54□□□□□ -0.4
USP47-202ENST00000339865 DNM1P34Q6PK57 102 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 WDSUB1Q8N9V3 476 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 OR10G2Q8NGC3 310 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 FAM83CQ9BQN1 747 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 WRAP53Q9BUR4 548 aaKnown RBP12.54□□□□□ -0.4
USP47-202ENST00000339865 CD320Q9NPF0 282 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 AFDNP55196 1824 aaKnown RBP12.54□□□□□ -0.4
USP47-202ENST00000339865 NRKQ7Z2Y5 1582 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 CPED1A4D0V7 1026 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 PIP5K1CO60331 668 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 CPNE6O95741 557 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 SERPINA7P05543 415 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 LSSP48449 732 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 WSCD1Q658N2 575 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 CFAP77Q6ZQR2 320 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 OR5K1Q8NHB7 308 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 NSMAFQ92636 917 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 TP63Q9H3D4 680 aaPredicted RBP12.54□□□□□ -0.4
USP47-202ENST00000339865 ACSL5Q9ULC5 683 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 ZNRF3Q9ULT6 936 aa12.54□□□□□ -0.4
USP47-202ENST00000339865 NUP205Q92621 2012 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 CACNA1DQ01668 2161 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 IDH3AP50213 366 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 C1QTNF8P60827 252 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 ENPP2Q13822 863 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 SLC1A5Q15758 541 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 CHRFAM7AQ494W8 412 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 C12orf29Q8N999 325 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 TMEM145Q8NBT3 493 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 TERB2Q8NHR7 220 aa12.53□□□□□ -0.4
USP47-202ENST00000339865 ROPN1LQ96C74 230 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms