RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 HNRNPCL4P0DMR1 293 aa9.4□□□□□ -0.9
PTCHD4-201ENST00000339488 CXCL3P19876 107 aa9.4□□□□□ -0.9
PTCHD4-201ENST00000339488 IGFBP5P24593 272 aa9.4□□□□□ -0.9
PTCHD4-201ENST00000339488 RPS19P39019 145 aaKnown RBP9.4□□□□□ -0.9
PTCHD4-201ENST00000339488 MAP2K3P46734 347 aa9.4□□□□□ -0.9
PTCHD4-201ENST00000339488 PCP4P48539 62 aa9.4□□□□□ -0.9
PTCHD4-201ENST00000339488 RAB13P51153 203 aa9.4□□□□□ -0.9
PTCHD4-201ENST00000339488 KCNQ1P51787 676 aa9.4□□□□□ -0.9
PTCHD4-201ENST00000339488 FGL1Q08830 312 aa9.4□□□□□ -0.9
PTCHD4-201ENST00000339488 SEZ6Q53EL9 994 aa9.4□□□□□ -0.9
PTCHD4-201ENST00000339488 FBXO48Q5FWF7 155 aa9.4□□□□□ -0.9
PTCHD4-201ENST00000339488 CRTC1Q6UUV9 634 aa9.4□□□□□ -0.9
PTCHD4-201ENST00000339488 HACD2Q6Y1H2 254 aa9.4□□□□□ -0.9
PTCHD4-201ENST00000339488 DBX2Q6ZNG2 339 aa9.4□□□□□ -0.9
PTCHD4-201ENST00000339488 LRRC8DQ7L1W4 858 aa9.4□□□□□ -0.9
PTCHD4-201ENST00000339488 MINDY1Q8N5J2 469 aa9.4□□□□□ -0.9
PTCHD4-201ENST00000339488 DNAJC5GQ8N7S2 189 aa9.4□□□□□ -0.9
PTCHD4-201ENST00000339488 CDYL2Q8N8U2 506 aa9.4□□□□□ -0.9
PTCHD4-201ENST00000339488 TFAP2BQ92481 460 aa9.4□□□□□ -0.9
PTCHD4-201ENST00000339488 MYLPFQ96A32 169 aa9.4□□□□□ -0.9
PTCHD4-201ENST00000339488 FAM167AQ96KS9 214 aa9.4□□□□□ -0.9
PTCHD4-201ENST00000339488 SORCS2Q96PQ0 1159 aa9.4□□□□□ -0.9
PTCHD4-201ENST00000339488 CPNE1Q99829 537 aa9.4□□□□□ -0.9
PTCHD4-201ENST00000339488 RBM4BQ9BQ04 359 aaKnown RBP9.4□□□□□ -0.9
PTCHD4-201ENST00000339488 WDR18Q9BV38 432 aa9.4□□□□□ -0.9
PTCHD4-201ENST00000339488 RBM4Q9BWF3 364 aaKnown RBP9.4□□□□□ -0.9
PTCHD4-201ENST00000339488 HCN3Q9P1Z3 774 aa9.4□□□□□ -0.9
PTCHD4-201ENST00000339488 LIMD1Q9UGP4 676 aa9.4□□□□□ -0.9
PTCHD4-201ENST00000339488 TLR6Q9Y2C9 796 aa9.4□□□□□ -0.9
PTCHD4-201ENST00000339488 PRKAB1Q9Y478 270 aa9.4□□□□□ -0.9
PTCHD4-201ENST00000339488 FAM240BA0A1B0GVZ2 78 aa9.4□□□□□ -0.91
PTCHD4-201ENST00000339488 UBA6A0AVT1 1052 aaPredicted RBP9.4□□□□□ -0.91
PTCHD4-201ENST00000339488 MTMR11A4FU01 709 aa9.4□□□□□ -0.91
PTCHD4-201ENST00000339488 PRKRAO75569 313 aaKnown RBP9.4□□□□□ -0.91
PTCHD4-201ENST00000339488 CELF2O95319 508 aaKnown RBP9.4□□□□□ -0.91
PTCHD4-201ENST00000339488 C1RP00736 705 aa9.4□□□□□ -0.91
PTCHD4-201ENST00000339488 URODP06132 367 aa9.4□□□□□ -0.91
PTCHD4-201ENST00000339488 CNPP09543 421 aaKnown RBP9.4□□□□□ -0.91
PTCHD4-201ENST00000339488 CYP19A1P11511 503 aaPredicted RBP9.4□□□□□ -0.91
PTCHD4-201ENST00000339488 PGAM1P18669 254 aa9.4□□□□□ -0.91
PTCHD4-201ENST00000339488 DCTP40126 519 aa9.4□□□□□ -0.91
PTCHD4-201ENST00000339488 MAGEA12P43365 314 aa9.4□□□□□ -0.91
PTCHD4-201ENST00000339488 KIAA1024LP59773 190 aa9.4□□□□□ -0.91
PTCHD4-201ENST00000339488 BPIFB3P59826 476 aa9.4□□□□□ -0.91
PTCHD4-201ENST00000339488 RELQ04864 619 aaPredicted RBP9.4□□□□□ -0.91
PTCHD4-201ENST00000339488 CYP24A1Q07973 514 aa9.4□□□□□ -0.91
PTCHD4-201ENST00000339488 RPS6KA2Q15349 733 aa9.4□□□□□ -0.91
PTCHD4-201ENST00000339488 TOMM20Q15388 145 aa9.4□□□□□ -0.91
PTCHD4-201ENST00000339488 TEAD4Q15561 434 aa9.4□□□□□ -0.91
PTCHD4-201ENST00000339488 FAM83EQ2M2I3 478 aa9.4□□□□□ -0.91
PTCHD4-201ENST00000339488 DET1Q7L5Y6 550 aa9.4□□□□□ -0.91
PTCHD4-201ENST00000339488 DPH6Q7L8W6 267 aa9.4□□□□□ -0.91
PTCHD4-201ENST00000339488 NLRC3Q7RTR2 1065 aa9.4□□□□□ -0.91
PTCHD4-201ENST00000339488 ZZZ3Q8IYH5 903 aa9.4□□□□□ -0.91
PTCHD4-201ENST00000339488 ARL6IP6Q8N6S5 226 aa9.4□□□□□ -0.91
PTCHD4-201ENST00000339488 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.4□□□□□ -0.91
PTCHD4-201ENST00000339488 NSMAFQ92636 917 aa9.4□□□□□ -0.91
PTCHD4-201ENST00000339488 ZBED6CLQ96FA7 236 aaPredicted RBP9.4□□□□□ -0.91
PTCHD4-201ENST00000339488 PGAP3Q96FM1 320 aaPredicted RBP9.4□□□□□ -0.91
PTCHD4-201ENST00000339488 NARS2Q96I59 477 aaKnown RBP9.4□□□□□ -0.91
PTCHD4-201ENST00000339488 MEAF6Q9HAF1 191 aa9.4□□□□□ -0.91
PTCHD4-201ENST00000339488 MKL2Q9ULH7 1088 aa9.4□□□□□ -0.91
PTCHD4-201ENST00000339488 TRAPPC4Q9Y296 219 aa9.4□□□□□ -0.91
PTCHD4-201ENST00000339488 YARS2Q9Y2Z4 477 aaKnown RBP9.4□□□□□ -0.91
PTCHD4-201ENST00000339488 LY75O60449 1722 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 UBXN8O00124 270 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 TRUB2O95900 331 aaKnown RBP9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 STSP08842 583 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 SLC35E2BP0CK96 405 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 RAP2AP10114 183 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 FPR3P25089 353 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 APEX1P27695 318 aaKnown RBP9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 GKP32189 559 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 EEF1A1P68104 462 aaKnown RBP9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 EEF1A2Q05639 463 aaKnown RBP9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 SEC23BQ15437 767 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 TAZQ16635 292 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 TSTQ16762 297 aaKnown RBP9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 PAN2Q504Q3 1202 aaKnown RBP9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 FAM98BQ52LJ0 330 aaKnown RBP9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 EEF1A1P5Q5VTE0 462 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 SCIMPQ6UWF3 145 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 MOB2Q70IA6 237 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 CEP97Q8IW35 865 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 SLC34A3Q8N130 599 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 ZNF655Q8N720 491 aaPredicted RBP9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 DCBLD1Q8N8Z6 715 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 OR11H7Q8NGC8 314 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 OR52K1Q8NGK4 314 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 OR6S1Q8NH40 331 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 ZNF675Q8TD23 568 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 STYXQ8WUJ0 223 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 PDXPQ96GD0 296 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 GSX2Q9BZM3 304 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 ANKEF1Q9NU02 776 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 GPR83Q9NYM4 423 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 AFF4Q9UHB7 1163 aaKnown RBP9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 ENTPD4Q9Y227 616 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 ZNF451Q9Y4E5 1061 aa9.39□□□□□ -0.91
PTCHD4-201ENST00000339488 COL5A3P25940 1745 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms