RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 GAL3ST1Q99999 423 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 ABHD16BQ9H3Z7 469 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 TUBB1Q9H4B7 451 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 ELOVL6Q9H5J4 265 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 RGS18Q9NS28 235 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 KIF17Q9P2E2 1029 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 AUP1Q9Y679 476 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 RANBP2P49792 3224 aaKnown RBP12.27□□□□□ -0.45
DFFB-202ENST00000339350 FXYD1O00168 92 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 MATN3O15232 486 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 PGLSO95336 258 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 KCNE1P15382 129 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 F8A1P23610 371 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 SLC6A2P23975 617 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 PRDX3P30048 256 aaKnown RBP12.27□□□□□ -0.45
DFFB-202ENST00000339350 RFC2P35250 354 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 CD47Q08722 323 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 SMYD5Q6GMV2 418 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 KIAA0930Q6ICG6 404 aaPredicted RBP12.27□□□□□ -0.45
DFFB-202ENST00000339350 MILR1Q7Z6M3 343 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 GPAT4Q86UL3 456 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 ZSWIM9Q86XI8 627 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 SLC5A11Q8WWX8 675 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 PTP4A1Q93096 173 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 TRNT1Q96Q11 434 aaKnown RBP12.27□□□□□ -0.45
DFFB-202ENST00000339350 CINPQ9BW66 212 aaPredicted RBP12.27□□□□□ -0.45
DFFB-202ENST00000339350 TMEM168Q9H0V1 697 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 TMEM245Q9H330 911 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 NDUFAF1Q9Y375 327 aa12.27□□□□□ -0.45
DFFB-202ENST00000339350 C5orf42Q9H799 3197 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 PIPSLA2A3N6 862 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 HNRNPCL2B2RXH8 293 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 WWP2O00308 870 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 F9P00740 461 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 CHRM5P08912 532 aaPredicted RBP12.26□□□□□ -0.45
DFFB-202ENST00000339350 GRB14Q14449 540 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 OR4D1Q15615 310 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 INTS6LQ5JSJ4 861 aaKnown RBP12.26□□□□□ -0.45
DFFB-202ENST00000339350 LAIR2Q6ISS4 152 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 LIMS2Q7Z4I7 341 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 CILP2Q8IUL8 1156 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 CLEC4FQ8N1N0 589 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 ATAD1Q8NBU5 361 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 TRPV3Q8NET8 790 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 PHOSPHO2Q8TCD6 241 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 BLOC1S5Q8TDH9 187 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 UFD1Q92890 307 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 TMCO6Q96DC7 493 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 SGTBQ96EQ0 304 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 MYRFLQ96LU7 910 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 C1QTNF6Q9BXI9 259 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 NUSAP1Q9BXS6 441 aaKnown RBP12.26□□□□□ -0.45
DFFB-202ENST00000339350 HPF1Q9NWY4 346 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 TRPM5Q9NZQ8 1165 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 ERVK-18Q9QC07 812 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 FAM50BQ9Y247 325 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 SLC1A7O00341 560 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 FTH1P02794 183 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 OR4Q2P0C623 313 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 HLA-FP30511 346 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 PRKCDQ05655 676 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 NFYCQ13952 458 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 TAB1Q15750 504 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 AAK1Q2M2I8 961 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 PAGE3Q5JUK9 113 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 IRAK1BP1Q5VVH5 260 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 SPRYD7Q5W111 196 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 CIR1Q86X95 450 aaPredicted RBP12.26□□□□□ -0.45
DFFB-202ENST00000339350 UBXN10Q96LJ8 280 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 NELL2Q99435 816 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 ANKHQ9HCJ1 492 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 LAMP5Q9UJQ1 280 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 INTS6Q9UL03 887 aaKnown RBP12.26□□□□□ -0.45
DFFB-202ENST00000339350 ARL5AQ9Y689 179 aa12.26□□□□□ -0.45
DFFB-202ENST00000339350 A0A1W2PRQ8 180 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 UBA6A0AVT1 1052 aaPredicted RBP12.25□□□□□ -0.45
DFFB-202ENST00000339350 LOC110117498-PIK3R3F6TDL0 507 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 POMCP01189 267 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 HAPLN1P10915 354 aaPredicted RBP12.25□□□□□ -0.45
DFFB-202ENST00000339350 RAB3AP20336 220 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 PTX3P26022 381 aaPredicted RBP12.25□□□□□ -0.45
DFFB-202ENST00000339350 GPC1P35052 558 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 SCN4AP35499 1836 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 HNF4AP41235 474 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 DGKQP52824 942 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 AIF1P55008 147 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 GABARAPL2P60520 117 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 ACY1Q03154 408 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 TIGD5Q53EQ6 642 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 RAB41Q5JT25 222 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 ZNF425Q6IV72 752 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 C8orf82Q6P1X6 216 aaPredicted RBP12.25□□□□□ -0.45
DFFB-202ENST00000339350 RBM23Q86U06 439 aaKnown RBP12.25□□□□□ -0.45
DFFB-202ENST00000339350 MIER2Q8N344 545 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 OR13C4Q8NGS5 318 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 OR8K5Q8NH50 307 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 LRRC58Q96CX6 371 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 SMARCD1Q96GM5 515 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 ZIC5Q96T25 663 aa12.25□□□□□ -0.45
DFFB-202ENST00000339350 ACOX2Q99424 681 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms