RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 TCEAL3Q969E4 200 aa14.01□□□□□ -0.17
NIPAL3-202ENST00000339255 UBE2E3Q969T4 207 aa14.01□□□□□ -0.17
NIPAL3-202ENST00000339255 CDK15Q96Q40 435 aa14.01□□□□□ -0.17
NIPAL3-202ENST00000339255 ELAC2Q9BQ52 826 aaKnown RBP14.01□□□□□ -0.17
NIPAL3-202ENST00000339255 TNFRSF12AQ9NP84 129 aa14.01□□□□□ -0.17
NIPAL3-202ENST00000339255 PADI4Q9UM07 663 aa14.01□□□□□ -0.17
NIPAL3-202ENST00000339255 SNX6Q9UNH7 406 aa14.01□□□□□ -0.17
NIPAL3-202ENST00000339255 RNF11Q9Y3C5 154 aa14.01□□□□□ -0.17
NIPAL3-202ENST00000339255 PCDHGA11Q9Y5H2 935 aa14.01□□□□□ -0.17
NIPAL3-202ENST00000339255 DNAJC15Q9Y5T4 150 aa14.01□□□□□ -0.17
NIPAL3-202ENST00000339255 MDC1Q14676 2089 aaKnown RBP14.01□□□□□ -0.17
NIPAL3-202ENST00000339255 ASCC3Q8N3C0 2202 aaKnown RBP14.01□□□□□ -0.17
NIPAL3-202ENST00000339255 A0A0G2JND7 137 aa14.01□□□□□ -0.17
NIPAL3-202ENST00000339255 ISM1B1AKI9 464 aa14.01□□□□□ -0.17
NIPAL3-202ENST00000339255 H0YIV9 168 aa14.01□□□□□ -0.17
NIPAL3-202ENST00000339255 BTN3A3O00478 584 aa14.01□□□□□ -0.17
NIPAL3-202ENST00000339255 TRIM38O00635 465 aa14.01□□□□□ -0.17
NIPAL3-202ENST00000339255 FOXD2O60548 495 aaPredicted RBP14.01□□□□□ -0.17
NIPAL3-202ENST00000339255 CCR8P51685 355 aa14.01□□□□□ -0.17
NIPAL3-202ENST00000339255 AQP5P55064 265 aa14.01□□□□□ -0.17
NIPAL3-202ENST00000339255 INHBCP55103 352 aa14.01□□□□□ -0.17
NIPAL3-202ENST00000339255 UGT3A2Q3SY77 523 aa14.01□□□□□ -0.17
NIPAL3-202ENST00000339255 KRT78Q8N1N4 520 aa14.01□□□□□ -0.17
NIPAL3-202ENST00000339255 DCBLD1Q8N8Z6 715 aa14.01□□□□□ -0.17
NIPAL3-202ENST00000339255 OR10G6Q8NH81 332 aa14.01□□□□□ -0.17
NIPAL3-202ENST00000339255 JPH3Q8WXH2 748 aaPredicted RBP14.01□□□□□ -0.17
NIPAL3-202ENST00000339255 PLCD4Q9BRC7 762 aa14.01□□□□□ -0.17
NIPAL3-202ENST00000339255 SMOC1Q9H4F8 434 aa14.01□□□□□ -0.17
NIPAL3-202ENST00000339255 MRPS30Q9NP92 439 aaKnown RBP14.01□□□□□ -0.17
NIPAL3-202ENST00000339255 HRASLS2Q9NWW9 162 aa14.01□□□□□ -0.17
NIPAL3-202ENST00000339255 ACTR10Q9NZ32 417 aa14.01□□□□□ -0.17
NIPAL3-202ENST00000339255 LRIT1Q9P2V4 623 aa14.01□□□□□ -0.17
NIPAL3-202ENST00000339255 RNF215Q9Y6U7 377 aa14.01□□□□□ -0.17
NIPAL3-202ENST00000339255 GSAPA4D1B5 854 aa14□□□□□ -0.17
NIPAL3-202ENST00000339255 SLC34A2O95436 690 aa14□□□□□ -0.17
NIPAL3-202ENST00000339255 CDH1P12830 882 aa14□□□□□ -0.17
NIPAL3-202ENST00000339255 PSMB5P28074 263 aa14□□□□□ -0.17
NIPAL3-202ENST00000339255 PEBP1P30086 187 aaKnown RBP14□□□□□ -0.17
NIPAL3-202ENST00000339255 GRK6P43250 576 aa14□□□□□ -0.17
NIPAL3-202ENST00000339255 FOXA1P55317 472 aa14□□□□□ -0.17
NIPAL3-202ENST00000339255 GPLD1P80108 840 aa14□□□□□ -0.17
NIPAL3-202ENST00000339255 SLC14A1Q13336 389 aa14□□□□□ -0.17
NIPAL3-202ENST00000339255 CPSF6Q16630 551 aaKnown RBP eCLIP14□□□□□ -0.17
NIPAL3-202ENST00000339255 HIST2H2ACQ16777 129 aaPredicted RBP14□□□□□ -0.17
NIPAL3-202ENST00000339255 SLC5A12Q1EHB4 618 aa14□□□□□ -0.17
NIPAL3-202ENST00000339255 HIST2H2AA3Q6FI13 130 aa14□□□□□ -0.17
NIPAL3-202ENST00000339255 SPESP1Q6UW49 350 aa14□□□□□ -0.17
NIPAL3-202ENST00000339255 TBC1D19Q8N5T2 526 aa14□□□□□ -0.17
NIPAL3-202ENST00000339255 ANKS4BQ8N8V4 417 aa14□□□□□ -0.17
NIPAL3-202ENST00000339255 OR4K1Q8NGD4 311 aa14□□□□□ -0.17
NIPAL3-202ENST00000339255 OR2I1PQ8NGU4 316 aa14□□□□□ -0.17
NIPAL3-202ENST00000339255 ZNF473Q8WTR7 871 aaKnown RBP14□□□□□ -0.17
NIPAL3-202ENST00000339255 TWIST2Q8WVJ9 160 aa14□□□□□ -0.17
NIPAL3-202ENST00000339255 CCT6BQ92526 530 aa14□□□□□ -0.17
NIPAL3-202ENST00000339255 C19orf60Q96EN9 201 aa14□□□□□ -0.17
NIPAL3-202ENST00000339255 APOLD1Q96LR9 279 aa14□□□□□ -0.17
NIPAL3-202ENST00000339255 KCNA7Q96RP8 456 aa14□□□□□ -0.17
NIPAL3-202ENST00000339255 NRTNQ99748 197 aa14□□□□□ -0.17
NIPAL3-202ENST00000339255 AIF1LQ9BQI0 150 aa14□□□□□ -0.17
NIPAL3-202ENST00000339255 RAB33BQ9H082 229 aa14□□□□□ -0.17
NIPAL3-202ENST00000339255 ELOVL6Q9H5J4 265 aa14□□□□□ -0.17
NIPAL3-202ENST00000339255 RABEP2Q9H5N1 569 aa14□□□□□ -0.17
NIPAL3-202ENST00000339255 MEAF6Q9HAF1 191 aa14□□□□□ -0.17
NIPAL3-202ENST00000339255 SPHK1Q9NYA1 384 aa14□□□□□ -0.17
NIPAL3-202ENST00000339255 ANKMY1Q9P2S6 941 aa14□□□□□ -0.17
NIPAL3-202ENST00000339255 DCTN4Q9UJW0 460 aa14□□□□□ -0.17
NIPAL3-202ENST00000339255 SNX7Q9UNH6 387 aa14□□□□□ -0.17
NIPAL3-202ENST00000339255 SH2B3Q9UQQ2 575 aa14□□□□□ -0.17
NIPAL3-202ENST00000339255 APOBEC2Q9Y235 224 aaKnown RBP14□□□□□ -0.17
NIPAL3-202ENST00000339255 FIS1Q9Y3D6 152 aa14□□□□□ -0.17
NIPAL3-202ENST00000339255 TSC22D4Q9Y3Q8 395 aa14□□□□□ -0.17
NIPAL3-202ENST00000339255 EP300Q09472 2414 aaPredicted RBP14□□□□□ -0.17
NIPAL3-202ENST00000339255 DNAH14Q0VDD8 3507 aa13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 FRYLO94915 3013 aa13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 KCNE1BA0A087WTH5 132 aa13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 ZNF195O14628 629 aa13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 FLRT2O43155 660 aa13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 SIGLEC6O43699 453 aa13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 PRAMEF4O60810 478 aa13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 VPS4BO75351 444 aa13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 ULK1O75385 1050 aa13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 LMNAP02545 664 aaKnown RBP13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 PROS1P07225 676 aa13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 UGT2B7P16662 529 aa13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 AMD1P17707 334 aa13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 POLR2CP19387 275 aaPredicted RBP13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 SERPINB1P30740 379 aa13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 GRK3P35626 688 aa13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 IFT88Q13099 833 aa13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 TERF2Q15554 542 aa13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 ZRSR2Q15696 482 aaKnown RBP13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 PDCD2Q16342 344 aaPredicted RBP13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 PRAMEF9Q5VWM5 478 aa13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 FRG2Q64ET8 278 aa13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 MED27Q6P2C8 311 aa13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 EPGNQ6UW88 154 aa13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 ZNF761Q86XN6 746 aaPredicted RBP13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 RFWD2Q8NHY2 731 aa13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 FRG2BQ96QU4 278 aa13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 OR2A14Q96R47 310 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms