RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 CACNB4O00305 520 aaPredicted RBP21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 AKAP10O43572 662 aa21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 C1GALT1C1LP0DN25 315 aa21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 GSK3BP49841 420 aa21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 CLDN8P56748 225 aa21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 RPS13P62277 151 aaKnown RBP21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 PHC1P78364 1004 aa21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 LIPEQ05469 1076 aa21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 PCDH1Q08174 1060 aa21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 TRAP1Q12931 704 aaKnown RBP21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 MAPKAPK3Q16644 382 aa21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 PRAMEF14Q5SWL7 426 aa21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 PRAMEF13Q5VWM6 474 aa21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 GPR156Q8NFN8 814 aa21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 OR52E6Q96RD3 313 aa21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 FERD3LQ96RJ6 166 aa21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 PHF7Q9BWX1 381 aaPredicted RBP21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 ALG2Q9H553 416 aa21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 COPS7BQ9H9Q2 264 aaPredicted RBP21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 PPT2Q9UMR5 302 aa21.65■■□□□ 1.06
PDLIM2-203ENST00000339162 OR52A4PA6NMU1 304 aa21.64■■□□□ 1.06
PDLIM2-203ENST00000339162 PRPS2P11908 318 aa21.64■■□□□ 1.06
PDLIM2-203ENST00000339162 CDH1P12830 882 aa21.64■■□□□ 1.06
PDLIM2-203ENST00000339162 ATP6V1B2P21281 511 aa21.64■■□□□ 1.06
PDLIM2-203ENST00000339162 MLF2Q15773 248 aaPredicted RBP21.64■■□□□ 1.06
PDLIM2-203ENST00000339162 HID1Q8IV36 788 aa21.64■■□□□ 1.06
PDLIM2-203ENST00000339162 GLB1L3Q8NCI6 653 aaPredicted RBP21.64■■□□□ 1.06
PDLIM2-203ENST00000339162 GTF2H4Q92759 462 aa21.64■■□□□ 1.06
PDLIM2-203ENST00000339162 TRIT1Q9H3H1 467 aaKnown RBP21.64■■□□□ 1.06
PDLIM2-203ENST00000339162 VAPAQ9P0L0 249 aa21.64■■□□□ 1.06
PDLIM2-203ENST00000339162 ACSL5Q9ULC5 683 aa21.64■■□□□ 1.06
PDLIM2-203ENST00000339162 MMP17Q9ULZ9 603 aa21.64■■□□□ 1.06
PDLIM2-203ENST00000339162 TMED5Q9Y3A6 229 aa21.64■■□□□ 1.06
PDLIM2-203ENST00000339162 PRAMEF33A0A0G2JMD5 474 aa21.64■■□□□ 1.05
PDLIM2-203ENST00000339162 SOX1O00570 391 aaPredicted RBP21.64■■□□□ 1.05
PDLIM2-203ENST00000339162 PI15O43692 258 aa21.64■■□□□ 1.05
PDLIM2-203ENST00000339162 DFNA5O60443 496 aa21.64■■□□□ 1.05
PDLIM2-203ENST00000339162 IL6P05231 212 aa21.64■■□□□ 1.05
PDLIM2-203ENST00000339162 PSMB5P28074 263 aa21.64■■□□□ 1.05
PDLIM2-203ENST00000339162 PEX2P28328 305 aa21.64■■□□□ 1.05
PDLIM2-203ENST00000339162 GRIA3P42263 894 aa21.64■■□□□ 1.05
PDLIM2-203ENST00000339162 CLCA4Q14CN2 919 aa21.64■■□□□ 1.05
PDLIM2-203ENST00000339162 TRIP10Q15642 601 aa21.64■■□□□ 1.05
PDLIM2-203ENST00000339162 PGS1Q32NB8 556 aa21.64■■□□□ 1.05
PDLIM2-203ENST00000339162 TPRG1LQ5T0D9 272 aa21.64■■□□□ 1.05
PDLIM2-203ENST00000339162 ATG9BQ674R7 924 aa21.64■■□□□ 1.05
PDLIM2-203ENST00000339162 CAPRIN2Q6IMN6 1127 aaKnown RBP21.64■■□□□ 1.05
PDLIM2-203ENST00000339162 NXPE4Q6UWF7 544 aa21.64■■□□□ 1.05
PDLIM2-203ENST00000339162 ANKRD46Q86W74 232 aa21.64■■□□□ 1.05
PDLIM2-203ENST00000339162 PGBD3Q8N328 593 aa21.64■■□□□ 1.05
PDLIM2-203ENST00000339162 CGREF1Q99674 301 aa21.64■■□□□ 1.05
PDLIM2-203ENST00000339162 TAC3Q9UHF0 121 aa21.64■■□□□ 1.05
PDLIM2-203ENST00000339162 PIPSLA2A3N6 862 aa21.63■■□□□ 1.05
PDLIM2-203ENST00000339162 HSD17B1P14061 328 aa21.63■■□□□ 1.05
PDLIM2-203ENST00000339162 ACSM2AQ08AH3 577 aa21.63■■□□□ 1.05
PDLIM2-203ENST00000339162 PWP1Q13610 501 aa21.63■■□□□ 1.05
PDLIM2-203ENST00000339162 E2F2Q14209 437 aa21.63■■□□□ 1.05
PDLIM2-203ENST00000339162 ACSM2BQ68CK6 577 aa21.63■■□□□ 1.05
PDLIM2-203ENST00000339162 RD3Q7Z3Z2 195 aa21.63■■□□□ 1.05
PDLIM2-203ENST00000339162 SPPL2CQ8IUH8 684 aa21.63■■□□□ 1.05
PDLIM2-203ENST00000339162 LILRA2Q8N149 483 aa21.63■■□□□ 1.05
PDLIM2-203ENST00000339162 PQLC1Q8N2U9 271 aa21.63■■□□□ 1.05
PDLIM2-203ENST00000339162 C1orf52Q8N6N3 182 aaKnown RBP21.63■■□□□ 1.05
PDLIM2-203ENST00000339162 MENTQ9BUN1 341 aa21.63■■□□□ 1.05
PDLIM2-203ENST00000339162 CAAP1Q9H8G2 361 aa21.63■■□□□ 1.05
PDLIM2-203ENST00000339162 CARS2Q9HA77 564 aaKnown RBP21.63■■□□□ 1.05
PDLIM2-203ENST00000339162 PRDM8Q9NQV8 689 aa21.63■■□□□ 1.05
PDLIM2-203ENST00000339162 EBF1Q9UH73 591 aa21.63■■□□□ 1.05
PDLIM2-203ENST00000339162 NEUROG3Q9Y4Z2 214 aa21.63■■□□□ 1.05
PDLIM2-203ENST00000339162 NPIPB8E9PQR5 432 aa21.63■■□□□ 1.05
PDLIM2-203ENST00000339162 SAP18O00422 153 aaKnown RBP21.63■■□□□ 1.05
PDLIM2-203ENST00000339162 KCNH1O95259 989 aa21.63■■□□□ 1.05
PDLIM2-203ENST00000339162 NCK1P16333 377 aa21.63■■□□□ 1.05
PDLIM2-203ENST00000339162 MAPK1P28482 360 aa21.63■■□□□ 1.05
PDLIM2-203ENST00000339162 DMPKQ09013 629 aa21.63■■□□□ 1.05
PDLIM2-203ENST00000339162 SYT12Q8IV01 421 aa21.63■■□□□ 1.05
PDLIM2-203ENST00000339162 PDXPQ96GD0 296 aa21.63■■□□□ 1.05
PDLIM2-203ENST00000339162 LRGUKQ96M69 825 aa21.63■■□□□ 1.05
PDLIM2-203ENST00000339162 KCTD14Q9BQ13 255 aaPredicted RBP21.63■■□□□ 1.05
PDLIM2-203ENST00000339162 XKR8Q9H6D3 395 aa21.63■■□□□ 1.05
PDLIM2-203ENST00000339162 SLC6A13Q9NSD5 602 aa21.63■■□□□ 1.05
PDLIM2-203ENST00000339162 PDZK1P1A8MUH7 402 aa21.62■■□□□ 1.05
PDLIM2-203ENST00000339162 TGFB1P01137 390 aa21.62■■□□□ 1.05
PDLIM2-203ENST00000339162 RPN2P04844 631 aa21.62■■□□□ 1.05
PDLIM2-203ENST00000339162 MTHFD1P11586 935 aaKnown RBP21.62■■□□□ 1.05
PDLIM2-203ENST00000339162 RHDQ02161 417 aa21.62■■□□□ 1.05
PDLIM2-203ENST00000339162 GTDC1Q4AE62 458 aa21.62■■□□□ 1.05
PDLIM2-203ENST00000339162 FBXO43Q4G163 708 aa21.62■■□□□ 1.05
PDLIM2-203ENST00000339162 ENPP7Q6UWV6 458 aa21.62■■□□□ 1.05
PDLIM2-203ENST00000339162 IZUMO2Q6UXV1 221 aa21.62■■□□□ 1.05
PDLIM2-203ENST00000339162 FAM110BQ8TC76 370 aa21.62■■□□□ 1.05
PDLIM2-203ENST00000339162 SH3KBP1Q96B97 665 aa21.62■■□□□ 1.05
PDLIM2-203ENST00000339162 TIMM29Q9BSF4 260 aa21.62■■□□□ 1.05
PDLIM2-203ENST00000339162 EFCAB11Q9BUY7 163 aa21.62■■□□□ 1.05
PDLIM2-203ENST00000339162 ZNF839A8K0R7 811 aa21.61■■□□□ 1.05
PDLIM2-203ENST00000339162 NPPAP01160 153 aa21.61■■□□□ 1.05
PDLIM2-203ENST00000339162 ZFP1Q6P2D0 407 aa21.61■■□□□ 1.05
PDLIM2-203ENST00000339162 TBC1D21Q8IYX1 336 aa21.61■■□□□ 1.05
PDLIM2-203ENST00000339162 WDR34Q96EX3 536 aa21.61■■□□□ 1.05
PDLIM2-203ENST00000339162 BRF2Q9HAW0 419 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms