RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 POMGNT2Q8NAT1 580 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 RDM1Q8NG50 284 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 OR2L3Q8NG85 312 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 TERB2Q8NHR7 220 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 CDKN2AIPNLQ96HQ2 116 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 NT5C1BQ96P26 610 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 S100A13Q99584 98 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 VRK1Q99986 396 aaPredicted RBP4.05□□□□□ -1.76
NEDD4-201ENST00000338963 PIGMQ9H3S5 423 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 ANKEF1Q9NU02 776 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 TMLHEQ9NVH6 421 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 C14orf105Q9NVL8 296 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 PCDHA8Q9Y5H6 950 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 NUBP2Q9Y5Y2 271 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 A0A1B0GTW7 788 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 OR2A25A4D2G3 310 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 FABP12A6NFH5 140 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 D6RAR5 112 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 ARPC2O15144 300 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 SEC14L5O43304 696 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 LILRB3O75022 631 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 NDUFS6O75380 124 aaKnown RBP4.05□□□□□ -1.76
NEDD4-201ENST00000338963 IFNA17P01571 189 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 IGHV2-70P01814 119 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 MLNP12872 115 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 ANXA11P50995 505 aaKnown RBP4.05□□□□□ -1.76
NEDD4-201ENST00000338963 PKIAP61925 76 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 MC2RQ01718 297 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 GCNT1Q02742 428 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 DGCR6Q14129 220 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 GK2Q14410 553 aaPredicted RBP4.05□□□□□ -1.76
NEDD4-201ENST00000338963 NR6A1Q15406 480 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 TATDN3Q17R31 274 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 KLHL22Q53GT1 634 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 PYDC2Q56P42 97 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 PLBD1Q6P4A8 553 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 C3P1Q6ZMU1 363 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 P4HA3Q7Z4N8 544 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 MAP4K3Q8IVH8 894 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 ABRAQ8N0Z2 381 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 FCRL1Q96LA6 429 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 DUSP26Q9BV47 211 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 STRA6Q9BX79 667 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 ZFP57Q9NU63 452 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 FAM205CA6NFA0 338 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 MARCH11A6NNE9 402 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 CLCA1A8K7I4 914 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 KCNU1A8MYU2 1149 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 AKR7A2O43488 359 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 AQP8O94778 261 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 LRIG2O94898 1065 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 MT-ND1P03886 318 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 MT-ND2P03891 347 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 SLC2A2P11168 524 aaPredicted RBP4.05□□□□□ -1.76
NEDD4-201ENST00000338963 GRIA1P42261 906 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 LSM3P62310 102 aaKnown RBP4.05□□□□□ -1.76
NEDD4-201ENST00000338963 DYNLL1P63167 89 aaKnown RBP4.05□□□□□ -1.76
NEDD4-201ENST00000338963 NHLH2Q02577 135 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 MAD2L1Q13257 205 aaPredicted RBP4.05□□□□□ -1.76
NEDD4-201ENST00000338963 LRRC41Q15345 812 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 HMGN3Q15651 99 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 GXYLT1Q4G148 440 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 MSS51Q4VC12 460 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 C1orf141Q5JVX7 400 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 RAP1GAP2Q684P5 730 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 PLA2G4FQ68DD2 849 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 SH2D5Q6ZV89 423 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 NUDT18Q6ZVK8 323 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 PDZD4Q76G19 769 aaPredicted RBP4.05□□□□□ -1.76
NEDD4-201ENST00000338963 PIWIL4Q7Z3Z4 852 aaKnown RBP4.05□□□□□ -1.76
NEDD4-201ENST00000338963 MCEMP1Q8IX19 187 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 OR56A4Q8NGH8 313 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 OR56B2PQ8NGI1 322 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 GLYATL2Q8WU03 294 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 KLHL15Q96M94 604 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 CAMK1GQ96NX5 476 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 CYP2S1Q96SQ9 504 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 TNKS2Q9H2K2 1166 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 OGDHLQ9ULD0 1010 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 PCDHGA9Q9Y5G4 932 aaKnown RBP4.05□□□□□ -1.76
NEDD4-201ENST00000338963 A8MV72 311 aaPredicted RBP4.05□□□□□ -1.76
NEDD4-201ENST00000338963 GRID2O43424 1007 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 GPRIN2O60269 458 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 FADS2O95864 444 aaKnown RBP4.05□□□□□ -1.76
NEDD4-201ENST00000338963 ARSBP15848 533 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 HSD3B2P26439 372 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 SSTR1P30872 391 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 CD86P42081 329 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 CDKN2CP42773 168 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 KLF1Q13351 362 aaPredicted RBP4.05□□□□□ -1.76
NEDD4-201ENST00000338963 IMPG1Q17R60 797 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 VPS26BQ4G0F5 336 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 DCXRQ7Z4W1 244 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 MILR1Q7Z6M3 343 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 OR4M1Q8NGD0 313 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 PLBD2Q8NHP8 589 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 PCDHB18PQ96TA0 734 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 CPNE1Q99829 537 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 TEX101Q9BY14 249 aa4.05□□□□□ -1.76
NEDD4-201ENST00000338963 OPN3Q9H1Y3 402 aaPredicted RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms