RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 POT1Q9NUX5 634 aa14.22□□□□□ -0.13
CDK5RAP3-201ENST00000338399 CUEDC1Q9NWM3 386 aaPredicted RBP14.22□□□□□ -0.13
CDK5RAP3-201ENST00000338399 SPHK1Q9NYA1 384 aa14.22□□□□□ -0.13
CDK5RAP3-201ENST00000338399 PCDHB11Q9Y5F2 797 aa14.22□□□□□ -0.13
CDK5RAP3-201ENST00000338399 PCDHGA11Q9Y5H2 935 aa14.22□□□□□ -0.13
CDK5RAP3-201ENST00000338399 SNRNP200O75643 2136 aaKnown RBP14.21□□□□□ -0.13
CDK5RAP3-201ENST00000338399 PIPSLA2A3N6 862 aa14.21□□□□□ -0.13
CDK5RAP3-201ENST00000338399 YY2O15391 372 aa14.21□□□□□ -0.13
CDK5RAP3-201ENST00000338399 AQP9O43315 295 aa14.21□□□□□ -0.13
CDK5RAP3-201ENST00000338399 PRICKLE3O43900 615 aaPredicted RBP14.21□□□□□ -0.13
CDK5RAP3-201ENST00000338399 ESRRAP11474 423 aaPredicted RBP14.21□□□□□ -0.13
CDK5RAP3-201ENST00000338399 PCNAP12004 261 aa14.21□□□□□ -0.13
CDK5RAP3-201ENST00000338399 GNSP15586 552 aa14.21□□□□□ -0.13
CDK5RAP3-201ENST00000338399 CD1EP15812 388 aa14.21□□□□□ -0.13
CDK5RAP3-201ENST00000338399 PIK3R1P27986 724 aa14.21□□□□□ -0.13
CDK5RAP3-201ENST00000338399 PEBP1P30086 187 aaKnown RBP14.21□□□□□ -0.13
CDK5RAP3-201ENST00000338399 NCALDP61601 193 aa14.21□□□□□ -0.13
CDK5RAP3-201ENST00000338399 ERVK-8P63133 956 aa14.21□□□□□ -0.13
CDK5RAP3-201ENST00000338399 SQLEQ14534 574 aa14.21□□□□□ -0.13
CDK5RAP3-201ENST00000338399 NAA25Q14CX7 972 aa14.21□□□□□ -0.13
CDK5RAP3-201ENST00000338399 PAGE2BQ5JRK9 111 aa14.21□□□□□ -0.13
CDK5RAP3-201ENST00000338399 ADNP2Q6IQ32 1131 aa14.21□□□□□ -0.13
CDK5RAP3-201ENST00000338399 MED27Q6P2C8 311 aa14.21□□□□□ -0.13
CDK5RAP3-201ENST00000338399 SPATA19Q7Z5L4 167 aa14.21□□□□□ -0.13
CDK5RAP3-201ENST00000338399 FBXL6Q8N531 539 aa14.21□□□□□ -0.13
CDK5RAP3-201ENST00000338399 POU5F2Q8N7G0 328 aa14.21□□□□□ -0.13
CDK5RAP3-201ENST00000338399 ZNF548Q8NEK5 533 aaPredicted RBP14.21□□□□□ -0.13
CDK5RAP3-201ENST00000338399 OR7G3Q8NG95 312 aa14.21□□□□□ -0.13
CDK5RAP3-201ENST00000338399 MTERF1Q99551 399 aaKnown RBP14.21□□□□□ -0.13
CDK5RAP3-201ENST00000338399 PRM3Q9NNZ6 103 aa14.21□□□□□ -0.13
CDK5RAP3-201ENST00000338399 OR6C2Q9NZP2 312 aa14.21□□□□□ -0.13
CDK5RAP3-201ENST00000338399 TAGLN3Q9UI15 199 aa14.21□□□□□ -0.13
CDK5RAP3-201ENST00000338399 SNX11Q9Y5W9 270 aa14.21□□□□□ -0.13
CDK5RAP3-201ENST00000338399 PI4KAP42356 2102 aa14.21□□□□□ -0.13
CDK5RAP3-201ENST00000338399 BDP1A6H8Y1 2624 aa14.21□□□□□ -0.13
CDK5RAP3-201ENST00000338399 H7BY64 318 aa14.21□□□□□ -0.14
CDK5RAP3-201ENST00000338399 BTN3A3O00478 584 aa14.21□□□□□ -0.14
CDK5RAP3-201ENST00000338399 ATP5HO75947 161 aa14.21□□□□□ -0.14
CDK5RAP3-201ENST00000338399 CHRM5P08912 532 aaPredicted RBP14.21□□□□□ -0.14
CDK5RAP3-201ENST00000338399 CPA2P48052 419 aa14.21□□□□□ -0.14
CDK5RAP3-201ENST00000338399 DIO3P55073 304 aa14.21□□□□□ -0.14
CDK5RAP3-201ENST00000338399 PRDX1Q06830 199 aaKnown RBP14.21□□□□□ -0.14
CDK5RAP3-201ENST00000338399 LAPTM5Q13571 262 aa14.21□□□□□ -0.14
CDK5RAP3-201ENST00000338399 HIST2H2ACQ16777 129 aaPredicted RBP14.21□□□□□ -0.14
CDK5RAP3-201ENST00000338399 KIF19Q2TAC6 998 aa14.21□□□□□ -0.14
CDK5RAP3-201ENST00000338399 RFTN2Q52LD8 501 aaPredicted RBP14.21□□□□□ -0.14
CDK5RAP3-201ENST00000338399 HIST2H2AA3Q6FI13 130 aa14.21□□□□□ -0.14
CDK5RAP3-201ENST00000338399 CEP68Q76N32 757 aa14.21□□□□□ -0.14
CDK5RAP3-201ENST00000338399 SLC9B2Q86UD5 537 aa14.21□□□□□ -0.14
CDK5RAP3-201ENST00000338399 FAM129CQ86XR2 697 aa14.21□□□□□ -0.14
CDK5RAP3-201ENST00000338399 FAM20CQ8IXL6 584 aa14.21□□□□□ -0.14
CDK5RAP3-201ENST00000338399 ZNF740Q8NDX6 193 aa14.21□□□□□ -0.14
CDK5RAP3-201ENST00000338399 ZFPM2Q8WW38 1151 aa14.21□□□□□ -0.14
CDK5RAP3-201ENST00000338399 PPP3R2Q96LZ3 170 aa14.21□□□□□ -0.14
CDK5RAP3-201ENST00000338399 PRAP1Q96NZ9 151 aa14.21□□□□□ -0.14
CDK5RAP3-201ENST00000338399 PELI2Q9HAT8 420 aa14.21□□□□□ -0.14
CDK5RAP3-201ENST00000338399 PILRBQ9UKJ0 227 aa14.21□□□□□ -0.14
CDK5RAP3-201ENST00000338399 LOC100653049A0A140TA62 436 aa14.2□□□□□ -0.14
CDK5RAP3-201ENST00000338399 SERTM1A2A2V5 107 aa14.2□□□□□ -0.14
CDK5RAP3-201ENST00000338399 ISM1B1AKI9 464 aa14.2□□□□□ -0.14
CDK5RAP3-201ENST00000338399 SLC22A2O15244 555 aa14.2□□□□□ -0.14
CDK5RAP3-201ENST00000338399 SEC22BO75396 215 aa14.2□□□□□ -0.14
CDK5RAP3-201ENST00000338399 KRT34O76011 436 aa14.2□□□□□ -0.14
CDK5RAP3-201ENST00000338399 CALB2P22676 271 aa14.2□□□□□ -0.14
CDK5RAP3-201ENST00000338399 ADSLP30566 484 aaPredicted RBP14.2□□□□□ -0.14
CDK5RAP3-201ENST00000338399 CTSKP43235 329 aa14.2□□□□□ -0.14
CDK5RAP3-201ENST00000338399 ATP4BP51164 291 aa14.2□□□□□ -0.14
CDK5RAP3-201ENST00000338399 NME5P56597 212 aa14.2□□□□□ -0.14
CDK5RAP3-201ENST00000338399 STX1BP61266 288 aa14.2□□□□□ -0.14
CDK5RAP3-201ENST00000338399 RPL38P63173 70 aaKnown RBP14.2□□□□□ -0.14
CDK5RAP3-201ENST00000338399 BNC1Q01954 994 aa14.2□□□□□ -0.14
CDK5RAP3-201ENST00000338399 HHEXQ03014 270 aa14.2□□□□□ -0.14
CDK5RAP3-201ENST00000338399 SF1Q15637 639 aaKnown RBP14.2□□□□□ -0.14
CDK5RAP3-201ENST00000338399 DEFB133Q30KQ1 61 aa14.2□□□□□ -0.14
CDK5RAP3-201ENST00000338399 ADGRF3Q8IZF5 1079 aa14.2□□□□□ -0.14
CDK5RAP3-201ENST00000338399 ABHD11Q8NFV4 315 aa14.2□□□□□ -0.14
CDK5RAP3-201ENST00000338399 HUS1BQ8NHY5 278 aa14.2□□□□□ -0.14
CDK5RAP3-201ENST00000338399 PIGKQ92643 395 aa14.2□□□□□ -0.14
CDK5RAP3-201ENST00000338399 NELL1Q92832 810 aa14.2□□□□□ -0.14
CDK5RAP3-201ENST00000338399 REPS1Q96D71 796 aa14.2□□□□□ -0.14
CDK5RAP3-201ENST00000338399 LRTM1Q9HBL6 345 aa14.2□□□□□ -0.14
CDK5RAP3-201ENST00000338399 MRPS30Q9NP92 439 aaKnown RBP14.2□□□□□ -0.14
CDK5RAP3-201ENST00000338399 UCKL1Q9NWZ5 548 aa14.2□□□□□ -0.14
CDK5RAP3-201ENST00000338399 PSMD12O00232 456 aaPredicted RBP14.19□□□□□ -0.14
CDK5RAP3-201ENST00000338399 PIAS2O75928 621 aa14.19□□□□□ -0.14
CDK5RAP3-201ENST00000338399 COX4I1P13073 169 aa14.19□□□□□ -0.14
CDK5RAP3-201ENST00000338399 AVPR2P30518 371 aa14.19□□□□□ -0.14
CDK5RAP3-201ENST00000338399 CCR8P51685 355 aa14.19□□□□□ -0.14
CDK5RAP3-201ENST00000338399 MAZP56270 477 aaKnown RBP14.19□□□□□ -0.14
CDK5RAP3-201ENST00000338399 EMX2Q04743 252 aa14.19□□□□□ -0.14
CDK5RAP3-201ENST00000338399 ZNF33BQ06732 778 aa14.19□□□□□ -0.14
CDK5RAP3-201ENST00000338399 RPS6KA2Q15349 733 aa14.19□□□□□ -0.14
CDK5RAP3-201ENST00000338399 GSTA3Q16772 222 aa14.19□□□□□ -0.14
CDK5RAP3-201ENST00000338399 PAOXQ6QHF9 649 aa14.19□□□□□ -0.14
CDK5RAP3-201ENST00000338399 ZNF761Q86XN6 746 aaPredicted RBP14.19□□□□□ -0.14
CDK5RAP3-201ENST00000338399 LAS2Q8IYD9 372 aa14.19□□□□□ -0.14
CDK5RAP3-201ENST00000338399 KRT78Q8N1N4 520 aa14.19□□□□□ -0.14
CDK5RAP3-201ENST00000338399 CMTM5Q96DZ9 223 aa14.19□□□□□ -0.14
CDK5RAP3-201ENST00000338399 AIF1LQ9BQI0 150 aa14.19□□□□□ -0.14
CDK5RAP3-201ENST00000338399 ACTR5Q9H9F9 607 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms