RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 PTPRZ1P23471 2315 aaPredicted RBP8□□□□□ -1.13
HPS4-201ENST00000336873 ZFC3H1O60293 1989 aaKnown RBP8□□□□□ -1.13
HPS4-201ENST00000336873 FXYD1O00168 92 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 LEFTY1O75610 366 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 LCKP06239 509 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 LAMP1P11279 417 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 EPHA2P29317 976 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 MANFP55145 182 aaKnown RBP7.99□□□□□ -1.13
HPS4-201ENST00000336873 RPS13P62277 151 aaKnown RBP7.99□□□□□ -1.13
HPS4-201ENST00000336873 DEFB103AP81534 67 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 TRAF3Q13114 568 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 TJAP1Q5JTD0 557 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 MRPL10Q7Z7H8 261 aaKnown RBP7.99□□□□□ -1.13
HPS4-201ENST00000336873 GATAD2AQ86YP4 633 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 NXPE1Q8N323 547 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 MINDY1Q8N5J2 469 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 SLC15A4Q8N697 577 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 CAPSLQ8WWF8 208 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 TCEAL4Q96EI5 215 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 DNAJA3Q96EY1 480 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 PLEKHA8Q96JA3 519 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 ZNF597Q96LX8 424 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 CLSTN3Q9BQT9 956 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 GPATCH1Q9BRR8 931 aaKnown RBP7.99□□□□□ -1.13
HPS4-201ENST00000336873 TRMT61BQ9BVS5 477 aaKnown RBP7.99□□□□□ -1.13
HPS4-201ENST00000336873 NUAK2Q9H093 628 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 TPT1P8Q9HAU6 139 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 SACM1LQ9NTJ5 587 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 IL20RAQ9UHF4 553 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 SATB2Q9UPW6 733 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 PCDHB1Q9Y5F3 818 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 TCRBV3S1A0A5B6 114 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 TTC34A8MYJ7 566 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 H3BMQ9 156 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 GMFGO60234 142 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 MMP20O60882 483 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 SLC16A8O95907 504 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 CH25HO95992 272 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 PEX11BO96011 259 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 DNTTP04053 509 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 FABP3P05413 133 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 CDH1P12830 882 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 CD36P16671 472 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 CDH3P22223 829 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 PDHA2P29803 388 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 CCR7P32248 378 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 CA5AP35218 305 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 BUD31P41223 144 aaPredicted RBP7.99□□□□□ -1.13
HPS4-201ENST00000336873 RCAN2Q14206 197 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 ZNF554Q86TJ5 538 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 MMAAQ8IVH4 418 aaKnown RBP7.99□□□□□ -1.13
HPS4-201ENST00000336873 CHPFQ8IZ52 775 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 RHEBL1Q8TAI7 183 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 L3HYPDHQ96EM0 354 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 IGSF21Q96ID5 467 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 HSH2DQ96JZ2 352 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 COG8Q96MW5 612 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 CDK5RAP1Q96SZ6 601 aaKnown RBP7.99□□□□□ -1.13
HPS4-201ENST00000336873 RBM4BQ9BQ04 359 aaKnown RBP7.99□□□□□ -1.13
HPS4-201ENST00000336873 MGME1Q9BQP7 344 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 DUSP26Q9BV47 211 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 RBM4Q9BWF3 364 aaKnown RBP7.99□□□□□ -1.13
HPS4-201ENST00000336873 SLC32A1Q9H598 525 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 SLC6A13Q9NSD5 602 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 ZDHHC7Q9NXF8 308 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 TUBA8Q9NY65 449 aaPredicted RBP7.99□□□□□ -1.13
HPS4-201ENST00000336873 A0A096LPI6 279 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 TMEM202A6NGA9 273 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 TNFRSF11BO00300 401 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 CNOT3O75175 753 aaKnown RBP7.99□□□□□ -1.13
HPS4-201ENST00000336873 EPOP01588 193 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 ENO2P09104 434 aaPredicted RBP7.99□□□□□ -1.13
HPS4-201ENST00000336873 ETFAP13804 333 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 TYRP14679 529 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 MAPK1P28482 360 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 GTF2E2P29084 291 aaKnown RBP7.99□□□□□ -1.13
HPS4-201ENST00000336873 C21orf33P30042 268 aaPredicted RBP7.99□□□□□ -1.13
HPS4-201ENST00000336873 CTNNB1P35222 781 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 ALDH3A2P51648 485 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 BMXP51813 675 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 ZNF140P52738 457 aaPredicted RBP7.99□□□□□ -1.13
HPS4-201ENST00000336873 MLLT10P55197 1068 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 POLR2LP62875 67 aaKnown RBP7.99□□□□□ -1.13
HPS4-201ENST00000336873 EMX2Q04743 252 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 ZNF33AQ06730 810 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 CSTF3Q12996 717 aaKnown RBP7.99□□□□□ -1.13
HPS4-201ENST00000336873 RFTN1Q14699 578 aaPredicted RBP7.99□□□□□ -1.13
HPS4-201ENST00000336873 GRIN2CQ14957 1233 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 RNASE12Q5GAN4 147 aaKnown RBP7.99□□□□□ -1.13
HPS4-201ENST00000336873 CLEC12AQ5QGZ9 265 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 CD300LGQ6UXG3 332 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 CYHR1Q6ZMK1 362 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 ZFAND4Q86XD8 727 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 KCT2Q8NC54 265 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 KREMEN2Q8NCW0 462 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 FLCNQ8NFG4 579 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 ARSGQ96EG1 525 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 P2RY13Q9BPV8 354 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 FUNDC2Q9BWH2 189 aa7.99□□□□□ -1.13
HPS4-201ENST00000336873 PRRG3Q9BZD7 231 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms