RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 CAPNS2Q96L46 248 aa17.66■□□□□ 0.42
PKP3-201ENST00000331563 NXF2Q9GZY0 626 aaKnown RBP17.66■□□□□ 0.42
PKP3-201ENST00000331563 MFSD1Q9H3U5 465 aa17.66■□□□□ 0.42
PKP3-201ENST00000331563 SCPEP1Q9HB40 452 aa17.66■□□□□ 0.42
PKP3-201ENST00000331563 TMLHEQ9NVH6 421 aa17.66■□□□□ 0.42
PKP3-201ENST00000331563 A0A0U1RQS6 177 aa17.65■□□□□ 0.42
PKP3-201ENST00000331563 BTN3A1O00481 513 aa17.65■□□□□ 0.42
PKP3-201ENST00000331563 PCDHGA12O60330 932 aa17.65■□□□□ 0.42
PKP3-201ENST00000331563 PDGFAP04085 211 aa17.65■□□□□ 0.42
PKP3-201ENST00000331563 TRAPPC2P0DI81 140 aa17.65■□□□□ 0.42
PKP3-201ENST00000331563 TRAPPC2BP0DI82 140 aa17.65■□□□□ 0.42
PKP3-201ENST00000331563 CD86P42081 329 aa17.65■□□□□ 0.42
PKP3-201ENST00000331563 BNC1Q01954 994 aa17.65■□□□□ 0.42
PKP3-201ENST00000331563 AP5B1Q2VPB7 878 aa17.65■□□□□ 0.42
PKP3-201ENST00000331563 SHEQ5VZ18 495 aa17.65■□□□□ 0.42
PKP3-201ENST00000331563 TRIM48Q8IWZ4 208 aa17.65■□□□□ 0.42
PKP3-201ENST00000331563 SDHCQ99643 169 aaPredicted RBP17.65■□□□□ 0.42
PKP3-201ENST00000331563 NT5MQ9NPB1 228 aa17.65■□□□□ 0.42
PKP3-201ENST00000331563 GLTPQ9NZD2 209 aa17.65■□□□□ 0.42
PKP3-201ENST00000331563 TNFRSF10DQ9UBN6 386 aa17.65■□□□□ 0.42
PKP3-201ENST00000331563 EIF2B4Q9UI10 523 aaKnown RBP17.65■□□□□ 0.42
PKP3-201ENST00000331563 NPEPPSL1A6NEC2 478 aa17.65■□□□□ 0.42
PKP3-201ENST00000331563 GRXCR2A6NFK2 248 aa17.65■□□□□ 0.42
PKP3-201ENST00000331563 ANKRD28O15084 1053 aa17.65■□□□□ 0.42
PKP3-201ENST00000331563 F9P00740 461 aa17.65■□□□□ 0.42
PKP3-201ENST00000331563 OR4Q2P0C623 313 aa17.65■□□□□ 0.42
PKP3-201ENST00000331563 COL6A1P12109 1028 aa17.65■□□□□ 0.42
PKP3-201ENST00000331563 MLLT3P42568 568 aaPredicted RBP17.65■□□□□ 0.42
PKP3-201ENST00000331563 DAOAP59103 153 aa17.65■□□□□ 0.42
PKP3-201ENST00000331563 RPP38P78345 283 aaKnown RBP17.65■□□□□ 0.42
PKP3-201ENST00000331563 GTDC1Q4AE62 458 aa17.65■□□□□ 0.42
PKP3-201ENST00000331563 ZNF767PQ75MW2 155 aa17.65■□□□□ 0.42
PKP3-201ENST00000331563 SLC46A3Q7Z3Q1 461 aa17.65■□□□□ 0.42
PKP3-201ENST00000331563 KLHDC8BQ8IXV7 354 aa17.65■□□□□ 0.42
PKP3-201ENST00000331563 ZNF675Q8TD23 568 aa17.65■□□□□ 0.42
PKP3-201ENST00000331563 PPP1R2P1Q96PQ5 205 aa17.65■□□□□ 0.42
PKP3-201ENST00000331563 MYLKQ15746 1914 aa17.64■□□□□ 0.41
PKP3-201ENST00000331563 CCDC182A6NF36 153 aa17.64■□□□□ 0.41
PKP3-201ENST00000331563 CD3EAPO15446 510 aaKnown RBP17.64■□□□□ 0.41
PKP3-201ENST00000331563 MRPS14O60783 128 aaKnown RBP17.64■□□□□ 0.41
PKP3-201ENST00000331563 SLC2A4P14672 509 aa17.64■□□□□ 0.41
PKP3-201ENST00000331563 FOSL1P15407 271 aa17.64■□□□□ 0.41
PKP3-201ENST00000331563 EFNA1P20827 205 aaPredicted RBP17.64■□□□□ 0.41
PKP3-201ENST00000331563 MRPL19P49406 292 aaKnown RBP17.64■□□□□ 0.41
PKP3-201ENST00000331563 ACLYP53396 1101 aa17.64■□□□□ 0.41
PKP3-201ENST00000331563 PTGR1Q14914 329 aa17.64■□□□□ 0.41
PKP3-201ENST00000331563 METTL2BQ6P1Q9 378 aaKnown RBP17.64■□□□□ 0.41
PKP3-201ENST00000331563 LRRTM3Q86VH5 581 aa17.64■□□□□ 0.41
PKP3-201ENST00000331563 CYP4Z2PQ8N1L4 340 aa17.64■□□□□ 0.41
PKP3-201ENST00000331563 ZFAND1Q8TCF1 268 aa17.64■□□□□ 0.41
PKP3-201ENST00000331563 KIAA1191Q96A73 305 aa17.64■□□□□ 0.41
PKP3-201ENST00000331563 DACT3Q96B18 629 aaPredicted RBP17.64■□□□□ 0.41
PKP3-201ENST00000331563 FERD3LQ96RJ6 166 aa17.64■□□□□ 0.41
PKP3-201ENST00000331563 RTP3Q9BQQ7 232 aa17.64■□□□□ 0.41
PKP3-201ENST00000331563 ACTL8Q9H568 366 aa17.64■□□□□ 0.41
PKP3-201ENST00000331563 ZNF556Q9HAH1 456 aa17.64■□□□□ 0.41
PKP3-201ENST00000331563 NDRG4Q9ULP0 352 aaKnown RBP17.64■□□□□ 0.41
PKP3-201ENST00000331563 ABCG2Q9UNQ0 655 aa17.64■□□□□ 0.41
PKP3-201ENST00000331563 WBP4O75554 376 aaKnown RBP17.64■□□□□ 0.41
PKP3-201ENST00000331563 TALDO1P37837 337 aa17.64■□□□□ 0.41
PKP3-201ENST00000331563 HTR6P50406 440 aa17.64■□□□□ 0.41
PKP3-201ENST00000331563 MRNIPQ6NTE8 343 aa17.64■□□□□ 0.41
PKP3-201ENST00000331563 GPR149Q86SP6 731 aa17.64■□□□□ 0.41
PKP3-201ENST00000331563 CCDC190Q86UF4 302 aa17.64■□□□□ 0.41
PKP3-201ENST00000331563 RTN4RL1Q86UN2 441 aaPredicted RBP17.64■□□□□ 0.41
PKP3-201ENST00000331563 ZNF280BQ86YH2 543 aa17.64■□□□□ 0.41
PKP3-201ENST00000331563 ARHGAP12Q8IWW6 846 aa17.64■□□□□ 0.41
PKP3-201ENST00000331563 OR52B6Q8NGF0 335 aa17.64■□□□□ 0.41
PKP3-201ENST00000331563 SLC7A6Q92536 515 aa17.64■□□□□ 0.41
PKP3-201ENST00000331563 UCK2Q9BZX2 261 aa17.64■□□□□ 0.41
PKP3-201ENST00000331563 MAGIXQ9H6Y5 334 aa17.64■□□□□ 0.41
PKP3-201ENST00000331563 CD274Q9NZQ7 290 aa17.64■□□□□ 0.41
PKP3-201ENST00000331563 EIF3KQ9UBQ5 218 aaKnown RBP17.64■□□□□ 0.41
PKP3-201ENST00000331563 SAMHD1Q9Y3Z3 626 aaKnown RBP17.64■□□□□ 0.41
PKP3-201ENST00000331563 ARPC4-TTLL3A0A0A6YYG9 625 aa17.63■□□□□ 0.41
PKP3-201ENST00000331563 RETP07949 1114 aa17.63■□□□□ 0.41
PKP3-201ENST00000331563 RPS17P08708 135 aaKnown RBP17.63■□□□□ 0.41
PKP3-201ENST00000331563 TNFSF8P32971 234 aa17.63■□□□□ 0.41
PKP3-201ENST00000331563 TIE1P35590 1138 aa17.63■□□□□ 0.41
PKP3-201ENST00000331563 NUDT6P53370 316 aa17.63■□□□□ 0.41
PKP3-201ENST00000331563 MAPK12P53778 367 aa17.63■□□□□ 0.41
PKP3-201ENST00000331563 RHAGQ02094 409 aa17.63■□□□□ 0.41
PKP3-201ENST00000331563 ZNF33AQ06730 810 aa17.63■□□□□ 0.41
PKP3-201ENST00000331563 MBTPS1Q14703 1052 aa17.63■□□□□ 0.41
PKP3-201ENST00000331563 RFTN2Q52LD8 501 aaPredicted RBP17.63■□□□□ 0.41
PKP3-201ENST00000331563 OR2T5Q6IEZ7 315 aa17.63■□□□□ 0.41
PKP3-201ENST00000331563 ANKRD53Q8N9V6 530 aa17.63■□□□□ 0.41
PKP3-201ENST00000331563 OR2T29Q8NH02 315 aa17.63■□□□□ 0.41
PKP3-201ENST00000331563 SCAMP5Q8TAC9 235 aa17.63■□□□□ 0.41
PKP3-201ENST00000331563 BLOC1S5Q8TDH9 187 aa17.63■□□□□ 0.41
PKP3-201ENST00000331563 MYDGFQ969H8 173 aa17.63■□□□□ 0.41
PKP3-201ENST00000331563 NECTIN4Q96NY8 510 aa17.63■□□□□ 0.41
PKP3-201ENST00000331563 TSEN34Q9BSV6 310 aaKnown RBP17.63■□□□□ 0.41
PKP3-201ENST00000331563 WASH6PQ9NQA3 447 aa17.63■□□□□ 0.41
PKP3-201ENST00000331563 PCTPQ9UKL6 214 aa17.63■□□□□ 0.41
PKP3-201ENST00000331563 IKZF3Q9UKT9 509 aa17.63■□□□□ 0.41
PKP3-201ENST00000331563 ERVW-1Q9UQF0 538 aa17.63■□□□□ 0.41
PKP3-201ENST00000331563 COMMD10Q9Y6G5 202 aa17.63■□□□□ 0.41
PKP3-201ENST00000331563 A0A0U1RQF3 1178 aa17.63■□□□□ 0.41
PKP3-201ENST00000331563 KIAA0513O60268 411 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms