RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 RDH14Q9HBH5 336 aa15.4■□□□□ 0.06
PDGFB-201ENST00000331163 CCDC177Q9NQR7 707 aaPredicted RBP15.4■□□□□ 0.06
PDGFB-201ENST00000331163 NDUFA13Q9P0J0 144 aa15.4■□□□□ 0.06
PDGFB-201ENST00000331163 MRASO14807 208 aa15.39■□□□□ 0.05
PDGFB-201ENST00000331163 MYO1DO94832 1006 aa15.39■□□□□ 0.05
PDGFB-201ENST00000331163 JUNDP17535 347 aa15.39■□□□□ 0.05
PDGFB-201ENST00000331163 BMP8BP34820 402 aa15.39■□□□□ 0.05
PDGFB-201ENST00000331163 CTBSQ01459 385 aa15.39■□□□□ 0.05
PDGFB-201ENST00000331163 TBCCQ15814 346 aa15.39■□□□□ 0.05
PDGFB-201ENST00000331163 KLHL35Q6PF15 583 aa15.39■□□□□ 0.05
PDGFB-201ENST00000331163 C17orf64Q86WR6 236 aa15.39■□□□□ 0.05
PDGFB-201ENST00000331163 SYT12Q8IV01 421 aa15.39■□□□□ 0.05
PDGFB-201ENST00000331163 KDM1BQ8NB78 822 aa15.39■□□□□ 0.05
PDGFB-201ENST00000331163 RAB7BQ96AH8 199 aa15.39■□□□□ 0.05
PDGFB-201ENST00000331163 SHDQ96IW2 340 aa15.39■□□□□ 0.05
PDGFB-201ENST00000331163 CROCCQ5TZA2 2017 aa15.39■□□□□ 0.05
PDGFB-201ENST00000331163 A0A1W2PQF6 199 aa15.39■□□□□ 0.05
PDGFB-201ENST00000331163 GLOD5A6NK44 160 aa15.39■□□□□ 0.05
PDGFB-201ENST00000331163 TBPL1P62380 186 aa15.39■□□□□ 0.05
PDGFB-201ENST00000331163 CDKL1Q00532 357 aa15.39■□□□□ 0.05
PDGFB-201ENST00000331163 MYBPC1Q00872 1141 aa15.39■□□□□ 0.05
PDGFB-201ENST00000331163 MACC1Q6ZN28 852 aa15.39■□□□□ 0.05
PDGFB-201ENST00000331163 P2RY12Q9H244 342 aa15.39■□□□□ 0.05
PDGFB-201ENST00000331163 DKK3Q9UBP4 350 aa15.39■□□□□ 0.05
PDGFB-201ENST00000331163 NDOR1Q9UHB4 597 aa15.39■□□□□ 0.05
PDGFB-201ENST00000331163 PAIP2BQ9ULR5 123 aaKnown RBP15.39■□□□□ 0.05
PDGFB-201ENST00000331163 EIF3LQ9Y262 564 aaKnown RBP15.39■□□□□ 0.05
PDGFB-201ENST00000331163 CPED1A4D0V7 1026 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 MT-ND1P03886 318 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 PRKAG1P54619 331 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 C21orf59P57076 290 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 RAB8AP61006 207 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 ATP1A4Q13733 1029 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 DEFB133Q30KQ1 61 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 MAVSQ7Z434 540 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 TECPR1Q7Z6L1 1165 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 CD244Q9BZW8 370 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 TRIT1Q9H3H1 467 aaKnown RBP15.38■□□□□ 0.05
PDGFB-201ENST00000331163 IL21RQ9HBE5 538 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 SOHLH2Q9NX45 425 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 COPG1Q9Y678 874 aaKnown RBP15.38■□□□□ 0.05
PDGFB-201ENST00000331163 ZNF860A6NHJ4 632 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 MAN2B1O00754 1011 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 ERAL1O75616 437 aaKnown RBP15.38■□□□□ 0.05
PDGFB-201ENST00000331163 ALPPL2P10696 532 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 AOC1P19801 751 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 TNFRSF4P43489 277 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 CXCL12P48061 93 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 ENTPD1P49961 510 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 TIAL1Q01085 375 aaKnown RBP eCLIP15.38■□□□□ 0.05
PDGFB-201ENST00000331163 DEFB110Q30KQ9 67 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 CACHD1Q5VU97 1274 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 CLVS1Q8IUQ0 354 aaPredicted RBP15.38■□□□□ 0.05
PDGFB-201ENST00000331163 GJD3Q8N144 294 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 FCRL4Q96PJ5 515 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 PKP2Q99959 881 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 PAIP1Q9H074 479 aaKnown RBP15.38■□□□□ 0.05
PDGFB-201ENST00000331163 SRMSQ9H3Y6 488 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 SLC32A1Q9H598 525 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 VTI1BQ9UEU0 232 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 PCTPQ9UKL6 214 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 SORCS3Q9UPU3 1222 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 SNX13Q9Y5W8 968 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 ARHGEF17Q96PE2 2063 aaPredicted RBP15.38■□□□□ 0.05
PDGFB-201ENST00000331163 ARID1BQ8NFD5 2236 aaPredicted RBP15.38■□□□□ 0.05
PDGFB-201ENST00000331163 QSOX1O00391 747 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 GSTA4O15217 222 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 KMOO15229 486 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 HNRNPA2B1P22626 353 aaKnown RBP15.38■□□□□ 0.05
PDGFB-201ENST00000331163 SEPHS1P49903 392 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 FBXO43Q4G163 708 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 OR1E3Q8WZA6 343 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 AHCYL2Q96HN2 611 aaKnown RBP15.38■□□□□ 0.05
PDGFB-201ENST00000331163 CCDC3Q9BQI4 270 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 SLC7A5P2Q9GIP4 190 aa15.38■□□□□ 0.05
PDGFB-201ENST00000331163 H7C0S8 307 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 C8GP07360 202 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 IGFALSP35858 605 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 UFM1P61960 85 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 LRRC32Q14392 662 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 ZNF621Q6ZSS3 439 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 ZNF554Q86TJ5 538 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 GIPC3Q8TF64 312 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 GAB3Q8WWW8 586 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 RHBDF1Q96CC6 855 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 CLIP3Q96DZ5 547 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 SORBS1Q9BX66 1292 aaKnown RBP15.37■□□□□ 0.05
PDGFB-201ENST00000331163 MMP17Q9ULZ9 603 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 ANKRD36A6QL64 1941 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 SLCO1B7G3V0H7 640 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 B3GALT4O96024 378 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 PVRP15151 417 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 KELP23276 732 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 GATAD2AQ86YP4 633 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 RBM12BQ8IXT5 1001 aaKnown RBP15.37■□□□□ 0.05
PDGFB-201ENST00000331163 TSPAN14Q8NG11 270 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 ACTRT2Q8TDY3 377 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 MAGEB10Q96LZ2 347 aaPredicted RBP15.37■□□□□ 0.05
PDGFB-201ENST00000331163 TMEM79Q9BSE2 394 aa15.37■□□□□ 0.05
PDGFB-201ENST00000331163 STN1Q9H668 368 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms