RNA–Protein interactions for RNA: ENST00000330843.8

RAB11FIP1-202, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene RAB11FIP1, Length 7,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-202ENST00000330843 MSI1O43347 362 aaKnown RBP12.47□□□□□ -0.41
RAB11FIP1-202ENST00000330843 CSTBP04080 98 aaKnown RBP12.47□□□□□ -0.41
RAB11FIP1-202ENST00000330843 CES1P23141 567 aa12.47□□□□□ -0.41
RAB11FIP1-202ENST00000330843 DLSTP36957 453 aa12.47□□□□□ -0.41
RAB11FIP1-202ENST00000330843 HERVK_113P63132 956 aa12.47□□□□□ -0.41
RAB11FIP1-202ENST00000330843 MC2RQ01718 297 aa12.47□□□□□ -0.41
RAB11FIP1-202ENST00000330843 MED27Q6P2C8 311 aa12.47□□□□□ -0.41
RAB11FIP1-202ENST00000330843 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.47□□□□□ -0.41
RAB11FIP1-202ENST00000330843 LRRC58Q96CX6 371 aa12.47□□□□□ -0.41
RAB11FIP1-202ENST00000330843 TRMOQ9BU70 441 aa12.47□□□□□ -0.41
RAB11FIP1-202ENST00000330843 HOXB6P17509 224 aaKnown RBP12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 DNAJA1P31689 397 aaKnown RBP12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 MAP2K4P45985 399 aa12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 TAS2R39P59534 338 aa12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 COX18Q8N8Q8 333 aa12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 OR6Q1Q8NGQ2 317 aa12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 MTERF1Q99551 399 aaKnown RBP12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 SLA2Q9H6Q3 261 aa12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 EVLQ9UI08 416 aaPredicted RBP12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 RNF6Q9Y252 685 aa12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 A0A0A6YYH2 397 aa12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 A6NJ64 397 aa12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 CLDN4O14493 209 aa12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 PAGE1O75459 146 aa12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 PRKACGP22612 351 aa12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 CBLP22681 906 aa12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 CCND3P30281 292 aaPredicted RBP12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 KANK2Q63ZY3 851 aa12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 FZD3Q9NPG1 666 aa12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 GTF2F2P13984 249 aa12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 MSX1P28360 303 aa12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 FCGRTP55899 365 aa12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 CYP27C1Q4G0S4 372 aa12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 MFSD5Q6N075 450 aa12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 NUP54Q7Z3B4 507 aa12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 IRF2BP2Q7Z5L9 587 aa12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 JOSD2Q8TAC2 188 aa12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 MFSD3Q96ES6 412 aa12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 SAMD10Q9BYL1 202 aa12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 DNAJC27Q9NZQ0 273 aa12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 PRR36Q9H6K5 1346 aa12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 HYKKA2RU49 373 aa12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 ALPPP05187 535 aa12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 COTL1Q14019 142 aa12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 C14orf28Q4W4Y0 310 aa12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 REPS2Q8NFH8 660 aa12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 SLC35G5Q96KT7 338 aa12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 CCDC106Q9BWC9 280 aa12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 LRFN1Q9P244 771 aa12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 PCDHGB7Q9Y5F8 929 aa12.46□□□□□ -0.41
RAB11FIP1-202ENST00000330843 GPR75-ASB3A0A0A6YYF3 556 aa12.46□□□□□ -0.42
RAB11FIP1-202ENST00000330843 RAD51DO75771 328 aa12.46□□□□□ -0.42
RAB11FIP1-202ENST00000330843 ANXA3P12429 323 aa12.46□□□□□ -0.42
RAB11FIP1-202ENST00000330843 EPCAMP16422 314 aa12.46□□□□□ -0.42
RAB11FIP1-202ENST00000330843 HDCP19113 662 aa12.46□□□□□ -0.42
RAB11FIP1-202ENST00000330843 GPR68Q15743 365 aa12.46□□□□□ -0.42
RAB11FIP1-202ENST00000330843 EXOC3L2Q2M3D2 409 aa12.46□□□□□ -0.42
RAB11FIP1-202ENST00000330843 ZNF792Q3KQV3 632 aa12.46□□□□□ -0.42
RAB11FIP1-202ENST00000330843 CNTNAP3BQ96NU0 1288 aa12.46□□□□□ -0.42
RAB11FIP1-202ENST00000330843 SEC61A2Q9H9S3 476 aa12.46□□□□□ -0.42
RAB11FIP1-202ENST00000330843 ARHGEF4Q9NR80 690 aa12.46□□□□□ -0.42
RAB11FIP1-202ENST00000330843 A0A1W2PPW3 197 aa12.46□□□□□ -0.42
RAB11FIP1-202ENST00000330843 CHRNB1P11230 501 aa12.46□□□□□ -0.42
RAB11FIP1-202ENST00000330843 PPP5CP53041 499 aa12.46□□□□□ -0.42
RAB11FIP1-202ENST00000330843 FAM122CQ6P4D5 195 aa12.46□□□□□ -0.42
RAB11FIP1-202ENST00000330843 GJD3Q8N144 294 aa12.46□□□□□ -0.42
RAB11FIP1-202ENST00000330843 PYROXD2Q8N2H3 581 aa12.46□□□□□ -0.42
RAB11FIP1-202ENST00000330843 SMG8Q8ND04 991 aaKnown RBP12.46□□□□□ -0.42
RAB11FIP1-202ENST00000330843 LPPQ93052 612 aa12.46□□□□□ -0.42
RAB11FIP1-202ENST00000330843 HSFY1Q96LI6 401 aa12.46□□□□□ -0.42
RAB11FIP1-202ENST00000330843 RTFDC1Q9BY42 306 aaPredicted RBP12.46□□□□□ -0.42
RAB11FIP1-202ENST00000330843 MIOSQ9NXC5 875 aa12.46□□□□□ -0.42
RAB11FIP1-202ENST00000330843 MS4A12Q9NXJ0 267 aa12.46□□□□□ -0.42
RAB11FIP1-202ENST00000330843 PLA2R1Q13018 1463 aa12.46□□□□□ -0.42
RAB11FIP1-202ENST00000330843 A0A096LPI6 279 aa12.46□□□□□ -0.42
RAB11FIP1-202ENST00000330843 ATG13O75143 517 aa12.46□□□□□ -0.42
RAB11FIP1-202ENST00000330843 CD48P09326 243 aa12.46□□□□□ -0.42
RAB11FIP1-202ENST00000330843 PRKCIP41743 596 aa12.46□□□□□ -0.42
RAB11FIP1-202ENST00000330843 SLC1A2P43004 574 aa12.46□□□□□ -0.42
RAB11FIP1-202ENST00000330843 CDK18Q07002 472 aa12.46□□□□□ -0.42
RAB11FIP1-202ENST00000330843 DSC3Q14574 896 aa12.46□□□□□ -0.42
RAB11FIP1-202ENST00000330843 ASTE1Q2TB18 679 aaPredicted RBP12.46□□□□□ -0.42
RAB11FIP1-202ENST00000330843 TICAM1Q8IUC6 712 aa12.46□□□□□ -0.42
RAB11FIP1-202ENST00000330843 KCTD15Q96SI1 283 aaPredicted RBP12.46□□□□□ -0.42
RAB11FIP1-202ENST00000330843 PCDHB18PQ96TA0 734 aa12.46□□□□□ -0.42
RAB11FIP1-202ENST00000330843 NFASCO94856 1347 aa12.45□□□□□ -0.42
RAB11FIP1-202ENST00000330843 NRCAMQ92823 1304 aa12.45□□□□□ -0.42
RAB11FIP1-202ENST00000330843 AFDNP55196 1824 aaKnown RBP12.45□□□□□ -0.42
RAB11FIP1-202ENST00000330843 AGPSO00116 658 aa12.45□□□□□ -0.42
RAB11FIP1-202ENST00000330843 FGF1P05230 155 aa12.45□□□□□ -0.42
RAB11FIP1-202ENST00000330843 DNASE1P24855 282 aa12.45□□□□□ -0.42
RAB11FIP1-202ENST00000330843 FOXN2P32314 431 aa12.45□□□□□ -0.42
RAB11FIP1-202ENST00000330843 HSD17B2P37059 387 aa12.45□□□□□ -0.42
RAB11FIP1-202ENST00000330843 NCS1P62166 190 aa12.45□□□□□ -0.42
RAB11FIP1-202ENST00000330843 GPR157Q5UAW9 335 aa12.45□□□□□ -0.42
RAB11FIP1-202ENST00000330843 CFAP77Q6ZQR2 320 aa12.45□□□□□ -0.42
RAB11FIP1-202ENST00000330843 PIGZQ86VD9 579 aa12.45□□□□□ -0.42
RAB11FIP1-202ENST00000330843 NR4A3Q92570 626 aa12.45□□□□□ -0.42
RAB11FIP1-202ENST00000330843 ZDHHC15Q96MV8 337 aa12.45□□□□□ -0.42
RAB11FIP1-202ENST00000330843 TAPBPLQ9BX59 468 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms