RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 CD97P48960 835 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 TLCD1Q96CP7 247 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 HMCESQ96FZ2 354 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 MIPEPQ99797 713 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 LGALS13Q9UHV8 139 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 AP1M2Q9Y6Q5 423 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 SLC15A1P46059 708 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 CLCN7P51798 805 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 EVX2Q03828 476 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 MEP1AQ16819 746 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 TRMT10BQ6PF06 316 aaKnown RBP7.73□□□□□ -1.17
CIITA-201ENST00000324288 CPA6Q8N4T0 437 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 SLC38A3Q99624 504 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 TRIM64BA6NI03 449 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 GPIP06744 558 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 VEGFAP15692 232 aaPredicted RBP7.73□□□□□ -1.17
CIITA-201ENST00000324288 PSMA6P60900 246 aaKnown RBP7.73□□□□□ -1.17
CIITA-201ENST00000324288 GRIK5Q16478 980 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 TREML2Q5T2D2 321 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 APOBEC3HQ6NTF7 200 aaKnown RBP7.73□□□□□ -1.17
CIITA-201ENST00000324288 HSDL2Q6YN16 418 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 BOLLQ8N9W6 283 aaKnown RBP7.73□□□□□ -1.17
CIITA-201ENST00000324288 LRRC58Q96CX6 371 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 MFSD3Q96ES6 412 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 CNDP2Q96KP4 475 aaKnown RBP7.73□□□□□ -1.17
CIITA-201ENST00000324288 CDK15Q96Q40 435 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 HCN3Q9P1Z3 774 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 COLEC10Q9Y6Z7 277 aa7.73□□□□□ -1.17
CIITA-201ENST00000324288 CKMT1AP12532 417 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 RBM34P42696 430 aaKnown RBP7.72□□□□□ -1.17
CIITA-201ENST00000324288 ZNF45Q02386 682 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 CLCQ05315 142 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 CACNG1Q06432 222 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 EEF1DP3Q658K8 133 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 UROC1Q96N76 676 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 OSBPL2Q9H1P3 480 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 ARL5AQ9Y689 179 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 CNOT1A5YKK6 2376 aaKnown RBP7.72□□□□□ -1.17
CIITA-201ENST00000324288 SPTAN1Q13813 2472 aaKnown RBP7.72□□□□□ -1.17
CIITA-201ENST00000324288 A0A1W2PPW3 197 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 CDK14O94921 469 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 HSD3B1P14060 373 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 GGT5P36269 586 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 CARD16Q5EG05 197 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 RBM18Q96H35 190 aaKnown RBP7.72□□□□□ -1.17
CIITA-201ENST00000324288 HSPA12BQ96MM6 686 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 CYTH4Q9UIA0 394 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 ZFP37Q9Y6Q3 630 aaPredicted RBP7.72□□□□□ -1.17
CIITA-201ENST00000324288 ABCA4P78363 2273 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 TNS2Q63HR2 1409 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 CYP11A1P05108 521 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 SLC7A1P30825 629 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 ZDHHC20Q5W0Z9 365 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 OTOP2Q7RTS6 562 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 GPR142Q7Z601 462 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 OR5AK3PQ8NH89 298 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 CPXM1Q96SM3 734 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 TMEM233B4DJY2 109 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 GNRH1P01148 92 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 SFTPBP07988 381 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 PRR5P85299 388 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 MAPK14Q16539 360 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 ECM1Q16610 540 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 PDSS2Q86YH6 399 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 MFSD2AQ8NA29 543 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 PROKR2Q8NFJ6 384 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 OR4C6Q8NH72 309 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 CSPG4P5Q96PW8 444 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 POT1Q9NUX5 634 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 SLC22A1O15245 554 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 B3GALT2O43825 422 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 GOT2P00505 430 aaKnown RBP7.72□□□□□ -1.17
CIITA-201ENST00000324288 RPS2P15880 293 aaKnown RBP7.72□□□□□ -1.17
CIITA-201ENST00000324288 PRKACGP22612 351 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 NR4A2P43354 598 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 WDR4P57081 412 aaKnown RBP7.72□□□□□ -1.17
CIITA-201ENST00000324288 CTC1Q2NKJ3 1217 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 ATAT1Q5SQI0 421 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 PLD5Q8N7P1 536 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 CPT1BQ92523 772 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 HAS1Q92839 578 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 PHOX2BQ99453 314 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 PPIL3Q9H2H8 161 aaKnown RBP7.72□□□□□ -1.17
CIITA-201ENST00000324288 XPNPEP1Q9NQW7 623 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 DISC1C4P0D8 188 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 TRAPPC6AO75865 159 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 ZNF823P16415 610 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 VAMP1P23763 118 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 DYRK1AQ13627 763 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 ZNF311Q5JNZ3 666 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 ZNF676Q8N7Q3 588 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 BANPQ8N9N5 519 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 TSNAXQ99598 290 aaKnown RBP7.72□□□□□ -1.17
CIITA-201ENST00000324288 TMEM134Q9H6X4 195 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 DUS2Q9NX74 493 aaKnown RBP7.72□□□□□ -1.17
CIITA-201ENST00000324288 PCDHGC4Q9Y5F7 938 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 CCKBRP32239 447 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 KCNJ5P48544 419 aa7.72□□□□□ -1.17
CIITA-201ENST00000324288 PRKD1Q15139 912 aaPredicted RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms