RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 GJB3O75712 270 aa12.4□□□□□ -0.42
DNMT3A-202ENST00000321117 AP2A2O94973 939 aa12.4□□□□□ -0.42
DNMT3A-202ENST00000321117 CPNE6O95741 557 aa12.4□□□□□ -0.42
DNMT3A-202ENST00000321117 OXSR1O95747 527 aaPredicted RBP12.4□□□□□ -0.42
DNMT3A-202ENST00000321117 CD40LGP29965 261 aa12.4□□□□□ -0.42
DNMT3A-202ENST00000321117 RYKP34925 604 aa12.4□□□□□ -0.42
DNMT3A-202ENST00000321117 SLC16A1P53985 500 aa12.4□□□□□ -0.42
DNMT3A-202ENST00000321117 CLDN8P56748 225 aa12.4□□□□□ -0.42
DNMT3A-202ENST00000321117 RPS3AP61247 264 aaKnown RBP12.4□□□□□ -0.42
DNMT3A-202ENST00000321117 TSTQ16762 297 aaKnown RBP12.4□□□□□ -0.42
DNMT3A-202ENST00000321117 FUT10Q6P4F1 479 aa12.4□□□□□ -0.42
DNMT3A-202ENST00000321117 Q6ZSR9 355 aa12.4□□□□□ -0.42
DNMT3A-202ENST00000321117 LRRC70Q7Z2Q7 622 aa12.4□□□□□ -0.42
DNMT3A-202ENST00000321117 TMPRSS11BQ86T26 416 aa12.4□□□□□ -0.42
DNMT3A-202ENST00000321117 METTL3Q86U44 580 aaKnown RBP12.4□□□□□ -0.42
DNMT3A-202ENST00000321117 HMGCLL1Q8TB92 370 aa12.4□□□□□ -0.42
DNMT3A-202ENST00000321117 C17orf50Q8WW18 174 aa12.4□□□□□ -0.42
DNMT3A-202ENST00000321117 GTF2H4Q92759 462 aa12.4□□□□□ -0.42
DNMT3A-202ENST00000321117 PLD4Q96BZ4 506 aa12.4□□□□□ -0.42
DNMT3A-202ENST00000321117 CMTM7Q96FZ5 175 aa12.4□□□□□ -0.42
DNMT3A-202ENST00000321117 MROQ9BYG7 248 aa12.4□□□□□ -0.42
DNMT3A-202ENST00000321117 NEK6Q9HC98 313 aa12.4□□□□□ -0.42
DNMT3A-202ENST00000321117 OARD1Q9Y530 152 aa12.4□□□□□ -0.42
DNMT3A-202ENST00000321117 A0A1W2PQ67 120 aa12.4□□□□□ -0.43
DNMT3A-202ENST00000321117 AQP9O43315 295 aa12.4□□□□□ -0.43
DNMT3A-202ENST00000321117 SNX4O95219 450 aa12.4□□□□□ -0.43
DNMT3A-202ENST00000321117 CLDN7O95471 211 aa12.4□□□□□ -0.43
DNMT3A-202ENST00000321117 VIPP01282 170 aa12.4□□□□□ -0.43
DNMT3A-202ENST00000321117 LRG1P02750 347 aa12.4□□□□□ -0.43
DNMT3A-202ENST00000321117 IGFBP6P24592 240 aaPredicted RBP12.4□□□□□ -0.43
DNMT3A-202ENST00000321117 HOXC13P31276 330 aa12.4□□□□□ -0.43
DNMT3A-202ENST00000321117 NKX2-5P52952 324 aaPredicted RBP12.4□□□□□ -0.43
DNMT3A-202ENST00000321117 ATN1P54259 1190 aaPredicted RBP12.4□□□□□ -0.43
DNMT3A-202ENST00000321117 SMIM11AP58511 58 aa12.4□□□□□ -0.43
DNMT3A-202ENST00000321117 VTCN1Q7Z7D3 282 aa12.4□□□□□ -0.43
DNMT3A-202ENST00000321117 OR6Q1Q8NGQ2 317 aa12.4□□□□□ -0.43
DNMT3A-202ENST00000321117 ZNF675Q8TD23 568 aa12.4□□□□□ -0.43
DNMT3A-202ENST00000321117 AP3S1Q92572 193 aa12.4□□□□□ -0.43
DNMT3A-202ENST00000321117 FAM120CQ9NX05 1096 aaKnown RBP12.4□□□□□ -0.43
DNMT3A-202ENST00000321117 ZNF451Q9Y4E5 1061 aa12.4□□□□□ -0.43
DNMT3A-202ENST00000321117 HNRNPCL2B2RXH8 293 aa12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 ZNF623O75123 536 aa12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 MAGEA11P43364 429 aa12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 C2orf80Q0P641 193 aa12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 FAM219BQ5XKK7 198 aa12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 OMA1Q96E52 524 aa12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 RNFT2Q96EX2 444 aa12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 TEFMQ96QE5 360 aaKnown RBP12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 ABCB9Q9NP78 766 aa12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 C11orf16Q9NQ32 467 aa12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 STARD7Q9NQZ5 370 aa12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 FARSBQ9NSD9 589 aaKnown RBP12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 ZNF282Q9UDV7 671 aaPredicted RBP12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 CORINQ9Y5Q5 1042 aa12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 ITGB1P05556 798 aa12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 URODP06132 367 aa12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 FUT4P22083 530 aa12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 BNC1Q01954 994 aa12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 RUNDC3AQ59EK9 446 aa12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 ZNF548Q8NEK5 533 aaPredicted RBP12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 UPF1Q92900 1129 aaKnown RBP eCLIP12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 IL4I1Q96RQ9 567 aa12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 SLC30A2Q9BRI3 323 aa12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 HTATIP2Q9BUP3 242 aa12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 SNX7Q9UNH6 387 aa12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 E2F3O00716 465 aa12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 HAT1O14929 419 aa12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 EOMESO95936 686 aa12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 PDYNP01213 254 aa12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 TNNI3P19429 210 aa12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 ZNF140P52738 457 aaPredicted RBP12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 ST3GAL4Q11206 333 aa12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 ZNF517Q6ZMY9 492 aaPredicted RBP12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 MBOAT1Q6ZNC8 495 aa12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 PAPD5Q8NDF8 572 aaKnown RBP12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 SMAD5Q99717 465 aaKnown RBP12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 MGME1Q9BQP7 344 aa12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 POLR2J2Q9GZM3 115 aaKnown RBP12.39□□□□□ -0.43
DNMT3A-202ENST00000321117 FAM240BA0A1B0GVZ2 78 aa12.38□□□□□ -0.43
DNMT3A-202ENST00000321117 MANSC4A6NHS7 340 aaPredicted RBP12.38□□□□□ -0.43
DNMT3A-202ENST00000321117 CHRM5P08912 532 aaPredicted RBP12.38□□□□□ -0.43
DNMT3A-202ENST00000321117 PIGAP37287 484 aa12.38□□□□□ -0.43
DNMT3A-202ENST00000321117 GANABQ14697 944 aaKnown RBP12.38□□□□□ -0.43
DNMT3A-202ENST00000321117 HKDC1Q2TB90 917 aa12.38□□□□□ -0.43
DNMT3A-202ENST00000321117 NOXRED1Q6NXP6 359 aa12.38□□□□□ -0.43
DNMT3A-202ENST00000321117 ZNF280BQ86YH2 543 aa12.38□□□□□ -0.43
DNMT3A-202ENST00000321117 TRAPPC5Q8IUR0 188 aa12.38□□□□□ -0.43
DNMT3A-202ENST00000321117 UBE2J2Q8N2K1 259 aa12.38□□□□□ -0.43
DNMT3A-202ENST00000321117 ADAMTS16Q8TE57 1224 aa12.38□□□□□ -0.43
DNMT3A-202ENST00000321117 GULP1Q9UBP9 304 aa12.38□□□□□ -0.43
DNMT3A-202ENST00000321117 LYVE1Q9Y5Y7 322 aa12.38□□□□□ -0.43
DNMT3A-202ENST00000321117 ANKRD31Q8N7Z5 1873 aa12.38□□□□□ -0.43
DNMT3A-202ENST00000321117 M0QZQ0 153 aa12.38□□□□□ -0.43
DNMT3A-202ENST00000321117 QSOX1O00391 747 aa12.38□□□□□ -0.43
DNMT3A-202ENST00000321117 DYRK3O43781 588 aa12.38□□□□□ -0.43
DNMT3A-202ENST00000321117 GSTM4Q03013 218 aa12.38□□□□□ -0.43
DNMT3A-202ENST00000321117 PGBD5Q8N414 524 aa12.38□□□□□ -0.43
DNMT3A-202ENST00000321117 VANGL1Q8TAA9 524 aaPredicted RBP12.38□□□□□ -0.43
DNMT3A-202ENST00000321117 EFHD2Q96C19 240 aaPredicted RBP12.38□□□□□ -0.43
DNMT3A-202ENST00000321117 CITED4Q96RK1 184 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms